Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047146
CDS Infomation

pacid=37440706 polypeptide=PGSC0003DMP400031888 locus=PGSC0003DMG400018292 ID=PGSC0003DMT400047146.v4.03 annot-version=v4.03
Sequence

ATGGAAACTTTCCTATTCACCTCCGAGTCTGTGAACGAGGGTCACCCAGACAAGCTCTGT
GATCAGATCTCTGATGCAGTTCTTGACGCCTGCCTTGAGCAAGATCCTGAGAGCAAAGTT
GCATGTGAAACTTGCACCAAGACCAACTTGGTCATGGTCTTTGGTGAGATCACGACCAAG
GCTATTGTAGACTATGAGAAGATTGTGCGTGACACATGCCGTAATATTGGATTTGTTTCT
GATGATGTTGGTCTTGATGCTGATAACTGCAAGGTCCTTGTTTACATTGAGCAGCAAAGT
CCTGATATTGCTCAAGGTGTCCACGGCCATCTGACCAAACGCCCCGAGGAGATTGGTGCT
GGTGACCAGGGTCACATGTTTGGCTATGCCACCGATGAGACCCCTGAATTAATGCCTCTC
AGTCACGTGCTTGCAACTAAACTTGGTGCCCGCCTTACAGAAGTCCGCAAGAATGGCACC
TGCCCCTGGTTGAGGCCTGATGGCAAAACTCAAGTTACTGTTGAGTATTGCAATGACAAT
GGTGCCATGATTCCAATTAAGGTACACACTGTTCTTATCTCCACCCAACACGATGAGACC
GTTACAAATGATGAGATTGCCCGCGACCTTAAGGAGCATGTCATCAAGCCAGTCATCCCA
GAGAAGTACCTTGACGAGAAGACAATCTTCCACCTTAACCCATCTGGCCGATTTGTTATT
GGTGGACCTCATGGTGATGCTGGTCTCACTGGTCGTAAAATCATCATTGACACATATGGT
GGTTGGGGTGCTCATGGTGGTGGTGCTTTCTCGGGCAAGGACCCAACCAAGGTTGACAGG
AGTGGTGCATACATCGTAAGGCAAGCTGCAAAGAGTATTGTAGCTAGTGGACTCGCTCGC
AGATGCATCGTGCAGGTTTCTTATGCCATCGGTGTGCCTGAGCCATTGTCTGTATTTGTT
GACACCTATGGCACTGGAAAGATCCCCGACAAGGAAATTTTGAAGATCGTTAAGGAGAAC
TTCGACTTCAGACCTGGAATGATGTCCATTAACTTGGATTTGAAGAGGGGTGGCAATGGA
AGATTCTTGAAAACTGCTGCCTATGGTCACTTTGGACGTGATGACCCCGATTTCACATGG
GAAGTTGTCAAGCCCCTCAAGTGGGAAAAGCCCCAAGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031888
PEP Infomation

pacid=37440706 transcript=PGSC0003DMT400047146 locus=PGSC0003DMG400018292 ID=PGSC0003DMT400047146.v4.03 annot-version=v4.03
Sequence

METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTK
AIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGA
GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYCNDN
GAMIPIKVHTVLISTQHDETVTNDEIARDLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVI
GGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLAR
RCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMSINLDLKRGGNG
RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQD*

Transcript Sequence

Transcript ID

PGSC0003DMT400047146
Transcript Infomation

pacid=37440706 locus=PGSC0003DMG400018292 ID=PGSC0003DMT400047146.v4.03 annot-version=v4.03
Sequence

ATGGAAACTTTCCTATTCACCTCCGAGTCTGTGAACGAGGGTCACCCAGACAAGCTCTGT
GATCAGATCTCTGATGCAGTTCTTGACGCCTGCCTTGAGCAAGATCCTGAGAGCAAAGTT
GCATGTGAAACTTGCACCAAGACCAACTTGGTCATGGTCTTTGGTGAGATCACGACCAAG
GCTATTGTAGACTATGAGAAGATTGTGCGTGACACATGCCGTAATATTGGATTTGTTTCT
GATGATGTTGGTCTTGATGCTGATAACTGCAAGGTCCTTGTTTACATTGAGCAGCAAAGT
CCTGATATTGCTCAAGGTGTCCACGGCCATCTGACCAAACGCCCCGAGGAGATTGGTGCT
GGTGACCAGGGTCACATGTTTGGCTATGCCACCGATGAGACCCCTGAATTAATGCCTCTC
AGTCACGTGCTTGCAACTAAACTTGGTGCCCGCCTTACAGAAGTCCGCAAGAATGGCACC
TGCCCCTGGTTGAGGCCTGATGGCAAAACTCAAGTTACTGTTGAGTATTGCAATGACAAT
GGTGCCATGATTCCAATTAAGGTACACACTGTTCTTATCTCCACCCAACACGATGAGACC
GTTACAAATGATGAGATTGCCCGCGACCTTAAGGAGCATGTCATCAAGCCAGTCATCCCA
GAGAAGTACCTTGACGAGAAGACAATCTTCCACCTTAACCCATCTGGCCGATTTGTTATT
GGTGGACCTCATGGTGATGCTGGTCTCACTGGTCGTAAAATCATCATTGACACATATGGT
GGTTGGGGTGCTCATGGTGGTGGTGCTTTCTCGGGCAAGGACCCAACCAAGGTTGACAGG
AGTGGTGCATACATCGTAAGGCAAGCTGCAAAGAGTATTGTAGCTAGTGGACTCGCTCGC
AGATGCATCGTGCAGGTTTCTTATGCCATCGGTGTGCCTGAGCCATTGTCTGTATTTGTT
GACACCTATGGCACTGGAAAGATCCCCGACAAGGAAATTTTGAAGATCGTTAAGGAGAAC
TTCGACTTCAGACCTGGAATGATGTCCATTAACTTGGATTTGAAGAGGGGTGGCAATGGA
AGATTCTTGAAAACTGCTGCCTATGGTCACTTTGGACGTGATGACCCCGATTTCACATGG
GAAGTTGTCAAGCCCCTCAAGTGGGAAAAGCCCCAAGACTAA