Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047132
CDS Infomation

pacid=37438785 polypeptide=PGSC0003DMP400031880 locus=PGSC0003DMG400018288 ID=PGSC0003DMT400047132.v4.03 annot-version=v4.03
Sequence

ATGGGTGGTGCAGGGGGAAACGGGAACGGTGGAGGGGGAGGACCGCAGCCGTCGGGTGCG
GCTGAGGCGCTGTACTCGGCGGCGAGGATTTCGGTATGGTGGGATATAGAAAACTGTCAA
GTACCTAGAGGATCTGATCCTCATGCGATCGCTCAGAATATAAGTTCTGCGCTTGTGAAT
ATGAACTACTGTGGACCGGTTTCTATTTCCGCTTACGGTGATACAACTAAGATCTCTTCT
TCTGTTCAGCAGGCGCTTAATAGTACTGGAATCGGCCTTAATCACGTTCCGGCAGGTGTC
AAAGATGCAAGTGATAAGAAGATTCTTGTGGACATGTTATTCTGGGCAGTTGACAATCCT
GCACCTGCTAACTATTTGTTGATTTCGGGAGATCGTGATTTTTCAAACGCACTTCATCAA
TTGCGCATGCGCAGATATAATATTCTTCTCGCACAACCTCAAAAAGCTTCTGTTCCCCTT
GTTGCTGCTGCGAAGACTGTATGGCTCTGGACAAGCCTTTCATCTGGAGGACCGCCTCTC
ACAAATAGTGAATCAAGTCAACTTGTAAATAGCAGCTACGGTTCTTTACCCACTTTAGAC
GCATTATCAACGTCGTCTAGTGACTCCAGCCTGATAAACCAGCTTGACTCTTTCCATGAA
AACCCGCAAATGAAGTTTAACAATTTGGGAAGGGGTACAGATATTAAGCAGAAGGGCAAA
CCAGTTCGTAGAAGTGTGAATCAACCCAATATATCACGAACTTCATCTGGCACACAAGAA
AATCATAGTGCTGCAAACTTTCATCAACCAGGATATGGATATCCTAAGCAGTTCAATGAT
TCAGTGGAGTTACCTGGAGCTCATAATTCAAGAACTCCTTTCAGTGGGCCTGTACCAAGC
GGTGTTCCTGGTAATCCTGAGCCATCCTGGACGAATGGAAACAACTCACAGAACAATTAT
CAAAACAATTATCCTCCAGGAAGGCCAAACAACCTCCCAGTATCACCGGTAATTCCACCT
GGTAATTTCTTACCACCTAATTCGCATGTGCATCATTCACATTCAATGCCTCCTAGGTCT
GATGCAATTGGCTACACCTCAGGCCCTCAAATATCTATGCCTGATATGGGTAAGCTAAAA
GTCAGTGAAAACTCCAATAATGGTCATAATCGTCCTTTTTCTCAAACGTGGAATGGAGAA
TCGAGACAACCTCCTAACATCGAGAATTCTTATACAAATACAAATGGGCCTCATAAAGGA
CACAATTTGCAGAAGAAAACACCATTTTACGTTGAAAAAGAGGTAAACAGGTATCCACAT
CCCAGCCCTGAGATTCCACCACCGTCATCTATAGCAAATAGCAGTAATGGACCTCTCAAT
GGTGTGTGGGGAGCTCCAGGATGCCCAAAACCTTCTGATTATGTTCAAGGCCTTATTGGA
GTCGTTTTACTTGCATTGAACACCCTTAAAACTGAGAAGATTATGCCTACTGAAGCAAAC
ATCTCTGATTGCATCAAATATGGAGATCCAAAACACCGCAATACTGATGTTAAGAAGGCT
CTCGCGAGTGCAGTTGAACAACAGCTGGTAGTAACACGGAATTTAGGTGCTTTGCAATTA
TATGTTGGTAAAAATGAGAACCTATGGAGGTGTGTGAATCCCATTGGTGGTAATATGAAA
CAATATCCCAAAGAAGCATGGGATGACCTCCAGAAATTTCTGTCATCTTCTGCCGGACGA
GCCGCCATAAGCGCTACTCAGTGCAGGTTTGAAGCAGCAACAGTTATTAAGAAAATGTGC
TTAAAGGAGCTTGCTTTAGGCGAAATACTTCAGATCTTGCACATGGTTGTTAACATGAAG
AAATGGCTTGTACAACCTCAATCCGGATGGCAACCAATTAAGTTTACTCTCGCAGAGATC
GTCCCCGATTCAGGGGTGGTAGCTGCGACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400031880
PEP Infomation

pacid=37438785 transcript=PGSC0003DMT400047132 locus=PGSC0003DMG400018288 ID=PGSC0003DMT400047132.v4.03 annot-version=v4.03
Sequence

MGGAGGNGNGGGGGPQPSGAAEALYSAARISVWWDIENCQVPRGSDPHAIAQNISSALVN
MNYCGPVSISAYGDTTKISSSVQQALNSTGIGLNHVPAGVKDASDKKILVDMLFWAVDNP
APANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASVPLVAAAKTVWLWTSLSSGGPPL
TNSESSQLVNSSYGSLPTLDALSTSSSDSSLINQLDSFHENPQMKFNNLGRGTDIKQKGK
PVRRSVNQPNISRTSSGTQENHSAANFHQPGYGYPKQFNDSVELPGAHNSRTPFSGPVPS
GVPGNPEPSWTNGNNSQNNYQNNYPPGRPNNLPVSPVIPPGNFLPPNSHVHHSHSMPPRS
DAIGYTSGPQISMPDMGKLKVSENSNNGHNRPFSQTWNGESRQPPNIENSYTNTNGPHKG
HNLQKKTPFYVEKEVNRYPHPSPEIPPPSSIANSSNGPLNGVWGAPGCPKPSDYVQGLIG
VVLLALNTLKTEKIMPTEANISDCIKYGDPKHRNTDVKKALASAVEQQLVVTRNLGALQL
YVGKNENLWRCVNPIGGNMKQYPKEAWDDLQKFLSSSAGRAAISATQCRFEAATVIKKMC
LKELALGEILQILHMVVNMKKWLVQPQSGWQPIKFTLAEIVPDSGVVAAT*

Transcript Sequence

Transcript ID

PGSC0003DMT400047132
Transcript Infomation

pacid=37438785 locus=PGSC0003DMG400018288 ID=PGSC0003DMT400047132.v4.03 annot-version=v4.03
Sequence

ATGGGTGGTGCAGGGGGAAACGGGAACGGTGGAGGGGGAGGACCGCAGCCGTCGGGTGCG
GCTGAGGCGCTGTACTCGGCGGCGAGGATTTCGGTATGGTGGGATATAGAAAACTGTCAA
GTACCTAGAGGATCTGATCCTCATGCGATCGCTCAGAATATAAGTTCTGCGCTTGTGAAT
ATGAACTACTGTGGACCGGTTTCTATTTCCGCTTACGGTGATACAACTAAGATCTCTTCT
TCTGTTCAGCAGGCGCTTAATAGTACTGGAATCGGCCTTAATCACGTTCCGGCAGGTGTC
AAAGATGCAAGTGATAAGAAGATTCTTGTGGACATGTTATTCTGGGCAGTTGACAATCCT
GCACCTGCTAACTATTTGTTGATTTCGGGAGATCGTGATTTTTCAAACGCACTTCATCAA
TTGCGCATGCGCAGATATAATATTCTTCTCGCACAACCTCAAAAAGCTTCTGTTCCCCTT
GTTGCTGCTGCGAAGACTGTATGGCTCTGGACAAGCCTTTCATCTGGAGGACCGCCTCTC
ACAAATAGTGAATCAAGTCAACTTGTAAATAGCAGCTACGGTTCTTTACCCACTTTAGAC
GCATTATCAACGTCGTCTAGTGACTCCAGCCTGATAAACCAGCTTGACTCTTTCCATGAA
AACCCGCAAATGAAGTTTAACAATTTGGGAAGGGGTACAGATATTAAGCAGAAGGGCAAA
CCAGTTCGTAGAAGTGTGAATCAACCCAATATATCACGAACTTCATCTGGCACACAAGAA
AATCATAGTGCTGCAAACTTTCATCAACCAGGATATGGATATCCTAAGCAGTTCAATGAT
TCAGTGGAGTTACCTGGAGCTCATAATTCAAGAACTCCTTTCAGTGGGCCTGTACCAAGC
GGTGTTCCTGGTAATCCTGAGCCATCCTGGACGAATGGAAACAACTCACAGAACAATTAT
CAAAACAATTATCCTCCAGGAAGGCCAAACAACCTCCCAGTATCACCGGTAATTCCACCT
GGTAATTTCTTACCACCTAATTCGCATGTGCATCATTCACATTCAATGCCTCCTAGGTCT
GATGCAATTGGCTACACCTCAGGCCCTCAAATATCTATGCCTGATATGGGTAAGCTAAAA
GTCAGTGAAAACTCCAATAATGGTCATAATCGTCCTTTTTCTCAAACGTGGAATGGAGAA
TCGAGACAACCTCCTAACATCGAGAATTCTTATACAAATACAAATGGGCCTCATAAAGGA
CACAATTTGCAGAAGAAAACACCATTTTACGTTGAAAAAGAGGTAAACAGGTATCCACAT
CCCAGCCCTGAGATTCCACCACCGTCATCTATAGCAAATAGCAGTAATGGACCTCTCAAT
GGTGTGTGGGGAGCTCCAGGATGCCCAAAACCTTCTGATTATGTTCAAGGCCTTATTGGA
GTCGTTTTACTTGCATTGAACACCCTTAAAACTGAGAAGATTATGCCTACTGAAGCAAAC
ATCTCTGATTGCATCAAATATGGAGATCCAAAACACCGCAATACTGATGTTAAGAAGGCT
CTCGCGAGTGCAGTTGAACAACAGCTGGTAGTAACACGGAATTTAGGTGCTTTGCAATTA
TATGTTGGTAAAAATGAGAACCTATGGAGGTGTGTGAATCCCATTGGTGGTAATATGAAA
CAATATCCCAAAGAAGCATGGGATGACCTCCAGAAATTTCTGTCATCTTCTGCCGGACGA
GCCGCCATAAGCGCTACTCAGTGCAGGTTTGAAGCAGCAACAGTTATTAAGAAAATGTGC
TTAAAGGAGCTTGCTTTAGGCGAAATACTTCAGATCTTGCACATGGTTGTTAACATGAAG
AAATGGCTTGTACAACCTCAATCCGGATGGCAACCAATTAAGTTTACTCTCGCAGAGATC
GTCCCCGATTCAGGGGTGGTAGCTGCGACATAA