Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047088
CDS Infomation

pacid=37441101 polypeptide=PGSC0003DMP400031856 locus=PGSC0003DMG400018283 ID=PGSC0003DMT400047088.v4.03 annot-version=v4.03
Sequence

ATGGAAAAGAAGCATCTATGTGCTGCTCTTCTTTTATGGGCCATTGCTTGCTCTGCACTT
CCTGCTTCCTCTGGTGATTTGCTTAGAATTGGTTTGAAGAAGCACCGCTTGGACGTTAAT
AGCATAAAAGCTGCAAGAGTAGCCAAACTACAAGATAGATACGGGAAGCATGTGAATGGC
ATTGAAAAGAAATCGAGTGACTCAGATATCGATATAGTCCCCTTAAAGAACTACTTGGAT
GCCCAATACTATGGAGAGATTGGTATTGGTTCACCTCCTCAGAAATTCAAAATTATCTTT
GATACTGGGAGTTCTAACCTCTGGGTTCCATCATCAAAATGCTATTTCTCTATTGCATGC
TGGATCCACTCCAAGTACAAGGCGAGCAAATCCAGTACATATACAAGAGATGGGGAATCT
TGCTCAATCCGTTATGGAACTGGATCAATCTCTGGCCATTTCAGTATGGACAATGTTCAA
GTTGGTGATCTTGTAGTTAAAGATCAGGTGTTTATTGAGGCGACACGAGAACCTAGTATT
ACATTTATAGTTGCAAAGTTTGATGGTATACTAGGCCTTGGTTTCCAGGAAATTTCTGTT
GGAAATACTACACCTGTCTGGTACAATATGGTGGGGCAAGGTCTTGTTAAAGAGCCAGTC
TTCTCTTTCTGGTTTAACCGTGATGCAAATGCAAAAGAGGGAGGTGAACTTGTTTTTGGT
GGAGTTGATCCAAAGCACTTCAAGGGTAATCATACTTATGTTCCGTTGACTCAGAAGGGC
TACTGGCAGTTTAATATGGGAGATTTCCTTATCGGGAACACATCAACAGGTTATTGTGCA
GGTGGCTGTGCTGCTATTGTGGATTCTGGAACATCACTGCTTGCTGGTCCAACAACTATC
GTGACACAAATCAACCATGCCATTGGAGCAGAAGGAATAGTTAGCATGGAATGTAAAACT
ATTGTTTCACAGTATGGAGAGATGATCTGGGACTTACTAGTATCAGGGGTAAGACCTGAT
CAAGTTTGTTCACAAGCAGGTTTATGCTTTGTTGATGGAGCTCAGCATGTGAGCTCTAAT
ATCAGAACTGTAGTTGAAAGGGAAACTGAAGGAAGTTCTGTTGGTGAAGCACCATTATGC
ACTGCCTGTGAGATGGCAGTTGTTTGGATGCAAAACCAGCTCAAACAAAAAGGGACAAAA
GAGAAAGTGTTAGAGTATGTGAATCAGCTTTGTGAGAAAATACCAAGTCCAATGGGAGAA
TCCGCAATCGACTGTAACAGCATCTCATCCATGCCAGATATTACATTCACTATCAAAGAT
AAAGCTTTTGTGCTTACTCCAGAACAGTATATTCTTAAAACTGGAGAAGGGGTTGCGACA
ATTTGTGTCAGTGGATTTGCTGCTCTGGATGTGCCACCACCTCGCGGTCCTCTTTGGATT
CTTGGAGATGTATTCATGGGGCCGTATCACACTGTGTTTGACTATGGTAAATCCCAAGTG
GGTTTTGCTGAAGCTGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400031856
PEP Infomation

pacid=37441101 transcript=PGSC0003DMT400047088 locus=PGSC0003DMG400018283 ID=PGSC0003DMT400047088.v4.03 annot-version=v4.03
Sequence

MEKKHLCAALLLWAIACSALPASSGDLLRIGLKKHRLDVNSIKAARVAKLQDRYGKHVNG
IEKKSSDSDIDIVPLKNYLDAQYYGEIGIGSPPQKFKIIFDTGSSNLWVPSSKCYFSIAC
WIHSKYKASKSSTYTRDGESCSIRYGTGSISGHFSMDNVQVGDLVVKDQVFIEATREPSI
TFIVAKFDGILGLGFQEISVGNTTPVWYNMVGQGLVKEPVFSFWFNRDANAKEGGELVFG
GVDPKHFKGNHTYVPLTQKGYWQFNMGDFLIGNTSTGYCAGGCAAIVDSGTSLLAGPTTI
VTQINHAIGAEGIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSN
IRTVVERETEGSSVGEAPLCTACEMAVVWMQNQLKQKGTKEKVLEYVNQLCEKIPSPMGE
SAIDCNSISSMPDITFTIKDKAFVLTPEQYILKTGEGVATICVSGFAALDVPPPRGPLWI
LGDVFMGPYHTVFDYGKSQVGFAEAA*

Transcript Sequence

Transcript ID

PGSC0003DMT400047088
Transcript Infomation

pacid=37441101 locus=PGSC0003DMG400018283 ID=PGSC0003DMT400047088.v4.03 annot-version=v4.03
Sequence

ATGGAAAAGAAGCATCTATGTGCTGCTCTTCTTTTATGGGCCATTGCTTGCTCTGCACTT
CCTGCTTCCTCTGGTGATTTGCTTAGAATTGGTTTGAAGAAGCACCGCTTGGACGTTAAT
AGCATAAAAGCTGCAAGAGTAGCCAAACTACAAGATAGATACGGGAAGCATGTGAATGGC
ATTGAAAAGAAATCGAGTGACTCAGATATCGATATAGTCCCCTTAAAGAACTACTTGGAT
GCCCAATACTATGGAGAGATTGGTATTGGTTCACCTCCTCAGAAATTCAAAATTATCTTT
GATACTGGGAGTTCTAACCTCTGGGTTCCATCATCAAAATGCTATTTCTCTATTGCATGC
TGGATCCACTCCAAGTACAAGGCGAGCAAATCCAGTACATATACAAGAGATGGGGAATCT
TGCTCAATCCGTTATGGAACTGGATCAATCTCTGGCCATTTCAGTATGGACAATGTTCAA
GTTGGTGATCTTGTAGTTAAAGATCAGGTGTTTATTGAGGCGACACGAGAACCTAGTATT
ACATTTATAGTTGCAAAGTTTGATGGTATACTAGGCCTTGGTTTCCAGGAAATTTCTGTT
GGAAATACTACACCTGTCTGGTACAATATGGTGGGGCAAGGTCTTGTTAAAGAGCCAGTC
TTCTCTTTCTGGTTTAACCGTGATGCAAATGCAAAAGAGGGAGGTGAACTTGTTTTTGGT
GGAGTTGATCCAAAGCACTTCAAGGGTAATCATACTTATGTTCCGTTGACTCAGAAGGGC
TACTGGCAGTTTAATATGGGAGATTTCCTTATCGGGAACACATCAACAGGTTATTGTGCA
GGTGGCTGTGCTGCTATTGTGGATTCTGGAACATCACTGCTTGCTGGTCCAACAACTATC
GTGACACAAATCAACCATGCCATTGGAGCAGAAGGAATAGTTAGCATGGAATGTAAAACT
ATTGTTTCACAGTATGGAGAGATGATCTGGGACTTACTAGTATCAGGGGTAAGACCTGAT
CAAGTTTGTTCACAAGCAGGTTTATGCTTTGTTGATGGAGCTCAGCATGTGAGCTCTAAT
ATCAGAACTGTAGTTGAAAGGGAAACTGAAGGAAGTTCTGTTGGTGAAGCACCATTATGC
ACTGCCTGTGAGATGGCAGTTGTTTGGATGCAAAACCAGCTCAAACAAAAAGGGACAAAA
GAGAAAGTGTTAGAGTATGTGAATCAGCTTTGTGAGAAAATACCAAGTCCAATGGGAGAA
TCCGCAATCGACTGTAACAGCATCTCATCCATGCCAGATATTACATTCACTATCAAAGAT
AAAGCTTTTGTGCTTACTCCAGAACAGTATATTCTTAAAACTGGAGAAGGGGTTGCGACA
ATTTGTGTCAGTGGATTTGCTGCTCTGGATGTGCCACCACCTCGCGGTCCTCTTTGGATT
CTTGGAGATGTATTCATGGGGCCGTATCACACTGTGTTTGACTATGGTAAATCCCAAGTG
GGTTTTGCTGAAGCTGCATAA