Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047058
CDS Infomation

pacid=37438709 polypeptide=PGSC0003DMP400031832 locus=PGSC0003DMG400018273 ID=PGSC0003DMT400047058.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTTCAAGAGCTCTCAATTTCTGCAGGAGCTTTTCCACAGTTTCTTCCGAACCA
TTACGTGTTTGCATCGTGGGGAGCGGGCCTGCTGGGTTCTACACTGCCGATAAGATTTTG
AAAGCTCACGAGGGAGCTGAAGTTGATATAGTTGATCGGTTACCTACGCCATTTGGATTA
GTCAGGTCCGGAGTGGCTCCTGATCATCCTGAAACAAAGATTGTGACGAACCAGTTTTCT
CGGGTTGCTCAAAATAGACGTTGCTCGTTCATTGGGAATGTCTCTCTTGGAGCCTCTATA
TCTTTGGCTGAGCTGCGTGAATTATATGATGCGGTGGTGCTTTCTTATGGAGCTGAAAGT
GATCAAGCTCTAGGAATACCCAGAGAAGATCTGTCTGGGATATACGCTGCCAGAGAATTT
GTTTGGTGGTATAATGGCCACCCAGACTGCCGAAATCTGGCACCAGATTTGAAGAGCTCC
GATACTGCTGTTATTATTGGTCAGGGAAATGTAGCTCTTGATGTGGCGCGTATCCTTTTA
CGACCAACTAGTGAATTGGCAACAACTGATATCTCCTGCCATGCTTTGGCAGCTTTAAGT
GAGAGCTCCATTAGAAAAGTGTATTTGGTTGGAAGACGTGGAGCAGCACAAGCAGCCTTC
ACGGCGAAAGAACTGCGTGAAGTTCTACGTATCAAGGACCTATCCATTGAAATTCGGGAA
GCGGATTTAAGTAAAACCCCAGCAGATGAGGAAGAACTAAAGAATAACCGGATTAAAAGG
AGAATTCATGAACTGCTCTCTAAGGCAGCCACTCCTGCAACTTCCGTATGCAATCCAGGT
CAAAAAGAACTGCACTTTGTTTTCTTCAGGAAACCAGACAGGTTCCTGGAATCAGATTGT
AGAAGTGGTCATGTTGCTGGTTTGCGGGTGGAGAGGACAATTCTTAAAGAAGATGTTGGC
TCTGGGAAACAAATTGCAGTTGGTACTGGACTTTTTGAAGAAATGAAATGCGGGCTGGTA
TTGAAGAGTGTTGGTTACAAGTCGATACCTGTTGATGGCTTGCCTTTTGATCACCGTAAA
GGTATTGTTCCAAATGTTCGGGGACGTGTGTTAAGTGAAGCTTCTGAAGATGCACAAGTC
GAGAAAGGCTTGTATGTATGTGGGTGGTTGAAGAGAGGACCAACTGGGATAATTGCTACA
AATCTTTACTGTGCTGAAGAAACTGTCGCTAGCATATCAGAAGATGTTGAGAGAGGAGTG
GTAACATCAAGATCTGGCTTATCTAAGCCCGGAAGGGAGGGCCTCCTCCAATTGCTAGAT
AGCAGGAATGTCAAAATTGTTCCATTTGGTGGCTGGGAAAAGATAGACAGTGAAGAGAAA
AGAAGAGGTAGTCTGAAAAACAAACCCAGGGAAAAGCTTACCTCTTGGCAGGATTTATTA
GAAGTTGCCACCAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031832
PEP Infomation

pacid=37438709 transcript=PGSC0003DMT400047058 locus=PGSC0003DMG400018273 ID=PGSC0003DMT400047058.v4.03 annot-version=v4.03
Sequence

MALSRALNFCRSFSTVSSEPLRVCIVGSGPAGFYTADKILKAHEGAEVDIVDRLPTPFGL
VRSGVAPDHPETKIVTNQFSRVAQNRRCSFIGNVSLGASISLAELRELYDAVVLSYGAES
DQALGIPREDLSGIYAAREFVWWYNGHPDCRNLAPDLKSSDTAVIIGQGNVALDVARILL
RPTSELATTDISCHALAALSESSIRKVYLVGRRGAAQAAFTAKELREVLRIKDLSIEIRE
ADLSKTPADEEELKNNRIKRRIHELLSKAATPATSVCNPGQKELHFVFFRKPDRFLESDC
RSGHVAGLRVERTILKEDVGSGKQIAVGTGLFEEMKCGLVLKSVGYKSIPVDGLPFDHRK
GIVPNVRGRVLSEASEDAQVEKGLYVCGWLKRGPTGIIATNLYCAEETVASISEDVERGV
VTSRSGLSKPGREGLLQLLDSRNVKIVPFGGWEKIDSEEKRRGSLKNKPREKLTSWQDLL
EVATK*

Transcript Sequence

Transcript ID

PGSC0003DMT400047058
Transcript Infomation

pacid=37438709 locus=PGSC0003DMG400018273 ID=PGSC0003DMT400047058.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTTCAAGAGCTCTCAATTTCTGCAGGAGCTTTTCCACAGTTTCTTCCGAACCA
TTACGTGTTTGCATCGTGGGGAGCGGGCCTGCTGGGTTCTACACTGCCGATAAGATTTTG
AAAGCTCACGAGGGAGCTGAAGTTGATATAGTTGATCGGTTACCTACGCCATTTGGATTA
GTCAGGTCCGGAGTGGCTCCTGATCATCCTGAAACAAAGATTGTGACGAACCAGTTTTCT
CGGGTTGCTCAAAATAGACGTTGCTCGTTCATTGGGAATGTCTCTCTTGGAGCCTCTATA
TCTTTGGCTGAGCTGCGTGAATTATATGATGCGGTGGTGCTTTCTTATGGAGCTGAAAGT
GATCAAGCTCTAGGAATACCCAGAGAAGATCTGTCTGGGATATACGCTGCCAGAGAATTT
GTTTGGTGGTATAATGGCCACCCAGACTGCCGAAATCTGGCACCAGATTTGAAGAGCTCC
GATACTGCTGTTATTATTGGTCAGGGAAATGTAGCTCTTGATGTGGCGCGTATCCTTTTA
CGACCAACTAGTGAATTGGCAACAACTGATATCTCCTGCCATGCTTTGGCAGCTTTAAGT
GAGAGCTCCATTAGAAAAGTGTATTTGGTTGGAAGACGTGGAGCAGCACAAGCAGCCTTC
ACGGCGAAAGAACTGCGTGAAGTTCTACGTATCAAGGACCTATCCATTGAAATTCGGGAA
GCGGATTTAAGTAAAACCCCAGCAGATGAGGAAGAACTAAAGAATAACCGGATTAAAAGG
AGAATTCATGAACTGCTCTCTAAGGCAGCCACTCCTGCAACTTCCGTATGCAATCCAGGT
CAAAAAGAACTGCACTTTGTTTTCTTCAGGAAACCAGACAGGTTCCTGGAATCAGATTGT
AGAAGTGGTCATGTTGCTGGTTTGCGGGTGGAGAGGACAATTCTTAAAGAAGATGTTGGC
TCTGGGAAACAAATTGCAGTTGGTACTGGACTTTTTGAAGAAATGAAATGCGGGCTGGTA
TTGAAGAGTGTTGGTTACAAGTCGATACCTGTTGATGGCTTGCCTTTTGATCACCGTAAA
GGTATTGTTCCAAATGTTCGGGGACGTGTGTTAAGTGAAGCTTCTGAAGATGCACAAGTC
GAGAAAGGCTTGTATGTATGTGGGTGGTTGAAGAGAGGACCAACTGGGATAATTGCTACA
AATCTTTACTGTGCTGAAGAAACTGTCGCTAGCATATCAGAAGATGTTGAGAGAGGAGTG
GTAACATCAAGATCTGGCTTATCTAAGCCCGGAAGGGAGGGCCTCCTCCAATTGCTAGAT
AGCAGGAATGTCAAAATTGTTCCATTTGGTGGCTGGGAAAAGATAGACAGTGAAGAGAAA
AGAAGAGGTAGTCTGAAAAACAAACCCAGGGAAAAGCTTACCTCTTGGCAGGATTTATTA
GAAGTTGCCACCAAGTGA