Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047041
CDS Infomation

pacid=37435865 polypeptide=PGSC0003DMP400031824 locus=PGSC0003DMG400018267 ID=PGSC0003DMT400047041.v4.03 annot-version=v4.03
Sequence

ATGAACCAACAAAGATTGGTGGAGAGCCTCCAACAATTCCGCCACATTTTGAAAACATGC
ATAGCCCAGAGAGACCTCTTAACTGGCAAATCTCTGCATACCCTTTACATCAAATCACTC
ATTCCACCGTCTACTTACTTCTCCAACCATTTCATCCTTCTCTACTCCAAGTGTGGCCTT
CTTACCACTGCTCGCAGGGCTTTTGAAGCTACCCCTGAACCCAATGTCTTCTCCTTCAAT
GCTATCCTTAATGCCTATGCTAAAGAAGCTCAGCCCCACCTTGCCCACCAGCTGTTTGAT
AAAATTCCCCAACCGGATATTGTTTCTTACAACACCCTTATATCTGCTTATGCTGATCTT
GGTTACACCCAGCCTGCTCTTCGGCTCTTTCTTGATTTGAAGGACACGGGTCTTGCTATG
GATGGGTTTACTCTTTCAGCTGCTATCACGGCTGCGAATGACAATGTTGATTTCATTACC
CAGCTTCATTCATTGTCTATATCCGCTGGGCTTGACTCTTATACTTCTGTTAATAATACT
CTCATCACGTATTATAGCAAAAATGGGCATCTTGATTATGCGCGAGAGGTTTTTGCGTCA
ATGGGTGAGATAAAAGATGAAGTTTCTTGGAATTCGATGATTGTTGCTTATGGGCAGCAT
AGGGAAGGGATAAAGGCGTTGGCTTTGTATAAAGAAATGGAACTTAGGGACTTATATTTA
GACATGTTTACTTTGGCAAGTGTATTGACAGCACTTACGTCCATGGAAGACTTGCGTGGT
GGGCTTCAATTTCATGCTCGGTTAATTAGAATGGGTTTTCACGAAAATCCACATGTTGGA
AGTGGGCTGATTGATTTATACTCAAAATGTAGTGGTGGTATATCAGAGTGCAAAAAAGTG
TTTCAGGAAATTCCTTATCCTGACTTGGTCCTTTGGAACACTATGATTTCTGGATATTCA
CAGTCTGACTTGTGTGAAGAAGCTGTTGCTTGTTTTAGACAGATGCAGCTTGCTGGCCAT
CAACCTGATGATTGCAGCTTTGTTTGTGTGATTAGTGCATCTTCTAACTTGTCATCGCCA
TCGCAAGGGAAACAAATTCACTCTTTGGCAATCAAATCTAGCATTTCATCCAATCGTATA
TCAGTGAACAATGCTCTCATTGCAATGTATTCTAAATGTGGAAGTCTACAAGATGCAAGA
TTACTTTTTGATAGAATGCCTGAGCATAATGCTGTCACTTTAAATTCCATGATAGCAGGC
TATGCTCAGCATGGGCATGGAGCAGAGTCGCTGTTACTTTTTGCATGGATGCTTGAAAGA
AATATTACACCTACAAACATAACATTCATCTCTGTCCTATCGTCATGTGCACACACTGGA
AAAGTCGAGGAAGGGAAGAAATATTTTGGTTTAATGACTGATAAATTTGGGATAAAACCA
GAGGCTGAGCACTATTTATGCATGATTGACCTTTTGGGTCGAGCAGGAAAGCTCGAGGAA
GCAGAGACACTAATCGAAACAATGCCATATAATCCTGGTACAATTGGATGGGGCTCATTA
CTTAGAGCATGTCGAACACATGGTAATATAGAGCTAGCAACAAAGGCAGCTAGCCACTGT
GTTCAGCTGGATCCATCAAATGCGGCACCGTATGTCATGCTTGTGCACATGAATGCTTGT
CTTGGCAGATGGGAAGAGGTAGCATCGATTAGAAAAGAAATGCGAGACAAGGGAGTGAGA
AAGCAAGTGGGTTGTAGTTGGATTGAGGTGGCCAAGAGGGTTCACGTCTTTGTGGCAGAA
GATAGTTCTCATCCGATGATAAAGTTGGTGTATAAATTCTGGGAAGAGATGTCAAAGAAG
ATGAAGCAAGAAGGGTATTCTCCCGATTTGAAGTGGGCTATGATGAGAGATGATGGAACA
AGGCAGGAGGAGAAAGAGAGAAGCTTATGGCATCACAGCGAAAAGCTGGCAGTTGCTTTC
GGGCTTTTATCGACCAAAGATGGTGAACCTATTCTTATCATAAAGAATTTGAGAATATGT
GGCGACTGTCATAATGCAATTAAGATTCTATCTGGTATGACAGGAAGAGAGATTACAGTA
AGGGATTGTCACAGGTTTCATTGCTTCAAGGCTGGGGCATGTTCTTGTGGGGATTACTGG
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400031824
PEP Infomation

pacid=37435865 transcript=PGSC0003DMT400047041 locus=PGSC0003DMG400018267 ID=PGSC0003DMT400047041.v4.03 annot-version=v4.03
Sequence

MNQQRLVESLQQFRHILKTCIAQRDLLTGKSLHTLYIKSLIPPSTYFSNHFILLYSKCGL
LTTARRAFEATPEPNVFSFNAILNAYAKEAQPHLAHQLFDKIPQPDIVSYNTLISAYADL
GYTQPALRLFLDLKDTGLAMDGFTLSAAITAANDNVDFITQLHSLSISAGLDSYTSVNNT
LITYYSKNGHLDYAREVFASMGEIKDEVSWNSMIVAYGQHREGIKALALYKEMELRDLYL
DMFTLASVLTALTSMEDLRGGLQFHARLIRMGFHENPHVGSGLIDLYSKCSGGISECKKV
FQEIPYPDLVLWNTMISGYSQSDLCEEAVACFRQMQLAGHQPDDCSFVCVISASSNLSSP
SQGKQIHSLAIKSSISSNRISVNNALIAMYSKCGSLQDARLLFDRMPEHNAVTLNSMIAG
YAQHGHGAESLLLFAWMLERNITPTNITFISVLSSCAHTGKVEEGKKYFGLMTDKFGIKP
EAEHYLCMIDLLGRAGKLEEAETLIETMPYNPGTIGWGSLLRACRTHGNIELATKAASHC
VQLDPSNAAPYVMLVHMNACLGRWEEVASIRKEMRDKGVRKQVGCSWIEVAKRVHVFVAE
DSSHPMIKLVYKFWEEMSKKMKQEGYSPDLKWAMMRDDGTRQEEKERSLWHHSEKLAVAF
GLLSTKDGEPILIIKNLRICGDCHNAIKILSGMTGREITVRDCHRFHCFKAGACSCGDYW
*

Transcript Sequence

Transcript ID

PGSC0003DMT400047041
Transcript Infomation

pacid=37435865 locus=PGSC0003DMG400018267 ID=PGSC0003DMT400047041.v4.03 annot-version=v4.03
Sequence

ATGAACCAACAAAGATTGGTGGAGAGCCTCCAACAATTCCGCCACATTTTGAAAACATGC
ATAGCCCAGAGAGACCTCTTAACTGGCAAATCTCTGCATACCCTTTACATCAAATCACTC
ATTCCACCGTCTACTTACTTCTCCAACCATTTCATCCTTCTCTACTCCAAGTGTGGCCTT
CTTACCACTGCTCGCAGGGCTTTTGAAGCTACCCCTGAACCCAATGTCTTCTCCTTCAAT
GCTATCCTTAATGCCTATGCTAAAGAAGCTCAGCCCCACCTTGCCCACCAGCTGTTTGAT
AAAATTCCCCAACCGGATATTGTTTCTTACAACACCCTTATATCTGCTTATGCTGATCTT
GGTTACACCCAGCCTGCTCTTCGGCTCTTTCTTGATTTGAAGGACACGGGTCTTGCTATG
GATGGGTTTACTCTTTCAGCTGCTATCACGGCTGCGAATGACAATGTTGATTTCATTACC
CAGCTTCATTCATTGTCTATATCCGCTGGGCTTGACTCTTATACTTCTGTTAATAATACT
CTCATCACGTATTATAGCAAAAATGGGCATCTTGATTATGCGCGAGAGGTTTTTGCGTCA
ATGGGTGAGATAAAAGATGAAGTTTCTTGGAATTCGATGATTGTTGCTTATGGGCAGCAT
AGGGAAGGGATAAAGGCGTTGGCTTTGTATAAAGAAATGGAACTTAGGGACTTATATTTA
GACATGTTTACTTTGGCAAGTGTATTGACAGCACTTACGTCCATGGAAGACTTGCGTGGT
GGGCTTCAATTTCATGCTCGGTTAATTAGAATGGGTTTTCACGAAAATCCACATGTTGGA
AGTGGGCTGATTGATTTATACTCAAAATGTAGTGGTGGTATATCAGAGTGCAAAAAAGTG
TTTCAGGAAATTCCTTATCCTGACTTGGTCCTTTGGAACACTATGATTTCTGGATATTCA
CAGTCTGACTTGTGTGAAGAAGCTGTTGCTTGTTTTAGACAGATGCAGCTTGCTGGCCAT
CAACCTGATGATTGCAGCTTTGTTTGTGTGATTAGTGCATCTTCTAACTTGTCATCGCCA
TCGCAAGGGAAACAAATTCACTCTTTGGCAATCAAATCTAGCATTTCATCCAATCGTATA
TCAGTGAACAATGCTCTCATTGCAATGTATTCTAAATGTGGAAGTCTACAAGATGCAAGA
TTACTTTTTGATAGAATGCCTGAGCATAATGCTGTCACTTTAAATTCCATGATAGCAGGC
TATGCTCAGCATGGGCATGGAGCAGAGTCGCTGTTACTTTTTGCATGGATGCTTGAAAGA
AATATTACACCTACAAACATAACATTCATCTCTGTCCTATCGTCATGTGCACACACTGGA
AAAGTCGAGGAAGGGAAGAAATATTTTGGTTTAATGACTGATAAATTTGGGATAAAACCA
GAGGCTGAGCACTATTTATGCATGATTGACCTTTTGGGTCGAGCAGGAAAGCTCGAGGAA
GCAGAGACACTAATCGAAACAATGCCATATAATCCTGGTACAATTGGATGGGGCTCATTA
CTTAGAGCATGTCGAACACATGGTAATATAGAGCTAGCAACAAAGGCAGCTAGCCACTGT
GTTCAGCTGGATCCATCAAATGCGGCACCGTATGTCATGCTTGTGCACATGAATGCTTGT
CTTGGCAGATGGGAAGAGGTAGCATCGATTAGAAAAGAAATGCGAGACAAGGGAGTGAGA
AAGCAAGTGGGTTGTAGTTGGATTGAGGTGGCCAAGAGGGTTCACGTCTTTGTGGCAGAA
GATAGTTCTCATCCGATGATAAAGTTGGTGTATAAATTCTGGGAAGAGATGTCAAAGAAG
ATGAAGCAAGAAGGGTATTCTCCCGATTTGAAGTGGGCTATGATGAGAGATGATGGAACA
AGGCAGGAGGAGAAAGAGAGAAGCTTATGGCATCACAGCGAAAAGCTGGCAGTTGCTTTC
GGGCTTTTATCGACCAAAGATGGTGAACCTATTCTTATCATAAAGAATTTGAGAATATGT
GGCGACTGTCATAATGCAATTAAGATTCTATCTGGTATGACAGGAAGAGAGATTACAGTA
AGGGATTGTCACAGGTTTCATTGCTTCAAGGCTGGGGCATGTTCTTGTGGGGATTACTGG
TGA