Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047012
CDS Infomation

pacid=37436067 polypeptide=PGSC0003DMP400031813 locus=PGSC0003DMG400018260 ID=PGSC0003DMT400047012.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGAGAGACGCATGGTAACAGTGGGAGGGAAAGGCTCATCACTGTCATCTTCC
TCTGTATTTGATATTGCCAGTGGACTCAGTCGTCTGAGCATAGACTCTTCAGCACTCTCC
AAAGTATCGTCTTCCTCTAATTCTAAAACCAGCAAGACTAATGCGCCTACGGTGTCTGCA
TCATTTTCAATTCTCAGTAATTTAACACCCGATGAGGCTAGAGCTTCTCTCGTGGTCCTC
CTAAACAAGCTTTTGCTTTCTTCTTCCACTTCTGCAGCTGTTAATCAGCTCTCTGATATC
ATCCTTAAGGATGTGTCGTCGTCCTCTAATTTACAAATTTCATTTGATAACACTATTGAT
GGCGTTTCTCCAGGTGATTTTTCTGTGGCAGCAATAGCTGGAATCTCCGCTATCTTGGAT
CATCAAAGTTCAGCTTTGTCTGTTATTACTGATGCTATTGCTGCCTTGTCCTGCGAGGCC
TTGGGGGCTGACATTTCAGCTTTCAATTTGAATGATTCCGGTGATGGTTCATCTGCCAAG
GACGTTGTTTCTGTGGCTTCTGACTTGAAGATCTTGCTTAACGGTTCTAAATTTGTTAAC
CGTGAGGGTGATGAACCTGCAGTTTCTGGTGTTCCCGTGGTGCACGGCAAGTTTAGGGAG
ATTTCCCGGCTTCTGCACTCCAGCACCCGTGTCCAATTGAACTCTGCAATTGTATCCAAT
TCTGGATCTTCTGGTACAGCCAGCTCCATGTGCACCACGTTGTTTTCTTTGGCTGTGGCC
CTCAAGGATTTGGGTAACATCAGTTATAACCGAGCAAAGCACATTGTCGATTCTCGCATT
GCTGGAGATGATGAATTTCCTGCAATGCTGATAAAAGAATGTCCTCGCCCTGATCAGCTA
AAAGCTCTTTTCGCATCTTTGGTGTCAGCTCACTCGGATGAGGAATATGTTAAGTTCTCA
CATGATGTCAGCTCTTTACTGGTGATGGTAGAACAAATAATTTCTTGGGAAGCCCTGGCT
GCTTTCCTTTCCTTGGAAGGAAGGGACTTCATTACTTCAGGTGATACGAGTGTAGGCGAG
GACAGTGCAAAGACAGCAGGTAAAAAAGGAGCAAAGAAGAAGAAGATTCTGGGTAAAGGT
ACCACCGCTCTGGTGCAGTTTTTGAAGGATAGGCTGCTGAGCATGCCAATTCAGACTGAA
GTGTCCCAGACTGTCATGGTTTTGGAGAATTTGGTTCGCAATTTCTTGTCACTACTGGAC
CCAAAAGACTTGGGATTTGACACTTTACTGAAAAAGGTGAAAGATATCGTGGAAAGCAAT
GAAAGTCGCCGGTTGCCTAAACTGCCAAAGGGAACACGTGATTTTGCAAAGGAACAGATG
GCTATAAGAGAGAGAGCTTTCTCAATTATCACTGAAGTTTTTAAAAGGCACGGTGCTGCT
GCTTTGGACACTCCTGCTTTTGAAATGCGAGAGACTCTGATGGGCAAATATGGAGAAGAC
TCAAAATTGATATATGACCTTGCGGATCAGGGAGGAGAACTTTGTTCTCTTCGTTATGAC
CTGACAGTCCCGTTTGCTAGATACGTAGCAATGAATGGTCTGACATCCTTCAAGCGTTAT
CAGATAGCTAAGGTGTACAGAAGAGATAATCCATCTAAGGGTAGATATCGTGAATTTTAC
CAGTGTGATTTTGATATAGCTGGTCAGTTTGAGAAGATGATGCCTGATTTTGAGGTCATT
AAGATTTTGACCGAGTTGTTAGATGAGCTTGATATTGGAGAGTATGAGGTAAAGCTTAAT
CACAGGAAGCTGCTTGATGGTATGTTGGCTATATGCGGGGTGCCACAAGAGAAGTTCAGA
ACCATTTGTTCAAGCATTGACAAGCTAGATAAACAATCCTTTGAGCAGATAAAAAAAGAA
ATGGTGGATGAGAAAGGCTTAAGTAATGAGATATCAGACAGAATTGGTACATTTGTCAAA
TGGAGGGGACCTCCTGTGGAATTATTATCTAAGCTCAAGCAGGAATGCAGTTTTTTGGAG
AACAATGAATCTTCACTTGCTTTGGATGAATTAGAGATTATGTTTAAAGCTCTGGAGAAG
TCCAAGTGTATTGACAGAGTGGTTTTTGACTTGAGCCTTGCAAGAGGGCTTGATTACTAC
ACAGGAGTCATATTTGAAGCTGTTTTCAAAGGAGCTGCTCAGGTTGGTTCGATTGCTGCT
GGTGGACGTTATGACAATCTGATAGGGATGTTTGGCACACGGCAGGTTCCTTCTGTTGGG
ATCAGTCTGGGAATAGAGAGAGTATTTGCAATCATGGAACAGCTTCAGAAAGACAAAAAT
CAGGAAATCCGAGCCACTGAAACTCAAGTTCTCGTTAGCATTCTTGGTGATGACAGTGCT
TTAGCTGCTGAACTGGTTGGTGAATTGTGGCATGCTAAAGTGAAAGCAGAATTTATGATC
CATAAAAAAGTGATGAAGCACATTGATCGGGCCAGAGATTCAAGGATCCCTTGGATGGTA
CTTGTTGGTGAACGCGAACTTAGTGAAGGAGTTGTAAAATTGAAGGATGTTGTTGCAGCT
ATTGACTATGAGGTCCCCAGAGGTAAGCTTGTGGACGATCTATGCAAACGATTAGGCATG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400031813
PEP Infomation

pacid=37436067 transcript=PGSC0003DMT400047012 locus=PGSC0003DMG400018260 ID=PGSC0003DMT400047012.v4.03 annot-version=v4.03
Sequence

MAEERRMVTVGGKGSSLSSSSVFDIASGLSRLSIDSSALSKVSSSSNSKTSKTNAPTVSA
SFSILSNLTPDEARASLVVLLNKLLLSSSTSAAVNQLSDIILKDVSSSSNLQISFDNTID
GVSPGDFSVAAIAGISAILDHQSSALSVITDAIAALSCEALGADISAFNLNDSGDGSSAK
DVVSVASDLKILLNGSKFVNREGDEPAVSGVPVVHGKFREISRLLHSSTRVQLNSAIVSN
SGSSGTASSMCTTLFSLAVALKDLGNISYNRAKHIVDSRIAGDDEFPAMLIKECPRPDQL
KALFASLVSAHSDEEYVKFSHDVSSLLVMVEQIISWEALAAFLSLEGRDFITSGDTSVGE
DSAKTAGKKGAKKKKILGKGTTALVQFLKDRLLSMPIQTEVSQTVMVLENLVRNFLSLLD
PKDLGFDTLLKKVKDIVESNESRRLPKLPKGTRDFAKEQMAIRERAFSIITEVFKRHGAA
ALDTPAFEMRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRY
QIAKVYRRDNPSKGRYREFYQCDFDIAGQFEKMMPDFEVIKILTELLDELDIGEYEVKLN
HRKLLDGMLAICGVPQEKFRTICSSIDKLDKQSFEQIKKEMVDEKGLSNEISDRIGTFVK
WRGPPVELLSKLKQECSFLENNESSLALDELEIMFKALEKSKCIDRVVFDLSLARGLDYY
TGVIFEAVFKGAAQVGSIAAGGRYDNLIGMFGTRQVPSVGISLGIERVFAIMEQLQKDKN
QEIRATETQVLVSILGDDSALAAELVGELWHAKVKAEFMIHKKVMKHIDRARDSRIPWMV
LVGERELSEGVVKLKDVVAAIDYEVPRGKLVDDLCKRLGM*

Transcript Sequence

Transcript ID

PGSC0003DMT400047012
Transcript Infomation

pacid=37436067 locus=PGSC0003DMG400018260 ID=PGSC0003DMT400047012.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGAGAGACGCATGGTAACAGTGGGAGGGAAAGGCTCATCACTGTCATCTTCC
TCTGTATTTGATATTGCCAGTGGACTCAGTCGTCTGAGCATAGACTCTTCAGCACTCTCC
AAAGTATCGTCTTCCTCTAATTCTAAAACCAGCAAGACTAATGCGCCTACGGTGTCTGCA
TCATTTTCAATTCTCAGTAATTTAACACCCGATGAGGCTAGAGCTTCTCTCGTGGTCCTC
CTAAACAAGCTTTTGCTTTCTTCTTCCACTTCTGCAGCTGTTAATCAGCTCTCTGATATC
ATCCTTAAGGATGTGTCGTCGTCCTCTAATTTACAAATTTCATTTGATAACACTATTGAT
GGCGTTTCTCCAGGTGATTTTTCTGTGGCAGCAATAGCTGGAATCTCCGCTATCTTGGAT
CATCAAAGTTCAGCTTTGTCTGTTATTACTGATGCTATTGCTGCCTTGTCCTGCGAGGCC
TTGGGGGCTGACATTTCAGCTTTCAATTTGAATGATTCCGGTGATGGTTCATCTGCCAAG
GACGTTGTTTCTGTGGCTTCTGACTTGAAGATCTTGCTTAACGGTTCTAAATTTGTTAAC
CGTGAGGGTGATGAACCTGCAGTTTCTGGTGTTCCCGTGGTGCACGGCAAGTTTAGGGAG
ATTTCCCGGCTTCTGCACTCCAGCACCCGTGTCCAATTGAACTCTGCAATTGTATCCAAT
TCTGGATCTTCTGGTACAGCCAGCTCCATGTGCACCACGTTGTTTTCTTTGGCTGTGGCC
CTCAAGGATTTGGGTAACATCAGTTATAACCGAGCAAAGCACATTGTCGATTCTCGCATT
GCTGGAGATGATGAATTTCCTGCAATGCTGATAAAAGAATGTCCTCGCCCTGATCAGCTA
AAAGCTCTTTTCGCATCTTTGGTGTCAGCTCACTCGGATGAGGAATATGTTAAGTTCTCA
CATGATGTCAGCTCTTTACTGGTGATGGTAGAACAAATAATTTCTTGGGAAGCCCTGGCT
GCTTTCCTTTCCTTGGAAGGAAGGGACTTCATTACTTCAGGTGATACGAGTGTAGGCGAG
GACAGTGCAAAGACAGCAGGTAAAAAAGGAGCAAAGAAGAAGAAGATTCTGGGTAAAGGT
ACCACCGCTCTGGTGCAGTTTTTGAAGGATAGGCTGCTGAGCATGCCAATTCAGACTGAA
GTGTCCCAGACTGTCATGGTTTTGGAGAATTTGGTTCGCAATTTCTTGTCACTACTGGAC
CCAAAAGACTTGGGATTTGACACTTTACTGAAAAAGGTGAAAGATATCGTGGAAAGCAAT
GAAAGTCGCCGGTTGCCTAAACTGCCAAAGGGAACACGTGATTTTGCAAAGGAACAGATG
GCTATAAGAGAGAGAGCTTTCTCAATTATCACTGAAGTTTTTAAAAGGCACGGTGCTGCT
GCTTTGGACACTCCTGCTTTTGAAATGCGAGAGACTCTGATGGGCAAATATGGAGAAGAC
TCAAAATTGATATATGACCTTGCGGATCAGGGAGGAGAACTTTGTTCTCTTCGTTATGAC
CTGACAGTCCCGTTTGCTAGATACGTAGCAATGAATGGTCTGACATCCTTCAAGCGTTAT
CAGATAGCTAAGGTGTACAGAAGAGATAATCCATCTAAGGGTAGATATCGTGAATTTTAC
CAGTGTGATTTTGATATAGCTGGTCAGTTTGAGAAGATGATGCCTGATTTTGAGGTCATT
AAGATTTTGACCGAGTTGTTAGATGAGCTTGATATTGGAGAGTATGAGGTAAAGCTTAAT
CACAGGAAGCTGCTTGATGGTATGTTGGCTATATGCGGGGTGCCACAAGAGAAGTTCAGA
ACCATTTGTTCAAGCATTGACAAGCTAGATAAACAATCCTTTGAGCAGATAAAAAAAGAA
ATGGTGGATGAGAAAGGCTTAAGTAATGAGATATCAGACAGAATTGGTACATTTGTCAAA
TGGAGGGGACCTCCTGTGGAATTATTATCTAAGCTCAAGCAGGAATGCAGTTTTTTGGAG
AACAATGAATCTTCACTTGCTTTGGATGAATTAGAGATTATGTTTAAAGCTCTGGAGAAG
TCCAAGTGTATTGACAGAGTGGTTTTTGACTTGAGCCTTGCAAGAGGGCTTGATTACTAC
ACAGGAGTCATATTTGAAGCTGTTTTCAAAGGAGCTGCTCAGGTTGGTTCGATTGCTGCT
GGTGGACGTTATGACAATCTGATAGGGATGTTTGGCACACGGCAGGTTCCTTCTGTTGGG
ATCAGTCTGGGAATAGAGAGAGTATTTGCAATCATGGAACAGCTTCAGAAAGACAAAAAT
CAGGAAATCCGAGCCACTGAAACTCAAGTTCTCGTTAGCATTCTTGGTGATGACAGTGCT
TTAGCTGCTGAACTGGTTGGTGAATTGTGGCATGCTAAAGTGAAAGCAGAATTTATGATC
CATAAAAAAGTGATGAAGCACATTGATCGGGCCAGAGATTCAAGGATCCCTTGGATGGTA
CTTGTTGGTGAACGCGAACTTAGTGAAGGAGTTGTAAAATTGAAGGATGTTGTTGCAGCT
ATTGACTATGAGGTCCCCAGAGGTAAGCTTGTGGACGATCTATGCAAACGATTAGGCATG
TAA