Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047011
CDS Infomation

pacid=37441705 polypeptide=PGSC0003DMP400031812 locus=PGSC0003DMG400018259 ID=PGSC0003DMT400047011.v4.03 annot-version=v4.03
Sequence

ATGTCATCGGAAAAGTTCAGCCGTGGTGGCAATAGTGGGGTTATTGGGAATGGCTTTGAT
CCAAGTAATCTTCATTTGAAAAAAGAATTAACCCAAATCAAGAAAGCTGCTAAAGTGTTG
AGAGATCCAGGGACCAGTTCCTCTTGGCGTTCACCACTTAACTCTGCTAGATCTGTAGCT
GCAGCAGAAGCACGCAAGCATCATTATTTTCATCATCATAAGGGTAGTAATCCTACTAAG
CATCAAGTTAGTGGCTCTCTTGATGCTAAAGGAACTATCTTTGAGCAAGTTGATAGAAAT
GGTGTCACTGGAAATAATGGGAAAGAGAAAAAAGTGTTTCTTTATAATTGGAGGTCACAA
AAGTCTGAGAGTGAAAGGAGTAGAAAACTAGGTGATGAGGAAGATATTGGAAATGGCAAT
GATGATGGGTCTTCTTCAACTCCAGAGGAGAGTGTGGAGGATAGTTTGAGCGATGCGCGG
CATGGTGGCAATGATTCCAAGAGTGATACTTATGTAAGTGATAGGTATGCTTCAACGATT
TTAAAGTGTAAAGATACAAACTTTATGCCATCTATTAGACGTAACATGAAGAAAAAATCA
AGTAGAAGTAATTATTCTAGTGCTGTTTTAAAACATCATAGTGAAAAGTTGCAGTTGCAG
CAACAAATTGTTCCTAGTAGGATTTCTAGAAGAGCGTCGGAGGGTTTAGGTACAGGGAGG
GATGATTCCACGAGTTTGGTTGATCAATCTGATGATACAGAGGATTATTGTAATTCTGAG
GATATAAGGAGGATCTCTGCAGCTTCACCATTGCTTGCGAAGCTTAGGAATAGGAATCGG
GCTTATTGGTCATCTAAGTTGAGAAATAGTGGGAGGGAGGATTCGTCTTATACGTATAGC
ACCCCTGCATTGTCTACAAGTTCTTTCAACAGATATGCTATTCGAAATCCAAGTACTGTT
GGGTCATGGGATGCCACAACGGCTTCTCTCAATGATGGGGATGATGAGGTGGATGATCAG
CTTGATTTGCCTGGTCGACAGGGATGTGGGATTCCTTGTTGGTCCAGGAGGTCAACACCA
AAATATAGGGGTGGGGGTGGGAGTTGTTATTCACCATCCTTTTCTGATACTTTGAGGAGG
AAAGGAAGTAGCATTTTGTGTGGAAGTCAAACTATGTATCAAAGAAGAAGCCGCGGATCA
TCTTTAGGTTGCACCAAGAGGAGACACAGTTCGAGGAATGGTGCTCAAGGCCTCATTCCA
TTGCTAACTAATGGTGATGGACAAGGACTATCCTCAATGGGAACTGGACACAGTGATGAT
GAGCTCTCCACAAACTTTGGGGAACTTGATCTCGAGGCATTGAGTAGGTTGGATGGGAAG
AGGTGGTCTACTAGCTGCAGAAGTCAAGATGGGCTAGAGCTGGTGGCACTGAAGGGAGAA
GATGGAGAGGAAGGCTCCCCGGATAATATCAGAAGCCTGAGCCAGAAGTACAGGCCAATG
TTTTTCGAGGAATTAATTGGGCAGAACATTGTTGTTCAGTCCTTAGTGAATGCAATCTCC
AGGGGACGAATTGCCCCTGTTTATCTTTTCCAGGGCCCACGAGGGACTGGAAAGACATCA
ACAGCAAGGATTTTCACTGCTGCTTTAAATTGCCTTGCCACAGAAGAAACTAAACCCTGT
GGTGTCTGCAGAGAATGTGCAGATTTCATGTCGGGGAAATGTAAGAATCTTAGAGAAGTT
GATGGGACGAACAAAAAAGGAATTGATAAAGTTAAATATCTTCTGAAGAATCTGGCAGCG
AGTCAGCAATCATCTTCAGGATTCAAGGTTTTTGTTGTTGATGAATGTCACTTGCTGCCT
TCAAAGACATGGCTAGCATTCCTGAAGTTCCTTGAAGAACCACCACCAAGAGTTGTTTTC
ATATTTATAACTACTGATCTTGACAATGTGCCGCGTGCTGTATTGTCTCGGTGTCAGAAG
TACCTCTTCAATAAAATTAGGGATGGTGATATTGTGCTCAGATTAAAGAAGATTTCTTCT
GACGAGGATTTGGATGTGGAGCCAGAAGCATTAGATTTGATTGCTTTAAATGCAGATGGA
TCACTTCGAGATGCAGAAACTATGTTAGACCAGCTCAGTTTGTTGGGGAAACGAATCACT
ACTTCTTTGGTAAATGATCTGATTGGTGTGGTTTCAGATGAGAAGCTACTGGAACTTTTG
GAGCTAGCCATGTCATCAGACACTGCAGAAACAGTGAAAAGAGCCCGGGAATTGTTGGAT
TCAGGTGTTGATCCAATAGTTTTGATGTCTCAATTGGCTACTCTCATCATGGATATAATT
GCTGGAACTCATCCAATAGTTGATGCAAAGCAAACTGATATCTCTGGCGGTAAAAGTTTG
AACGAGACAGAACTGGATAGATTGAAGCATGCACTAAAGCTTCTTTCTGAGGCAGAGAAA
CAACTAAGGGTTTCAAGTGAACGTTCGACTTGGTTTACAGCAACCCTGCTGCAGTTGGGT
TCTGCGACTTCACTAGATCGAACTCATTCAGGAAGCAGTCACAGGCTGAGTTCTAAGACA
ACAGAGGAAGACCCTTCTAGTACATCTAGAGAAGCTATATCCCTGAGGCAGAGAACTGAT
ATTCACCATGCACCATGTAAGTCAGGTTCTCCCTCATCTTTTGCCAAAGCCAACCGTCGA
AACTCAGCAAGTAGAGAATTGACAATTTCATCAATGAATGAGGAGGCATTGGGTGGTCCA
CATAATGACACTAAGGACAACAAGACAGCATCTAGGTGCCCCAACACAAACGTGTTGGAT
GATATCTGGATCAGATGCATTGATAAATGCCACTCCAACACTTTGAAGCAATTGCTTCAT
ACTTGTGGAACACTTCTGTCGATCTCTGAAGTTGAAGGTGGTTTTGTTGCTCATATTGCC
TTTCGTGATAGCAAGGTTAAATTGAGAGCAGAGAGGTTTCTTAGCAGTATCACGAATTCA
TTTGAAACTATTTTACGGAGCAATGTAGAGGTTAGACTTGTTCTCCTACCGGATGGGGAG
ACATCTGATGACAGTGGAAAGCCAATTACATTGATCAATTCTGGAGGTTTGAAACAGATG
GGTTCGCAAAATAATATGGTGAAGAGGGAAACAGCAGTTTGCTCAAATCAGGATCTGCTG
CAGGTATCAAGAGGAAGCTTTAATGATTCTGAAAGCAAGATGGTTGAAACTTTTGAGTCA
GCAAGTGGAAATGCTGGAACGAGTAGTTCTAAAGAGAGAATCTCAGAAATTCCAGTGCAG
AGAATAGAATCCATCATACGTGAGCAGAGGTTAGAAACAGCATGGTTACAAGCAATGGAG
AAAGGCACTCCTGGATCAATGAGTCGCCTGAAACCTGAGAGGAACCAAGTCCTTCCACAA
GATGGTCTTTATCATAACAACCAACTAGAACCAATTAATTCGAGGGAACTGTCCTCCCAG
CATTGGCATGATGATCTAAATGAGGAAATTAGAAGTCTTAAGATGATTGACGGAAAGGCT
GTTCAGAAGGATCAGACCAGTAAAAAGGGTGACAGTTATCCCATTTCACCAAGTTTGTTG
CATAATGGCATATATGCCAGTAATTTCAGCAAAGAGAGCATGGGTTATGAATCAGGATCA
GGAGCTGGGGGTTGTTTCTGTTGGAACAACACCAGACCCCAAAGAAGGGGAAAGGTTAAA
CAAGGGACCCCTGTGAGACCACCTAAAGGCGGGCGGTTCTTATGGTTTGGGGAGTGTGCA
AAACCAAGGAGAACAGAGAGTAGATTGAGAAGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400031812
PEP Infomation

pacid=37441705 transcript=PGSC0003DMT400047011 locus=PGSC0003DMG400018259 ID=PGSC0003DMT400047011.v4.03 annot-version=v4.03
Sequence

MSSEKFSRGGNSGVIGNGFDPSNLHLKKELTQIKKAAKVLRDPGTSSSWRSPLNSARSVA
AAEARKHHYFHHHKGSNPTKHQVSGSLDAKGTIFEQVDRNGVTGNNGKEKKVFLYNWRSQ
KSESERSRKLGDEEDIGNGNDDGSSSTPEESVEDSLSDARHGGNDSKSDTYVSDRYASTI
LKCKDTNFMPSIRRNMKKKSSRSNYSSAVLKHHSEKLQLQQQIVPSRISRRASEGLGTGR
DDSTSLVDQSDDTEDYCNSEDIRRISAASPLLAKLRNRNRAYWSSKLRNSGREDSSYTYS
TPALSTSSFNRYAIRNPSTVGSWDATTASLNDGDDEVDDQLDLPGRQGCGIPCWSRRSTP
KYRGGGGSCYSPSFSDTLRRKGSSILCGSQTMYQRRSRGSSLGCTKRRHSSRNGAQGLIP
LLTNGDGQGLSSMGTGHSDDELSTNFGELDLEALSRLDGKRWSTSCRSQDGLELVALKGE
DGEEGSPDNIRSLSQKYRPMFFEELIGQNIVVQSLVNAISRGRIAPVYLFQGPRGTGKTS
TARIFTAALNCLATEETKPCGVCRECADFMSGKCKNLREVDGTNKKGIDKVKYLLKNLAA
SQQSSSGFKVFVVDECHLLPSKTWLAFLKFLEEPPPRVVFIFITTDLDNVPRAVLSRCQK
YLFNKIRDGDIVLRLKKISSDEDLDVEPEALDLIALNADGSLRDAETMLDQLSLLGKRIT
TSLVNDLIGVVSDEKLLELLELAMSSDTAETVKRARELLDSGVDPIVLMSQLATLIMDII
AGTHPIVDAKQTDISGGKSLNETELDRLKHALKLLSEAEKQLRVSSERSTWFTATLLQLG
SATSLDRTHSGSSHRLSSKTTEEDPSSTSREAISLRQRTDIHHAPCKSGSPSSFAKANRR
NSASRELTISSMNEEALGGPHNDTKDNKTASRCPNTNVLDDIWIRCIDKCHSNTLKQLLH
TCGTLLSISEVEGGFVAHIAFRDSKVKLRAERFLSSITNSFETILRSNVEVRLVLLPDGE
TSDDSGKPITLINSGGLKQMGSQNNMVKRETAVCSNQDLLQVSRGSFNDSESKMVETFES
ASGNAGTSSSKERISEIPVQRIESIIREQRLETAWLQAMEKGTPGSMSRLKPERNQVLPQ
DGLYHNNQLEPINSRELSSQHWHDDLNEEIRSLKMIDGKAVQKDQTSKKGDSYPISPSLL
HNGIYASNFSKESMGYESGSGAGGCFCWNNTRPQRRGKVKQGTPVRPPKGGRFLWFGECA
KPRRTESRLRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400047011
Transcript Infomation

pacid=37441705 locus=PGSC0003DMG400018259 ID=PGSC0003DMT400047011.v4.03 annot-version=v4.03
Sequence

ATGTCATCGGAAAAGTTCAGCCGTGGTGGCAATAGTGGGGTTATTGGGAATGGCTTTGAT
CCAAGTAATCTTCATTTGAAAAAAGAATTAACCCAAATCAAGAAAGCTGCTAAAGTGTTG
AGAGATCCAGGGACCAGTTCCTCTTGGCGTTCACCACTTAACTCTGCTAGATCTGTAGCT
GCAGCAGAAGCACGCAAGCATCATTATTTTCATCATCATAAGGGTAGTAATCCTACTAAG
CATCAAGTTAGTGGCTCTCTTGATGCTAAAGGAACTATCTTTGAGCAAGTTGATAGAAAT
GGTGTCACTGGAAATAATGGGAAAGAGAAAAAAGTGTTTCTTTATAATTGGAGGTCACAA
AAGTCTGAGAGTGAAAGGAGTAGAAAACTAGGTGATGAGGAAGATATTGGAAATGGCAAT
GATGATGGGTCTTCTTCAACTCCAGAGGAGAGTGTGGAGGATAGTTTGAGCGATGCGCGG
CATGGTGGCAATGATTCCAAGAGTGATACTTATGTAAGTGATAGGTATGCTTCAACGATT
TTAAAGTGTAAAGATACAAACTTTATGCCATCTATTAGACGTAACATGAAGAAAAAATCA
AGTAGAAGTAATTATTCTAGTGCTGTTTTAAAACATCATAGTGAAAAGTTGCAGTTGCAG
CAACAAATTGTTCCTAGTAGGATTTCTAGAAGAGCGTCGGAGGGTTTAGGTACAGGGAGG
GATGATTCCACGAGTTTGGTTGATCAATCTGATGATACAGAGGATTATTGTAATTCTGAG
GATATAAGGAGGATCTCTGCAGCTTCACCATTGCTTGCGAAGCTTAGGAATAGGAATCGG
GCTTATTGGTCATCTAAGTTGAGAAATAGTGGGAGGGAGGATTCGTCTTATACGTATAGC
ACCCCTGCATTGTCTACAAGTTCTTTCAACAGATATGCTATTCGAAATCCAAGTACTGTT
GGGTCATGGGATGCCACAACGGCTTCTCTCAATGATGGGGATGATGAGGTGGATGATCAG
CTTGATTTGCCTGGTCGACAGGGATGTGGGATTCCTTGTTGGTCCAGGAGGTCAACACCA
AAATATAGGGGTGGGGGTGGGAGTTGTTATTCACCATCCTTTTCTGATACTTTGAGGAGG
AAAGGAAGTAGCATTTTGTGTGGAAGTCAAACTATGTATCAAAGAAGAAGCCGCGGATCA
TCTTTAGGTTGCACCAAGAGGAGACACAGTTCGAGGAATGGTGCTCAAGGCCTCATTCCA
TTGCTAACTAATGGTGATGGACAAGGACTATCCTCAATGGGAACTGGACACAGTGATGAT
GAGCTCTCCACAAACTTTGGGGAACTTGATCTCGAGGCATTGAGTAGGTTGGATGGGAAG
AGGTGGTCTACTAGCTGCAGAAGTCAAGATGGGCTAGAGCTGGTGGCACTGAAGGGAGAA
GATGGAGAGGAAGGCTCCCCGGATAATATCAGAAGCCTGAGCCAGAAGTACAGGCCAATG
TTTTTCGAGGAATTAATTGGGCAGAACATTGTTGTTCAGTCCTTAGTGAATGCAATCTCC
AGGGGACGAATTGCCCCTGTTTATCTTTTCCAGGGCCCACGAGGGACTGGAAAGACATCA
ACAGCAAGGATTTTCACTGCTGCTTTAAATTGCCTTGCCACAGAAGAAACTAAACCCTGT
GGTGTCTGCAGAGAATGTGCAGATTTCATGTCGGGGAAATGTAAGAATCTTAGAGAAGTT
GATGGGACGAACAAAAAAGGAATTGATAAAGTTAAATATCTTCTGAAGAATCTGGCAGCG
AGTCAGCAATCATCTTCAGGATTCAAGGTTTTTGTTGTTGATGAATGTCACTTGCTGCCT
TCAAAGACATGGCTAGCATTCCTGAAGTTCCTTGAAGAACCACCACCAAGAGTTGTTTTC
ATATTTATAACTACTGATCTTGACAATGTGCCGCGTGCTGTATTGTCTCGGTGTCAGAAG
TACCTCTTCAATAAAATTAGGGATGGTGATATTGTGCTCAGATTAAAGAAGATTTCTTCT
GACGAGGATTTGGATGTGGAGCCAGAAGCATTAGATTTGATTGCTTTAAATGCAGATGGA
TCACTTCGAGATGCAGAAACTATGTTAGACCAGCTCAGTTTGTTGGGGAAACGAATCACT
ACTTCTTTGGTAAATGATCTGATTGGTGTGGTTTCAGATGAGAAGCTACTGGAACTTTTG
GAGCTAGCCATGTCATCAGACACTGCAGAAACAGTGAAAAGAGCCCGGGAATTGTTGGAT
TCAGGTGTTGATCCAATAGTTTTGATGTCTCAATTGGCTACTCTCATCATGGATATAATT
GCTGGAACTCATCCAATAGTTGATGCAAAGCAAACTGATATCTCTGGCGGTAAAAGTTTG
AACGAGACAGAACTGGATAGATTGAAGCATGCACTAAAGCTTCTTTCTGAGGCAGAGAAA
CAACTAAGGGTTTCAAGTGAACGTTCGACTTGGTTTACAGCAACCCTGCTGCAGTTGGGT
TCTGCGACTTCACTAGATCGAACTCATTCAGGAAGCAGTCACAGGCTGAGTTCTAAGACA
ACAGAGGAAGACCCTTCTAGTACATCTAGAGAAGCTATATCCCTGAGGCAGAGAACTGAT
ATTCACCATGCACCATGTAAGTCAGGTTCTCCCTCATCTTTTGCCAAAGCCAACCGTCGA
AACTCAGCAAGTAGAGAATTGACAATTTCATCAATGAATGAGGAGGCATTGGGTGGTCCA
CATAATGACACTAAGGACAACAAGACAGCATCTAGGTGCCCCAACACAAACGTGTTGGAT
GATATCTGGATCAGATGCATTGATAAATGCCACTCCAACACTTTGAAGCAATTGCTTCAT
ACTTGTGGAACACTTCTGTCGATCTCTGAAGTTGAAGGTGGTTTTGTTGCTCATATTGCC
TTTCGTGATAGCAAGGTTAAATTGAGAGCAGAGAGGTTTCTTAGCAGTATCACGAATTCA
TTTGAAACTATTTTACGGAGCAATGTAGAGGTTAGACTTGTTCTCCTACCGGATGGGGAG
ACATCTGATGACAGTGGAAAGCCAATTACATTGATCAATTCTGGAGGTTTGAAACAGATG
GGTTCGCAAAATAATATGGTGAAGAGGGAAACAGCAGTTTGCTCAAATCAGGATCTGCTG
CAGGTATCAAGAGGAAGCTTTAATGATTCTGAAAGCAAGATGGTTGAAACTTTTGAGTCA
GCAAGTGGAAATGCTGGAACGAGTAGTTCTAAAGAGAGAATCTCAGAAATTCCAGTGCAG
AGAATAGAATCCATCATACGTGAGCAGAGGTTAGAAACAGCATGGTTACAAGCAATGGAG
AAAGGCACTCCTGGATCAATGAGTCGCCTGAAACCTGAGAGGAACCAAGTCCTTCCACAA
GATGGTCTTTATCATAACAACCAACTAGAACCAATTAATTCGAGGGAACTGTCCTCCCAG
CATTGGCATGATGATCTAAATGAGGAAATTAGAAGTCTTAAGATGATTGACGGAAAGGCT
GTTCAGAAGGATCAGACCAGTAAAAAGGGTGACAGTTATCCCATTTCACCAAGTTTGTTG
CATAATGGCATATATGCCAGTAATTTCAGCAAAGAGAGCATGGGTTATGAATCAGGATCA
GGAGCTGGGGGTTGTTTCTGTTGGAACAACACCAGACCCCAAAGAAGGGGAAAGGTTAAA
CAAGGGACCCCTGTGAGACCACCTAAAGGCGGGCGGTTCTTATGGTTTGGGGAGTGTGCA
AAACCAAGGAGAACAGAGAGTAGATTGAGAAGATAG