Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400047001
CDS Infomation

pacid=37436107 polypeptide=PGSC0003DMP400031803 locus=PGSC0003DMG400018256 ID=PGSC0003DMT400047001.v4.03 annot-version=v4.03
Sequence

ATGTCTCAGTTTGCTTTTCATGCATTTCTGAGTTTGGCAACAAAAACAGGCAAGTCTTTT
GGAAATCATCTTCATTCAGCTTTATCAAATGCTGGTATTCGCGCATTCAGTGTTGATGAA
CTTGATATAGATGAAAAAGGGTGCAAAGAATTGCAGAAAACAATTCAAGAATCAAGAATT
CTCATTGTTGTTTTGTCAAAAGACTATACCTCTTCAGAGAGGTGCCTTGATGAACTTGTG
TTTATACTTGAGAGCAAGAAACTTTTTGGACGTTTCGTTTTACCTGTGTTTTATGATGTG
GATCCATCAGAAGTCAGGAAACAAAAAGGAAGTTTTGAACAAGATTTTTTAATGTATGAA
CAGAGATATAGATCCGGGACCGAGGAAAGGAGACTGGAATGGTTGCAGAAGGTGAAGGAA
TGGAAGGCTTCTCTAACAGAAGTTGCTGATTTGGGAGGAATGGTCTTACAGAATCAATCT
GATGGGTGTGAGTCAAGGTTTATTCAGGAGATTGTGAAGGTGGTTGCAGGAAGACTAAAT
CGTGCAGTTTTGAGTGTAGCTCTCCACCCCGTTGGAATAGATTCTCGAGTTAAAGACATA
AATCTCTGGTTGCAGGATGGATCAACTAGTGTTGATATTATGGCTATATATGGTATGGGG
GGGCTAGGTAAATCTACCCTTGCCAAGACTGCTTATAATCTTAACTTTGACAAATTTGAT
GGCAGCAGCTTTCTTGCTGATGTGAATAAAACTTCAGAAAGATATGATGGTCTGGTAAGT
CTACAAAGACAACTTCTTTCAAATGTTCTAGGGAAGAAGGTTGAAAAGATATACAATGTT
GATGAAGGAGTCATCAAGATTCAAGAGGCCATCCATTGCAGAAGAATTCTTCTTGTTCTC
GATGATGTGGATGATCGAGATCAGCTAAATGCGGTTCTTGGGATGCGAGAATGGTTTTAT
CCAGGTAGTAAAATAATCATAACAACCAGAAATCAGCACCTGTTTGATGCTAGTGAGGTC
TGCAGTTGTAAGATGTATAAGGTCATGCCATTGAATGCTCAAGAATCGATTCGACTCTTC
AGCTGGCATGCTTTTGGAAAAGAAAAACCTTCCGAAGATCATGAGGACCTTTCAGAAAAG
GTGATACTTCATTGTAAAGGAACTCCTTTGGCTCTCAAAGTTTTAGGTTCTTCTCTTTGT
GACAGAAGTATAGAGGTGTGGGAGAGTGCATTAAGGAAGTTAAAGGCAATCCCTGACAAT
AAGATCTTGGAAAAACTTAGAATCAGCTACGATTTGCTGCCAGATGATGATGATGTACAG
AAAATATTCCTTGATATTGTCTGTTTCTTTGTGGGAAAGGATAGAGACTATGCAGTTACT
ATACTCGATGGATGTGGTTTTTTCTCAGTAGTAGGAATTCAGATTCTTTCAGATAGATGT
CTGATAGAAATGGACAAGGATAAGCTGAAAATGCATTCATTGATTCAAGATATGGGAAGA
GAAATTATCCGCCTAGAATCCCCTTGGGAGCCTCAGAAAAGAAGCAGAGTTTGGCGATAC
AGAGATTCCTTCAATATATTGAGTACAAAAACTGGAACTGAAAATATTGAAGGTCTGGTT
CTTGACAAGGGAATGTCCAACAAATTGTCCAAAGCAGTCAAATCTGTCAGATCGTATTTC
TTCAGTGAAGATGCTGGTCCGATAGGTCATGGCTATCCAAGAAAACGCCGCAAGCATTTG
GAGCATTTTGATGATGCCAGCACAGAAGGTTCAGACAGTATAGAATTTGAAGCTGATGCA
TTTTCCAGAATGCAGAGGCTGAGGATTCTCCAGCTTAGTTATGTAAGCTTAACTGGATTC
TATAGTTTGTTTCCGAAAGGCCTAAGATTACTATGTTGGTCTGGATTTCATATGAAGATC
ATCCCTGAGTATCTCCCTATAGAGAGCCTGGTTGCCCTTGAAATGAAAAAAAGTTATTTG
GAAAAAGCCTGGGAGGGAATTAAGATTCTTAGATCATTAAAGATCCTCAACCTTAGTCAT
TCCCATTTTCTAAAAAGAACTCCTGATTTTTCTGGACTTCCCCATCTGAAAACATTGATC
CTGAAAGACTGCATTAAGTTGGTCAAGATTCATGAATCAATTGGATGCCTTGACGGACTT
GTCTATCTGAACTTGAGAGACTGCAAGAATCTAAGGAAACTCCCTGGAAGCCTTTGTAAG
CTCAAATCCTTAGAAAAACTTATTATCTCTGGCTGTTCTAGACTAGTTACGTCAGCAATA
GAGCTAGGCAAGTTAGAATCATTGACAACCCTGCAGGCTGATGGAATGAATTTTGGACAG
CTAGCCCCGGTGGGTGGTAACATGAATTCATGGAGTGCCCTCTGGAAAACTTGGTCATCA
AAGTTGAGAAGATCCCCAGGCTCTAACCAGTTTTCGTTCTCTTCTTTATCAAGTTCGCTC
GTCAGCTTAAGTCTTTCTAGTTGCAACTTAACAGACGATGCTCTATCCTTCGGCCTCAGC
AACCTTCCCTCATTATGCTTCTTGAATCTAAGTGAAAACTTGATTTATAACCTGCCTCAG
AGTATCAAAAATCTTGGTAAGCTCCAAGACCTTTGGTTAGATGGATGTCAAAGCCTCCTA
TCTCTGCCAGAGCTTCCGTCAAGCCTTGTTAAGCTAAAGGCAGTTAGATGCTCATCACTG
GAAACAGTCACAAATCTACCAAACCTAATGACAACTCTCTTTTTAGATGTCATGGAAAGT
GAGAGCTTAACTGAGATTTCAGGAATTTTCAAGCTAAAGCCCATTGATAATTTTGAAGTG
GAAATATTGAATGCTCTACGCCTTCTTCTCAACCTAGATAACACATTCGATACAGTGGTG
GAAATATTTAATAGGTTCACCAAAACAAAAAGGATGTATTCAGTACAGCAGGGACTCTAT
GAATTTGGAATCTTCAGTACTTATTTTCCAGGAAATGAGGTTCCAAGCTGGTTCAGCAAC
AAAAGTGAACAGAGATTGTTGACATTGTATGTGGATTCACTTCCTAATATCAAGATAACA
GGACTGCTTATTTGCATCGTCTATGCACGTTCTAGTCCTCGTATATTTAGCTATTTTAGT
AAATTCGTGGGATCTCATACAATTGACATCAAAGTCCAAAACATAACACAGGGTCTTAAG
TGGATTTATGCCCCATCATTCATTGGCATTCCAGGAGAGAACAACAAGTTGACATTTTTA
TGCCACTGGAAGTTTGGCAAGTATTTACAAACAGGTGATCAGATTAATGTTTCATTGCCT
TGTTGGGGTAAAACTTTTAAGATGAAAGAGTTTGGAGCTACACTTGCTTATAACAATCCA
GATTTAGACCAGTCCTCAGCATCTACTAGTGAAACAAGAGTGCTTGCAACGCGACATACT
CCACTTAGTGATTATCAATCTGAAGAAAGTGTCATGGAAGGCTTCATGCCTTTATATCAG
TTGGCGGTTCATCATTACTATCTTTCTCACCCTGAGTACTATGTCATGCGTGACAATGCA
GATTTTGTTGTGAGGGCAATCTTGAACGAGAAATTGTTCGAGGATTATGATGTGCAGACT
GCAGGTTCAGGGGCAGAAGAAGAGGATGATGATGATAGCATCTTCGATTATGATGAGGAT
GAAGACGAAGAGGCTGCACTAGCAGAGCTCGAGGAGCTGTTGGAAAGATCTTGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031803
PEP Infomation

pacid=37436107 transcript=PGSC0003DMT400047001 locus=PGSC0003DMG400018256 ID=PGSC0003DMT400047001.v4.03 annot-version=v4.03
Sequence

MSQFAFHAFLSLATKTGKSFGNHLHSALSNAGIRAFSVDELDIDEKGCKELQKTIQESRI
LIVVLSKDYTSSERCLDELVFILESKKLFGRFVLPVFYDVDPSEVRKQKGSFEQDFLMYE
QRYRSGTEERRLEWLQKVKEWKASLTEVADLGGMVLQNQSDGCESRFIQEIVKVVAGRLN
RAVLSVALHPVGIDSRVKDINLWLQDGSTSVDIMAIYGMGGLGKSTLAKTAYNLNFDKFD
GSSFLADVNKTSERYDGLVSLQRQLLSNVLGKKVEKIYNVDEGVIKIQEAIHCRRILLVL
DDVDDRDQLNAVLGMREWFYPGSKIIITTRNQHLFDASEVCSCKMYKVMPLNAQESIRLF
SWHAFGKEKPSEDHEDLSEKVILHCKGTPLALKVLGSSLCDRSIEVWESALRKLKAIPDN
KILEKLRISYDLLPDDDDVQKIFLDIVCFFVGKDRDYAVTILDGCGFFSVVGIQILSDRC
LIEMDKDKLKMHSLIQDMGREIIRLESPWEPQKRSRVWRYRDSFNILSTKTGTENIEGLV
LDKGMSNKLSKAVKSVRSYFFSEDAGPIGHGYPRKRRKHLEHFDDASTEGSDSIEFEADA
FSRMQRLRILQLSYVSLTGFYSLFPKGLRLLCWSGFHMKIIPEYLPIESLVALEMKKSYL
EKAWEGIKILRSLKILNLSHSHFLKRTPDFSGLPHLKTLILKDCIKLVKIHESIGCLDGL
VYLNLRDCKNLRKLPGSLCKLKSLEKLIISGCSRLVTSAIELGKLESLTTLQADGMNFGQ
LAPVGGNMNSWSALWKTWSSKLRRSPGSNQFSFSSLSSSLVSLSLSSCNLTDDALSFGLS
NLPSLCFLNLSENLIYNLPQSIKNLGKLQDLWLDGCQSLLSLPELPSSLVKLKAVRCSSL
ETVTNLPNLMTTLFLDVMESESLTEISGIFKLKPIDNFEVEILNALRLLLNLDNTFDTVV
EIFNRFTKTKRMYSVQQGLYEFGIFSTYFPGNEVPSWFSNKSEQRLLTLYVDSLPNIKIT
GLLICIVYARSSPRIFSYFSKFVGSHTIDIKVQNITQGLKWIYAPSFIGIPGENNKLTFL
CHWKFGKYLQTGDQINVSLPCWGKTFKMKEFGATLAYNNPDLDQSSASTSETRVLATRHT
PLSDYQSEESVMEGFMPLYQLAVHHYYLSHPEYYVMRDNADFVVRAILNEKLFEDYDVQT
AGSGAEEEDDDDSIFDYDEDEDEEAALAELEELLERSW*

Transcript Sequence

Transcript ID

PGSC0003DMT400047001
Transcript Infomation

pacid=37436107 locus=PGSC0003DMG400018256 ID=PGSC0003DMT400047001.v4.03 annot-version=v4.03
Sequence

ATGTCTCAGTTTGCTTTTCATGCATTTCTGAGTTTGGCAACAAAAACAGGCAAGTCTTTT
GGAAATCATCTTCATTCAGCTTTATCAAATGCTGGTATTCGCGCATTCAGTGTTGATGAA
CTTGATATAGATGAAAAAGGGTGCAAAGAATTGCAGAAAACAATTCAAGAATCAAGAATT
CTCATTGTTGTTTTGTCAAAAGACTATACCTCTTCAGAGAGGTGCCTTGATGAACTTGTG
TTTATACTTGAGAGCAAGAAACTTTTTGGACGTTTCGTTTTACCTGTGTTTTATGATGTG
GATCCATCAGAAGTCAGGAAACAAAAAGGAAGTTTTGAACAAGATTTTTTAATGTATGAA
CAGAGATATAGATCCGGGACCGAGGAAAGGAGACTGGAATGGTTGCAGAAGGTGAAGGAA
TGGAAGGCTTCTCTAACAGAAGTTGCTGATTTGGGAGGAATGGTCTTACAGAATCAATCT
GATGGGTGTGAGTCAAGGTTTATTCAGGAGATTGTGAAGGTGGTTGCAGGAAGACTAAAT
CGTGCAGTTTTGAGTGTAGCTCTCCACCCCGTTGGAATAGATTCTCGAGTTAAAGACATA
AATCTCTGGTTGCAGGATGGATCAACTAGTGTTGATATTATGGCTATATATGGTATGGGG
GGGCTAGGTAAATCTACCCTTGCCAAGACTGCTTATAATCTTAACTTTGACAAATTTGAT
GGCAGCAGCTTTCTTGCTGATGTGAATAAAACTTCAGAAAGATATGATGGTCTGGTAAGT
CTACAAAGACAACTTCTTTCAAATGTTCTAGGGAAGAAGGTTGAAAAGATATACAATGTT
GATGAAGGAGTCATCAAGATTCAAGAGGCCATCCATTGCAGAAGAATTCTTCTTGTTCTC
GATGATGTGGATGATCGAGATCAGCTAAATGCGGTTCTTGGGATGCGAGAATGGTTTTAT
CCAGGTAGTAAAATAATCATAACAACCAGAAATCAGCACCTGTTTGATGCTAGTGAGGTC
TGCAGTTGTAAGATGTATAAGGTCATGCCATTGAATGCTCAAGAATCGATTCGACTCTTC
AGCTGGCATGCTTTTGGAAAAGAAAAACCTTCCGAAGATCATGAGGACCTTTCAGAAAAG
GTGATACTTCATTGTAAAGGAACTCCTTTGGCTCTCAAAGTTTTAGGTTCTTCTCTTTGT
GACAGAAGTATAGAGGTGTGGGAGAGTGCATTAAGGAAGTTAAAGGCAATCCCTGACAAT
AAGATCTTGGAAAAACTTAGAATCAGCTACGATTTGCTGCCAGATGATGATGATGTACAG
AAAATATTCCTTGATATTGTCTGTTTCTTTGTGGGAAAGGATAGAGACTATGCAGTTACT
ATACTCGATGGATGTGGTTTTTTCTCAGTAGTAGGAATTCAGATTCTTTCAGATAGATGT
CTGATAGAAATGGACAAGGATAAGCTGAAAATGCATTCATTGATTCAAGATATGGGAAGA
GAAATTATCCGCCTAGAATCCCCTTGGGAGCCTCAGAAAAGAAGCAGAGTTTGGCGATAC
AGAGATTCCTTCAATATATTGAGTACAAAAACTGGAACTGAAAATATTGAAGGTCTGGTT
CTTGACAAGGGAATGTCCAACAAATTGTCCAAAGCAGTCAAATCTGTCAGATCGTATTTC
TTCAGTGAAGATGCTGGTCCGATAGGTCATGGCTATCCAAGAAAACGCCGCAAGCATTTG
GAGCATTTTGATGATGCCAGCACAGAAGGTTCAGACAGTATAGAATTTGAAGCTGATGCA
TTTTCCAGAATGCAGAGGCTGAGGATTCTCCAGCTTAGTTATGTAAGCTTAACTGGATTC
TATAGTTTGTTTCCGAAAGGCCTAAGATTACTATGTTGGTCTGGATTTCATATGAAGATC
ATCCCTGAGTATCTCCCTATAGAGAGCCTGGTTGCCCTTGAAATGAAAAAAAGTTATTTG
GAAAAAGCCTGGGAGGGAATTAAGATTCTTAGATCATTAAAGATCCTCAACCTTAGTCAT
TCCCATTTTCTAAAAAGAACTCCTGATTTTTCTGGACTTCCCCATCTGAAAACATTGATC
CTGAAAGACTGCATTAAGTTGGTCAAGATTCATGAATCAATTGGATGCCTTGACGGACTT
GTCTATCTGAACTTGAGAGACTGCAAGAATCTAAGGAAACTCCCTGGAAGCCTTTGTAAG
CTCAAATCCTTAGAAAAACTTATTATCTCTGGCTGTTCTAGACTAGTTACGTCAGCAATA
GAGCTAGGCAAGTTAGAATCATTGACAACCCTGCAGGCTGATGGAATGAATTTTGGACAG
CTAGCCCCGGTGGGTGGTAACATGAATTCATGGAGTGCCCTCTGGAAAACTTGGTCATCA
AAGTTGAGAAGATCCCCAGGCTCTAACCAGTTTTCGTTCTCTTCTTTATCAAGTTCGCTC
GTCAGCTTAAGTCTTTCTAGTTGCAACTTAACAGACGATGCTCTATCCTTCGGCCTCAGC
AACCTTCCCTCATTATGCTTCTTGAATCTAAGTGAAAACTTGATTTATAACCTGCCTCAG
AGTATCAAAAATCTTGGTAAGCTCCAAGACCTTTGGTTAGATGGATGTCAAAGCCTCCTA
TCTCTGCCAGAGCTTCCGTCAAGCCTTGTTAAGCTAAAGGCAGTTAGATGCTCATCACTG
GAAACAGTCACAAATCTACCAAACCTAATGACAACTCTCTTTTTAGATGTCATGGAAAGT
GAGAGCTTAACTGAGATTTCAGGAATTTTCAAGCTAAAGCCCATTGATAATTTTGAAGTG
GAAATATTGAATGCTCTACGCCTTCTTCTCAACCTAGATAACACATTCGATACAGTGGTG
GAAATATTTAATAGGTTCACCAAAACAAAAAGGATGTATTCAGTACAGCAGGGACTCTAT
GAATTTGGAATCTTCAGTACTTATTTTCCAGGAAATGAGGTTCCAAGCTGGTTCAGCAAC
AAAAGTGAACAGAGATTGTTGACATTGTATGTGGATTCACTTCCTAATATCAAGATAACA
GGACTGCTTATTTGCATCGTCTATGCACGTTCTAGTCCTCGTATATTTAGCTATTTTAGT
AAATTCGTGGGATCTCATACAATTGACATCAAAGTCCAAAACATAACACAGGGTCTTAAG
TGGATTTATGCCCCATCATTCATTGGCATTCCAGGAGAGAACAACAAGTTGACATTTTTA
TGCCACTGGAAGTTTGGCAAGTATTTACAAACAGGTGATCAGATTAATGTTTCATTGCCT
TGTTGGGGTAAAACTTTTAAGATGAAAGAGTTTGGAGCTACACTTGCTTATAACAATCCA
GATTTAGACCAGTCCTCAGCATCTACTAGTGAAACAAGAGTGCTTGCAACGCGACATACT
CCACTTAGTGATTATCAATCTGAAGAAAGTGTCATGGAAGGCTTCATGCCTTTATATCAG
TTGGCGGTTCATCATTACTATCTTTCTCACCCTGAGTACTATGTCATGCGTGACAATGCA
GATTTTGTTGTGAGGGCAATCTTGAACGAGAAATTGTTCGAGGATTATGATGTGCAGACT
GCAGGTTCAGGGGCAGAAGAAGAGGATGATGATGATAGCATCTTCGATTATGATGAGGAT
GAAGACGAAGAGGCTGCACTAGCAGAGCTCGAGGAGCTGTTGGAAAGATCTTGGTGA