Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046991
CDS Infomation

pacid=37440822 polypeptide=PGSC0003DMP400031796 locus=PGSC0003DMG400018251 ID=PGSC0003DMT400046991.v4.03 annot-version=v4.03
Sequence

ATGGCAAAGGGAGAAGCCGTCGCTGTTAAAGATGCTGTCCACAAATTACAACTCTGTCTT
CTTGAAGGCATCAAAGATGAAAACCAACTCATTGCTGCTGGATCTCTGTTGTCTCGGAGT
GATTATCAGGATGTAGTAACTGAACGATCAATAGCTAACATGTGTGGTTATCCTCTTTGC
AGCAATTCTCTGCCTTCTGAAAGGTCTCGGAAAGGACATTACAGAATATCATTGAAGGAG
CATAAAGTTTATGATCTTCATGAAACATACATGTACTGTTCAACAAATTGTGTTGTCAAT
AGCGGAGCATTTGCTGGTAGCTTGCAGGATGAGAGAAGTTCTACACTGAATCCAGCAAAG
CTTAATCAAGTCCTGAATCTATTTAAGGGGTTGCATTTACATTCCCCAGAAGATGTGAAG
GAAAATGGAGATCTAGGATCTTCTAAGTTGAAAATCCAGGAAAAAGTGGATGTAAAGGGG
GGTGGTGAAGTTTCATTGGAAGAGTGGATGGGTCCATCTAATGCAATTGAAGGCTATGTT
CCACAGAGAGATCGAAGTGTGAATCCAGCACTGTTGAAAAACATTAACAAAGGATTCAAG
AATAAGCATGCCAGACTCCAAGATGAGAAAAACATGATACTTAATGAGTTTGATTTTTCC
AGCACTATAATAACTCAAGATGAGTATAGCGTTTCAAAGTTTCCAGCTCCTGTAAATGCT
GTCTCGAGTGAAAAGTTCAAAGAAGCCCAAGCGAAGACGAGGTACAAAGTTAGGGATGAT
GATGTTTCTATACTGGGAAAGCGAGTTGATGCCTTGCAGTTGCGTTCTGGAGAAGAAACA
GAAAAATCGGATAAGAACACTAGATTTTTGAAGGTGGACAAATTTAATTCTGGTGAAGTG
TCTTCTGGTCCTTCCCAACATGATGTCAAGAACAAAAGTGTCCTAATTATGTCGGATGAC
GGAAGGAAATATGCATCCCATGGTGAACATGATAAACAATTACTCAAATCTTCTTTAAAA
TCTTCAAATTCCAAGAAAATGTCTCAGTCAGTTACTTGGGCTGATGAAATTATCGATGGT
GGCATTGGCAAGAAAACAGAGAGCTCATCCAAAATATCAGAATATGAGAACCAAGCTTAT
GGGGGATCAGCCTCTACTGACATGGAAGAGGATGATGATTCATATCGGTTTGAATCTGCA
GAAGCCTGTGCAGCAGCACTAAGCCAAGCAGCAGAGGCTGTTGCCTCAGGTTCTGATGTC
CCTGATGCTGTGTCCAAAGCCGGGATTGTAATATTGCCAACTTCACAAGAAGTGGATGAA
GCAATACTTCAGGAGACTGAGATGCTTGATATAGAACCAGCTCCTTTAAAATGGCCAAGA
AAACCAGGGATGCCAAATTATGATGTTTTTGAATCAGAGGACTGTTGGTATGATGGTCCA
CCCGAGGGGTTTAATATGACTCTGTCACCTTTCGCAACAATGTTTAATTCCCTCTTCACA
TGGATATCATCATCGTCCTTGGCATTTATATATGGGCATGATGAAAACAATAATGAGGAG
TATTTGTCTATCAATGGAAGAGAATATCCTCACAAAATTGTGTTGTCTGATGGCCTGTCA
ACTGAGATCAAGCAGACTCTAGCTGGCTGTCTTGCTCGAGCATTGCCGGGATTGGTTGCT
GACCTTAGGCTGCCAGTACCAATATCAACTTTAGAGCAAGGAATGGTTCTCCTCTTAAAT
ACAATGTCTTTTGTGGATCCACTCCCTGCATTCCGAATGAAGCAGTGGCAACTTATTGTA
CTTCTGTTTCTTGATGCCCTTTCTGTATGTAGGATACCCACACTGACTCCATATATGACA
GGGCGAAGGACTTCGCTTCCAAAGGTGCTTGATGGTGCTCAGATAAGCACAGCGGAATAT
GAGATCATGAAAGATCTAATCATTCCACTAGGTCGAGTGCCTCAGTTCTCAATGCAAAGT
GGAGGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400031796
PEP Infomation

pacid=37440822 transcript=PGSC0003DMT400046991 locus=PGSC0003DMG400018251 ID=PGSC0003DMT400046991.v4.03 annot-version=v4.03
Sequence

MAKGEAVAVKDAVHKLQLCLLEGIKDENQLIAAGSLLSRSDYQDVVTERSIANMCGYPLC
SNSLPSERSRKGHYRISLKEHKVYDLHETYMYCSTNCVVNSGAFAGSLQDERSSTLNPAK
LNQVLNLFKGLHLHSPEDVKENGDLGSSKLKIQEKVDVKGGGEVSLEEWMGPSNAIEGYV
PQRDRSVNPALLKNINKGFKNKHARLQDEKNMILNEFDFSSTIITQDEYSVSKFPAPVNA
VSSEKFKEAQAKTRYKVRDDDVSILGKRVDALQLRSGEETEKSDKNTRFLKVDKFNSGEV
SSGPSQHDVKNKSVLIMSDDGRKYASHGEHDKQLLKSSLKSSNSKKMSQSVTWADEIIDG
GIGKKTESSSKISEYENQAYGGSASTDMEEDDDSYRFESAEACAAALSQAAEAVASGSDV
PDAVSKAGIVILPTSQEVDEAILQETEMLDIEPAPLKWPRKPGMPNYDVFESEDCWYDGP
PEGFNMTLSPFATMFNSLFTWISSSSLAFIYGHDENNNEEYLSINGREYPHKIVLSDGLS
TEIKQTLAGCLARALPGLVADLRLPVPISTLEQGMVLLLNTMSFVDPLPAFRMKQWQLIV
LLFLDALSVCRIPTLTPYMTGRRTSLPKVLDGAQISTAEYEIMKDLIIPLGRVPQFSMQS
GG*

Transcript Sequence

Transcript ID

PGSC0003DMT400046991
Transcript Infomation

pacid=37440822 locus=PGSC0003DMG400018251 ID=PGSC0003DMT400046991.v4.03 annot-version=v4.03
Sequence

ATGGCAAAGGGAGAAGCCGTCGCTGTTAAAGATGCTGTCCACAAATTACAACTCTGTCTT
CTTGAAGGCATCAAAGATGAAAACCAACTCATTGCTGCTGGATCTCTGTTGTCTCGGAGT
GATTATCAGGATGTAGTAACTGAACGATCAATAGCTAACATGTGTGGTTATCCTCTTTGC
AGCAATTCTCTGCCTTCTGAAAGGTCTCGGAAAGGACATTACAGAATATCATTGAAGGAG
CATAAAGTTTATGATCTTCATGAAACATACATGTACTGTTCAACAAATTGTGTTGTCAAT
AGCGGAGCATTTGCTGGTAGCTTGCAGGATGAGAGAAGTTCTACACTGAATCCAGCAAAG
CTTAATCAAGTCCTGAATCTATTTAAGGGGTTGCATTTACATTCCCCAGAAGATGTGAAG
GAAAATGGAGATCTAGGATCTTCTAAGTTGAAAATCCAGGAAAAAGTGGATGTAAAGGGG
GGTGGTGAAGTTTCATTGGAAGAGTGGATGGGTCCATCTAATGCAATTGAAGGCTATGTT
CCACAGAGAGATCGAAGTGTGAATCCAGCACTGTTGAAAAACATTAACAAAGGATTCAAG
AATAAGCATGCCAGACTCCAAGATGAGAAAAACATGATACTTAATGAGTTTGATTTTTCC
AGCACTATAATAACTCAAGATGAGTATAGCGTTTCAAAGTTTCCAGCTCCTGTAAATGCT
GTCTCGAGTGAAAAGTTCAAAGAAGCCCAAGCGAAGACGAGGTACAAAGTTAGGGATGAT
GATGTTTCTATACTGGGAAAGCGAGTTGATGCCTTGCAGTTGCGTTCTGGAGAAGAAACA
GAAAAATCGGATAAGAACACTAGATTTTTGAAGGTGGACAAATTTAATTCTGGTGAAGTG
TCTTCTGGTCCTTCCCAACATGATGTCAAGAACAAAAGTGTCCTAATTATGTCGGATGAC
GGAAGGAAATATGCATCCCATGGTGAACATGATAAACAATTACTCAAATCTTCTTTAAAA
TCTTCAAATTCCAAGAAAATGTCTCAGTCAGTTACTTGGGCTGATGAAATTATCGATGGT
GGCATTGGCAAGAAAACAGAGAGCTCATCCAAAATATCAGAATATGAGAACCAAGCTTAT
GGGGGATCAGCCTCTACTGACATGGAAGAGGATGATGATTCATATCGGTTTGAATCTGCA
GAAGCCTGTGCAGCAGCACTAAGCCAAGCAGCAGAGGCTGTTGCCTCAGGTTCTGATGTC
CCTGATGCTGTGTCCAAAGCCGGGATTGTAATATTGCCAACTTCACAAGAAGTGGATGAA
GCAATACTTCAGGAGACTGAGATGCTTGATATAGAACCAGCTCCTTTAAAATGGCCAAGA
AAACCAGGGATGCCAAATTATGATGTTTTTGAATCAGAGGACTGTTGGTATGATGGTCCA
CCCGAGGGGTTTAATATGACTCTGTCACCTTTCGCAACAATGTTTAATTCCCTCTTCACA
TGGATATCATCATCGTCCTTGGCATTTATATATGGGCATGATGAAAACAATAATGAGGAG
TATTTGTCTATCAATGGAAGAGAATATCCTCACAAAATTGTGTTGTCTGATGGCCTGTCA
ACTGAGATCAAGCAGACTCTAGCTGGCTGTCTTGCTCGAGCATTGCCGGGATTGGTTGCT
GACCTTAGGCTGCCAGTACCAATATCAACTTTAGAGCAAGGAATGGTTCTCCTCTTAAAT
ACAATGTCTTTTGTGGATCCACTCCCTGCATTCCGAATGAAGCAGTGGCAACTTATTGTA
CTTCTGTTTCTTGATGCCCTTTCTGTATGTAGGATACCCACACTGACTCCATATATGACA
GGGCGAAGGACTTCGCTTCCAAAGGTGCTTGATGGTGCTCAGATAAGCACAGCGGAATAT
GAGATCATGAAAGATCTAATCATTCCACTAGGTCGAGTGCCTCAGTTCTCAATGCAAAGT
GGAGGCTAG