Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046987
CDS Infomation

pacid=37440896 polypeptide=PGSC0003DMP400031792 locus=PGSC0003DMG400018250 ID=PGSC0003DMT400046987.v4.03 annot-version=v4.03
Sequence

ATGCCAGAACAAAGACCAGGAAATGGCCCTCCTGCAAATGGGAATGCAGCAGGTGGAAAT
GCTTACACAATTGACTTGCCTACTTTTAGTAAGCGACTGAAGGACTTATATTCACACTGG
CGTGAACATAAAGATGAGTGGGGTTCTTCTGATGTCCTTGCTATAGCTACTCCACCACCT
TCAGAGGACTTAAGATACTTAAAATCCTCGGCTGTAAATGTATGGTTACTTGGGTATGAG
TTCCCTGAGACTATAATGGTCTTTGGGAACAAGCAGATACATTTTCTGTGTAGCCAAAAG
AAAGCTTCATTGCTGGATGTTGTGAAATTGACTGCTAAAGAGGCTGTGGGAGTGGAAGTT
GTCACACATGTGAAGACCAAAGGTGAAGATGGGACTACTAAAATGGACAAAGTGCTCCAT
GCTATTCATGTGCAGTCATTATCAGATGCTTATGATACTCCTGTTATTGGATATATTGCA
CGAGAAGGCCCTGAAGGAAAGCTCTTGGAGGCATGGACTAAGAAGATGAAAGATTCTGGC
CTTCAGCTTAATGATATAACAAGTGGACTTTCTGACCTTTTTGCTGTGAAGGACCAAAAT
GAGCTTGTTAATGTGAAGAAAGCTGCACATCTGACTGCTTCTGCTATGAAGAACTTTGTT
GTTCCAAAGCTTGAGAAAATAATTGATGAGGAGAAGAAAGTAACTCATTCCTCGTTGATG
GACGACACAGAAAAGGCTATTCTAGAGCCTGCTAAAGTCAAGGTGAAGCTGAAAGCTGAG
AATGTGGATATATGTTACCCTCCAATTTTCCAGAGTGGTGGTATTTTTGATCTTAGACCT
AGTGCTACAAGCAATGATGATGGTTTGTATTATGATTCTGCCAGTGCCATCATATGTGCA
ATTGGTTCACGATACAGCAGCTACTGTTCGAATCTTGCCAGAACGTTTCTAATTGATTCC
ACTCAGATGCAGACCAAGGCTTATGAGGTGCTTCTTAAAACCCAGGAGGCGGCAATAAGT
GCATTGAAACCTGGTAACAAGGTTAGTGCTGTTTATCAAGCAGCTCTTGCTGTGGTTGAC
AGGGATGCTCCTGAATTGGTGAACAACCTGACAAAGTCTGCTGGGACAGGGATTGGTCTT
GAGTTTCGAGAGTCAGGGTTGATCCTAAATGCTAAAAATGATAAACTGTTGAGACCGGGA
ATGGTTTTCAATGTGTCACTTGGTTTCCACAATCTGCAGAATGAGACCAACAAAGAAAAG
AGCCGGAATTTTTCACTTTTGCTAGCAGATACTGTGATAGTCACTAAGGATGGTCGTGAT
GTGATCACCCATTTGAGCTCCAAAGCTTTGAAGGATGTGGCCTATTCTTTCAATGAAGAT
GAAGAAGAAGAGGAGCCACAAATGAAAGCAGAGTCCAATGGTAGGGATACCATGTATTCC
AAGGCAACACTTAGGTCTGACAATCATGAGATTTCAAGAGAAGAGAAGCGAAGGCAGCAC
CAGGAAGAACTTGCCCGTCAGAAGAATGAAGAGACTGCTCGACGTCTTGCTGGTGAAGAA
ACATTAACCGGGAATAACAGGAGTGCTAGGACTTCGACTGACGTTGTTGCCTATAAGAAT
GTCAATGACCTACCACCACCCAGAGAGATGATTATTCAGGTTGACCAAAAGAATGAGGCC
ATCCTTTTACCAATATATGGTAATATGGTTCCTTTCCATGTGGCTACTGTTAAGACTGTT
TCAAGCCAACAGGACTACATCCGAATCATATTTAATGTTCCTGGTACCCCTTTCTCACCT
ACTGATGTGAAGAATCAAGGTGCCATCTACCTAAAAGAAGTTTCATTTCGTTCCAAGGAT
CATAGGCACATAAGTGAAATGGTCCAGGTGATTAAAACACTTAGACGTAATTATATGTCA
AGGGAGTCTGAGAGAGCCGAAAGAGCAACTTTAGTGACTCAGGAAAAACTTGTCCTTGCA
GGGAATAAATTCAAGCCAGTTAGGCTGCCTGACTTATGGATCCGTCCCACATTTGGTGGT
CGTGCACGAAAGCTTGCTGGTACACTGGAAGCTCATGCCAATGGTTTCCGGTATTCAACC
ACAAGACAAGATGAACGTGTTGACATCTTGTATGGTAATATCAAGCATGTGTTCTTCCAG
CCAGCAGAGAAGGAGATGGTTACCCTTCTTCACTTTCATCTGCACAACCACATAATGGTG
GGGAAAAAAAAGACAAAGGATGTTCAGTTCTATGTTGAGGTAATGGATGTGGTCCAAACG
CTTGGAGGTGGAAAGAGGTCTGCATATGATCCAGATGAGATTGAGGAAGAACAGAGGGAA
AGAGATCGAAAGAACAAAATCAACATGGACTTCCAGAGTTTTGTGAACAGGGTGAATGAT
ATTTGGAGCCAGCCTCAGTTCAAGGGATTCGACCTGGAGTTTGATCAACCTCTGAGAGAA
CTTGGGTTCCATGGTGTTCCCTATAAATCATCAGCTTTCATTGTACCAACCTCCAGCTGT
TTGGTTGAGCTGGTAGAGACGCCATTCCTTGTGATAACCCTAAGTGAGATTGAGATTGTT
AACTTGGAGAGAGTTGGATTTGGGCAGAAGAACTGTGATATGGCTATTGTTTTCAAGGAC
TTCAAGCGCGATGTCATGCGGATAGATTCAATCCCTATTTCATCCCTTGATGGCATCAAG
GAATGGCTTGACACAACTGACATCAAGTATTATGAGAGCAAGGTGAATCTGAATTGGCGT
CAAGTACTGAAGACCATAACTGATGAACCACAGAAATTCATTGATGAAGGTGGTTGGGAA
TTCTTAAACTTGGAAGGTACTGATTCATCATCTGGAGATTCAGAGTCGGACCAAGGTTAT
GAACCTTCGGATGCTGAACCTGAGTCTGACTCTGATGATGAAGAGTCTGATAGTGAATCT
CTGGTTGACTCTGAAGATGATGAAGAAGAGGATGACAATGAAGATTCAGAGGAAGAAAAA
GGTAAAACATGGGAAGAGCTGGAGAAAGAAGCAAGCTATGCCGACAGGGAGATTAATGAA
TCAGATAGTGAGGATGAGAAGAGGAAAAAGAAGAACTTTGGCAAGTCACGAGCTGCTCCT
AGTTCTGCTGCCAGCAAGCGAATGAAGTTCAGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400031792
PEP Infomation

pacid=37440896 transcript=PGSC0003DMT400046987 locus=PGSC0003DMG400018250 ID=PGSC0003DMT400046987.v4.03 annot-version=v4.03
Sequence

MPEQRPGNGPPANGNAAGGNAYTIDLPTFSKRLKDLYSHWREHKDEWGSSDVLAIATPPP
SEDLRYLKSSAVNVWLLGYEFPETIMVFGNKQIHFLCSQKKASLLDVVKLTAKEAVGVEV
VTHVKTKGEDGTTKMDKVLHAIHVQSLSDAYDTPVIGYIAREGPEGKLLEAWTKKMKDSG
LQLNDITSGLSDLFAVKDQNELVNVKKAAHLTASAMKNFVVPKLEKIIDEEKKVTHSSLM
DDTEKAILEPAKVKVKLKAENVDICYPPIFQSGGIFDLRPSATSNDDGLYYDSASAIICA
IGSRYSSYCSNLARTFLIDSTQMQTKAYEVLLKTQEAAISALKPGNKVSAVYQAALAVVD
RDAPELVNNLTKSAGTGIGLEFRESGLILNAKNDKLLRPGMVFNVSLGFHNLQNETNKEK
SRNFSLLLADTVIVTKDGRDVITHLSSKALKDVAYSFNEDEEEEEPQMKAESNGRDTMYS
KATLRSDNHEISREEKRRQHQEELARQKNEETARRLAGEETLTGNNRSARTSTDVVAYKN
VNDLPPPREMIIQVDQKNEAILLPIYGNMVPFHVATVKTVSSQQDYIRIIFNVPGTPFSP
TDVKNQGAIYLKEVSFRSKDHRHISEMVQVIKTLRRNYMSRESERAERATLVTQEKLVLA
GNKFKPVRLPDLWIRPTFGGRARKLAGTLEAHANGFRYSTTRQDERVDILYGNIKHVFFQ
PAEKEMVTLLHFHLHNHIMVGKKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIEEEQRE
RDRKNKINMDFQSFVNRVNDIWSQPQFKGFDLEFDQPLRELGFHGVPYKSSAFIVPTSSC
LVELVETPFLVITLSEIEIVNLERVGFGQKNCDMAIVFKDFKRDVMRIDSIPISSLDGIK
EWLDTTDIKYYESKVNLNWRQVLKTITDEPQKFIDEGGWEFLNLEGTDSSSGDSESDQGY
EPSDAEPESDSDDEESDSESLVDSEDDEEEDDNEDSEEEKGKTWEELEKEASYADREINE
SDSEDEKRKKKNFGKSRAAPSSAASKRMKFR*

Transcript Sequence

Transcript ID

PGSC0003DMT400046987
Transcript Infomation

pacid=37440896 locus=PGSC0003DMG400018250 ID=PGSC0003DMT400046987.v4.03 annot-version=v4.03
Sequence

ATGCCAGAACAAAGACCAGGAAATGGCCCTCCTGCAAATGGGAATGCAGCAGGTGGAAAT
GCTTACACAATTGACTTGCCTACTTTTAGTAAGCGACTGAAGGACTTATATTCACACTGG
CGTGAACATAAAGATGAGTGGGGTTCTTCTGATGTCCTTGCTATAGCTACTCCACCACCT
TCAGAGGACTTAAGATACTTAAAATCCTCGGCTGTAAATGTATGGTTACTTGGGTATGAG
TTCCCTGAGACTATAATGGTCTTTGGGAACAAGCAGATACATTTTCTGTGTAGCCAAAAG
AAAGCTTCATTGCTGGATGTTGTGAAATTGACTGCTAAAGAGGCTGTGGGAGTGGAAGTT
GTCACACATGTGAAGACCAAAGGTGAAGATGGGACTACTAAAATGGACAAAGTGCTCCAT
GCTATTCATGTGCAGTCATTATCAGATGCTTATGATACTCCTGTTATTGGATATATTGCA
CGAGAAGGCCCTGAAGGAAAGCTCTTGGAGGCATGGACTAAGAAGATGAAAGATTCTGGC
CTTCAGCTTAATGATATAACAAGTGGACTTTCTGACCTTTTTGCTGTGAAGGACCAAAAT
GAGCTTGTTAATGTGAAGAAAGCTGCACATCTGACTGCTTCTGCTATGAAGAACTTTGTT
GTTCCAAAGCTTGAGAAAATAATTGATGAGGAGAAGAAAGTAACTCATTCCTCGTTGATG
GACGACACAGAAAAGGCTATTCTAGAGCCTGCTAAAGTCAAGGTGAAGCTGAAAGCTGAG
AATGTGGATATATGTTACCCTCCAATTTTCCAGAGTGGTGGTATTTTTGATCTTAGACCT
AGTGCTACAAGCAATGATGATGGTTTGTATTATGATTCTGCCAGTGCCATCATATGTGCA
ATTGGTTCACGATACAGCAGCTACTGTTCGAATCTTGCCAGAACGTTTCTAATTGATTCC
ACTCAGATGCAGACCAAGGCTTATGAGGTGCTTCTTAAAACCCAGGAGGCGGCAATAAGT
GCATTGAAACCTGGTAACAAGGTTAGTGCTGTTTATCAAGCAGCTCTTGCTGTGGTTGAC
AGGGATGCTCCTGAATTGGTGAACAACCTGACAAAGTCTGCTGGGACAGGGATTGGTCTT
GAGTTTCGAGAGTCAGGGTTGATCCTAAATGCTAAAAATGATAAACTGTTGAGACCGGGA
ATGGTTTTCAATGTGTCACTTGGTTTCCACAATCTGCAGAATGAGACCAACAAAGAAAAG
AGCCGGAATTTTTCACTTTTGCTAGCAGATACTGTGATAGTCACTAAGGATGGTCGTGAT
GTGATCACCCATTTGAGCTCCAAAGCTTTGAAGGATGTGGCCTATTCTTTCAATGAAGAT
GAAGAAGAAGAGGAGCCACAAATGAAAGCAGAGTCCAATGGTAGGGATACCATGTATTCC
AAGGCAACACTTAGGTCTGACAATCATGAGATTTCAAGAGAAGAGAAGCGAAGGCAGCAC
CAGGAAGAACTTGCCCGTCAGAAGAATGAAGAGACTGCTCGACGTCTTGCTGGTGAAGAA
ACATTAACCGGGAATAACAGGAGTGCTAGGACTTCGACTGACGTTGTTGCCTATAAGAAT
GTCAATGACCTACCACCACCCAGAGAGATGATTATTCAGGTTGACCAAAAGAATGAGGCC
ATCCTTTTACCAATATATGGTAATATGGTTCCTTTCCATGTGGCTACTGTTAAGACTGTT
TCAAGCCAACAGGACTACATCCGAATCATATTTAATGTTCCTGGTACCCCTTTCTCACCT
ACTGATGTGAAGAATCAAGGTGCCATCTACCTAAAAGAAGTTTCATTTCGTTCCAAGGAT
CATAGGCACATAAGTGAAATGGTCCAGGTGATTAAAACACTTAGACGTAATTATATGTCA
AGGGAGTCTGAGAGAGCCGAAAGAGCAACTTTAGTGACTCAGGAAAAACTTGTCCTTGCA
GGGAATAAATTCAAGCCAGTTAGGCTGCCTGACTTATGGATCCGTCCCACATTTGGTGGT
CGTGCACGAAAGCTTGCTGGTACACTGGAAGCTCATGCCAATGGTTTCCGGTATTCAACC
ACAAGACAAGATGAACGTGTTGACATCTTGTATGGTAATATCAAGCATGTGTTCTTCCAG
CCAGCAGAGAAGGAGATGGTTACCCTTCTTCACTTTCATCTGCACAACCACATAATGGTG
GGGAAAAAAAAGACAAAGGATGTTCAGTTCTATGTTGAGGTAATGGATGTGGTCCAAACG
CTTGGAGGTGGAAAGAGGTCTGCATATGATCCAGATGAGATTGAGGAAGAACAGAGGGAA
AGAGATCGAAAGAACAAAATCAACATGGACTTCCAGAGTTTTGTGAACAGGGTGAATGAT
ATTTGGAGCCAGCCTCAGTTCAAGGGATTCGACCTGGAGTTTGATCAACCTCTGAGAGAA
CTTGGGTTCCATGGTGTTCCCTATAAATCATCAGCTTTCATTGTACCAACCTCCAGCTGT
TTGGTTGAGCTGGTAGAGACGCCATTCCTTGTGATAACCCTAAGTGAGATTGAGATTGTT
AACTTGGAGAGAGTTGGATTTGGGCAGAAGAACTGTGATATGGCTATTGTTTTCAAGGAC
TTCAAGCGCGATGTCATGCGGATAGATTCAATCCCTATTTCATCCCTTGATGGCATCAAG
GAATGGCTTGACACAACTGACATCAAGTATTATGAGAGCAAGGTGAATCTGAATTGGCGT
CAAGTACTGAAGACCATAACTGATGAACCACAGAAATTCATTGATGAAGGTGGTTGGGAA
TTCTTAAACTTGGAAGGTACTGATTCATCATCTGGAGATTCAGAGTCGGACCAAGGTTAT
GAACCTTCGGATGCTGAACCTGAGTCTGACTCTGATGATGAAGAGTCTGATAGTGAATCT
CTGGTTGACTCTGAAGATGATGAAGAAGAGGATGACAATGAAGATTCAGAGGAAGAAAAA
GGTAAAACATGGGAAGAGCTGGAGAAAGAAGCAAGCTATGCCGACAGGGAGATTAATGAA
TCAGATAGTGAGGATGAGAAGAGGAAAAAGAAGAACTTTGGCAAGTCACGAGCTGCTCCT
AGTTCTGCTGCCAGCAAGCGAATGAAGTTCAGGTAG