Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046984
CDS Infomation

pacid=37437038 polypeptide=PGSC0003DMP400031790 locus=PGSC0003DMG400018248 ID=PGSC0003DMT400046984.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTAGTCTAAACGATGAGTTATCCAAAAAAACTGCTGTTTTTGGTCTCAAGGTC
TGGCAATTGATCGGAATTTTTGTTGGGATTTTTATTGTGGCAATCCTCTTACTGTTGACA
TTGTATCTCACTTTACGGAGGAAGTCGAGAAGAGGTACAGACAATCTCCCTGTTAGCCAA
ATACCAACAGTTTCTAAAGAAATTAAAGAAGTTCGGGTTGAGCAAGTATCAACAAATGAT
TTTTCTCCACGAGACGGAATTCTTCTCACCATTCATGACAAAACCAGTGATAAAGAATCA
GATAAGGTTCTGGTTCATCTTGGAATGGGGAAAAAGAATGGAGATAACAGCAGTCAATCA
GGTTCCTTCCATCATGTTGACAAGGACTGTTGTGGATCACAATCAGGAGAAGAAGGGAGT
TCATGCAAAAGTGCAATGTATAAAGCTTATAATTCACATCCAATAACTGCTCCTTCTCCT
CTAACCGGATTACCTGAGTTTTCTCACTTGGGTTGGGGCCACTGGTTTACATTGAGAGAT
CTTGAGCTTGCAACAGGTCGGTTTTCAAAGGAGAATATTCTCGGTGAGGGTGGATATGGC
ATTGTCTACCGGGGGAATTTGATTAATGGAACACCTGTAGCTATTAAGAAGCTCCTCAAC
AATCTAGGCCAAGCAGAGAAAGAGTTCCAAGTGGAGGTTGAAGCCATTGGCCATGTGCGT
CACAAAAATTTGGTCCGCCTTCTAGGATACTGCATTGAAGGAACTCACAGGATGCTGGTT
TACGAATATGTCAACAATGGCAATTTGGAACAGTGGCTTCATGGAGCCATGCGACACCAC
GGGTATCTAACTTGGGAGGCTAGGATGAAGGTTCTCCTTGGGACAGCTAAAGCTCTTGCC
TATTTGCATGAGAATATTGAGCCCAAAGTTGTTCATCGAGATATAAAATCAAGTAATATA
TTGATTGATGATGACTTCAATGCGAAGGTCTCTGATTTTGGTCTGGCCAAACTGCTTGGT
GCTGGTAAAAGTCATATCACAACTCGAGTCATGGGTACCTTTGGGTATGTGGCTCCTGAA
TATGCAAATACTGGTCTCTTGAATGAAAAGAGTGATGTTTATAGCTTTGGGGTAGTGTTG
TTAGAATCGATCACAGGAAGAGATCCTGTGGACTATGGCCGTCCTGCCCAAGAGGTGAAT
CTTGTTGATTGGTTGAAAATGATGGTTGGAAGCAGGCGCTCTGAGGAAGTAGTAGATCCA
AATATTGAAACAAGGCCACCAACAAGAGCTCTCAAAAGAGCCCTTCTGACTGCTCTGAGA
TGTGTTGATCCAGATTCTGACAAGAGACCAAAGATGAGCCAAGTTGTTCGTATGCTTGAA
TCAGAGGAATATCCCATACCAAGAGAGGATCGAAGGCAACGAAGATCTCAAGCAGGTAAC
GGGGAGAGTGATTCTCAAAACTACGACACTGACAAGAGTGACAACCCAGATCCAAGGTCG
GAAAGTAGAAGGAACCATCAAGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400031790
PEP Infomation

pacid=37437038 transcript=PGSC0003DMT400046984 locus=PGSC0003DMG400018248 ID=PGSC0003DMT400046984.v4.03 annot-version=v4.03
Sequence

MAGSLNDELSKKTAVFGLKVWQLIGIFVGIFIVAILLLLTLYLTLRRKSRRGTDNLPVSQ
IPTVSKEIKEVRVEQVSTNDFSPRDGILLTIHDKTSDKESDKVLVHLGMGKKNGDNSSQS
GSFHHVDKDCCGSQSGEEGSSCKSAMYKAYNSHPITAPSPLTGLPEFSHLGWGHWFTLRD
LELATGRFSKENILGEGGYGIVYRGNLINGTPVAIKKLLNNLGQAEKEFQVEVEAIGHVR
HKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARMKVLLGTAKALA
YLHENIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHITTRVMGTFGYVAPE
YANTGLLNEKSDVYSFGVVLLESITGRDPVDYGRPAQEVNLVDWLKMMVGSRRSEEVVDP
NIETRPPTRALKRALLTALRCVDPDSDKRPKMSQVVRMLESEEYPIPREDRRQRRSQAGN
GESDSQNYDTDKSDNPDPRSESRRNHQV*

Transcript Sequence

Transcript ID

PGSC0003DMT400046984
Transcript Infomation

pacid=37437038 locus=PGSC0003DMG400018248 ID=PGSC0003DMT400046984.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTAGTCTAAACGATGAGTTATCCAAAAAAACTGCTGTTTTTGGTCTCAAGGTC
TGGCAATTGATCGGAATTTTTGTTGGGATTTTTATTGTGGCAATCCTCTTACTGTTGACA
TTGTATCTCACTTTACGGAGGAAGTCGAGAAGAGGTACAGACAATCTCCCTGTTAGCCAA
ATACCAACAGTTTCTAAAGAAATTAAAGAAGTTCGGGTTGAGCAAGTATCAACAAATGAT
TTTTCTCCACGAGACGGAATTCTTCTCACCATTCATGACAAAACCAGTGATAAAGAATCA
GATAAGGTTCTGGTTCATCTTGGAATGGGGAAAAAGAATGGAGATAACAGCAGTCAATCA
GGTTCCTTCCATCATGTTGACAAGGACTGTTGTGGATCACAATCAGGAGAAGAAGGGAGT
TCATGCAAAAGTGCAATGTATAAAGCTTATAATTCACATCCAATAACTGCTCCTTCTCCT
CTAACCGGATTACCTGAGTTTTCTCACTTGGGTTGGGGCCACTGGTTTACATTGAGAGAT
CTTGAGCTTGCAACAGGTCGGTTTTCAAAGGAGAATATTCTCGGTGAGGGTGGATATGGC
ATTGTCTACCGGGGGAATTTGATTAATGGAACACCTGTAGCTATTAAGAAGCTCCTCAAC
AATCTAGGCCAAGCAGAGAAAGAGTTCCAAGTGGAGGTTGAAGCCATTGGCCATGTGCGT
CACAAAAATTTGGTCCGCCTTCTAGGATACTGCATTGAAGGAACTCACAGGATGCTGGTT
TACGAATATGTCAACAATGGCAATTTGGAACAGTGGCTTCATGGAGCCATGCGACACCAC
GGGTATCTAACTTGGGAGGCTAGGATGAAGGTTCTCCTTGGGACAGCTAAAGCTCTTGCC
TATTTGCATGAGAATATTGAGCCCAAAGTTGTTCATCGAGATATAAAATCAAGTAATATA
TTGATTGATGATGACTTCAATGCGAAGGTCTCTGATTTTGGTCTGGCCAAACTGCTTGGT
GCTGGTAAAAGTCATATCACAACTCGAGTCATGGGTACCTTTGGGTATGTGGCTCCTGAA
TATGCAAATACTGGTCTCTTGAATGAAAAGAGTGATGTTTATAGCTTTGGGGTAGTGTTG
TTAGAATCGATCACAGGAAGAGATCCTGTGGACTATGGCCGTCCTGCCCAAGAGGTGAAT
CTTGTTGATTGGTTGAAAATGATGGTTGGAAGCAGGCGCTCTGAGGAAGTAGTAGATCCA
AATATTGAAACAAGGCCACCAACAAGAGCTCTCAAAAGAGCCCTTCTGACTGCTCTGAGA
TGTGTTGATCCAGATTCTGACAAGAGACCAAAGATGAGCCAAGTTGTTCGTATGCTTGAA
TCAGAGGAATATCCCATACCAAGAGAGGATCGAAGGCAACGAAGATCTCAAGCAGGTAAC
GGGGAGAGTGATTCTCAAAACTACGACACTGACAAGAGTGACAACCCAGATCCAAGGTCG
GAAAGTAGAAGGAACCATCAAGTATAA