Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046948
CDS Infomation

pacid=37437748 polypeptide=PGSC0003DMP400031766 locus=PGSC0003DMG400018234 ID=PGSC0003DMT400046948.v4.03 annot-version=v4.03
Sequence

ATGGAGCTGAAACTATCCTTCCCTGCGGATTCTCCGCCTTTGGCTGTCATTGCGGCGGCG
AAGATCGCCGGAGTTCCAATCTCTACTGATCCAACTCTTACTCCTGGTTCTACTCCTATT
ATACATCTAGATAATGGACTGAAGCTGTGGGGAAATTTTGTGCTTCTGAGGCACATTAGT
CGGGTTGCTAACATACCCGATCTGTACCAGCGGGACGCCATTGAGTCTAGCCAGATAGAC
GAATGGCTAGAGTATGCTCCTATATTTGCTTCTGGCTCTCAATTTGAGGAAGCATGTGGC
TACGTGGATGGATATCTTCTGCAGCACACATTTCTTGTTGGACATAGCCTCTCAATTGCA
GATATTGCAGTTTGGTCTGGCCTTGCAGGTACTGGGAAGAGATGGGAAAGCCTACGATCA
TCTAAGAAGTACCAAAATCTGGCAAGGTGGTTCAACTCAATATTAGCTGAATATGGTGTT
CTAAATGAAGTCACAGCAACATATGTGGGAAAGAAAGGCTCGGTAAAACCAACTGCATCC
AAAGTGAAAGAGCAACAAGGCTCAAATGCTAATCTGGCCAAAGTAAATGGTGATGCCGCT
GACAAGGAAAAAGAAAGTAGGAAACCGACATCTGAGGTAGATCTTCCTGAGGCAGAAGTT
GGAAAAGTGCGGTTGAGGTTTGCACCAGAACCCAGTGGTTATCTCCATATTGGTCACTCA
AAAGCAGCATTACTGAACCAGTATTTTGCTGAAAGATACCAAGGGGAAGTTATTATTCGT
TTTGATGACACAAATCCTGATAAGGAAAGCAATGAATTTGTGGATAATCTACTGAAAGAT
ATTGAAACTCTTGGAATTAAGTATAGGACTGTGACATATACATCTGATTACTTTCCACAA
TTAATGGAGATGGCAGAGAAATTGATTCGTGAGGGTAAAGCCTATGTGGATGATACCCCA
AGGGAGCAAATGCAAAAAGAAAGAATGGATGGAATAGAATCTAGGTGTAGGAACAATAGT
GTGGAGGAGAATTTGAAATTATGGAAAGAGATGATTGCTGGTTCAGAGAGGGGAACAATG
TGTTGTGTTAGAGGGAAATTGGATATGCAGGATCCTAACAAGTCAGTTAGGGACCCAGTA
TATTACCGTTGCAATCAGACTCCTCACCATAGGATTGGTGCTAAATATAAAGTATACCCT
ACTTATGACTTTGCATGCCCATTTGTAGATGCATTTGAGGGTATTACACATGCACTTCGA
TCTAGTGAATATCATGATAGGAATGATCAGTATTATTGGATTCAAACTGATATGGGTTTC
AGAAAAGTTCATATTTATGAATTTAGTCGGCTGAATTTGGTCTATACACTTCTTAGCAAG
CGTAAGTTGCTGTGGTTTGTGCAAAATGGACTGGTCGAAGGGTGGGATGATCCTCGTTTT
CCGACCGTACAAGGGATTGTGCGCAGAGGGCTGAAGATTGAGGCGCTGATACAGTTCATT
CTTGAACAAGGAGCATCAAAGAATCTCAATCTAATGGAGTGGGACAAGCTATGGGCCACT
AATAAGAAGATCATTGATCCTGTATGTCCTAGGCATACCGCTGTTATTGAAGAAAGACGA
GTCTTGTTGACTTTGAGTAATGGACCAGATGATCCTTTTGTACGTATTGTACCCAAGCAT
AAAAAATATGCAGGTGCTGGGGAAAAAGCAACAACTTACACCAAGAGAATCTGGATAGAC
TATGATGATGCTGTATCAATCTCTGTCAATGAGGAAGTAACATTGATGGACTGGGGCAAT
GCAATAGTGAAAGAGATACAGAAGGACCAAGAGGGTAATGTTACTCATCTGTCTGGGATT
CTGCATCTTGAAGGGTCAGTTAAAACAACAAAGTTAAAGCTGACTTGGCTGCCAGAGAGT
GATGAACTTGTTAAACTCTCTGTGGTTGATTTTGACTATTTAATTACAAAAAAGAAGCTC
GAGGAAGATGAGAACTTCGTCGATGTTGTTAATCCTTGCACAAGGAAGGAGACTCCAGCA
CTTGGTGATTCTAACATGAGAAATCTGCAACGTGGAGACGTGTTGCAGCTGGAGAGGAAG
GGCTACTTCAGATGTGATGTTCCCTTCTTAAGACCTCAAAAACCCATTGTTCTTTTTGCC
ATCCCTGATGGTAAACAGCAACCCGTGTTGCGGTTTGCAGTCCCAGATGGCAAAACAAAA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400031766
PEP Infomation

pacid=37437748 transcript=PGSC0003DMT400046948 locus=PGSC0003DMG400018234 ID=PGSC0003DMT400046948.v4.03 annot-version=v4.03
Sequence

MELKLSFPADSPPLAVIAAAKIAGVPISTDPTLTPGSTPIIHLDNGLKLWGNFVLLRHIS
RVANIPDLYQRDAIESSQIDEWLEYAPIFASGSQFEEACGYVDGYLLQHTFLVGHSLSIA
DIAVWSGLAGTGKRWESLRSSKKYQNLARWFNSILAEYGVLNEVTATYVGKKGSVKPTAS
KVKEQQGSNANLAKVNGDAADKEKESRKPTSEVDLPEAEVGKVRLRFAPEPSGYLHIGHS
KAALLNQYFAERYQGEVIIRFDDTNPDKESNEFVDNLLKDIETLGIKYRTVTYTSDYFPQ
LMEMAEKLIREGKAYVDDTPREQMQKERMDGIESRCRNNSVEENLKLWKEMIAGSERGTM
CCVRGKLDMQDPNKSVRDPVYYRCNQTPHHRIGAKYKVYPTYDFACPFVDAFEGITHALR
SSEYHDRNDQYYWIQTDMGFRKVHIYEFSRLNLVYTLLSKRKLLWFVQNGLVEGWDDPRF
PTVQGIVRRGLKIEALIQFILEQGASKNLNLMEWDKLWATNKKIIDPVCPRHTAVIEERR
VLLTLSNGPDDPFVRIVPKHKKYAGAGEKATTYTKRIWIDYDDAVSISVNEEVTLMDWGN
AIVKEIQKDQEGNVTHLSGILHLEGSVKTTKLKLTWLPESDELVKLSVVDFDYLITKKKL
EEDENFVDVVNPCTRKETPALGDSNMRNLQRGDVLQLERKGYFRCDVPFLRPQKPIVLFA
IPDGKQQPVLRFAVPDGKTK*

Transcript Sequence

Transcript ID

PGSC0003DMT400046948
Transcript Infomation

pacid=37437748 locus=PGSC0003DMG400018234 ID=PGSC0003DMT400046948.v4.03 annot-version=v4.03
Sequence

ATGGAGCTGAAACTATCCTTCCCTGCGGATTCTCCGCCTTTGGCTGTCATTGCGGCGGCG
AAGATCGCCGGAGTTCCAATCTCTACTGATCCAACTCTTACTCCTGGTTCTACTCCTATT
ATACATCTAGATAATGGACTGAAGCTGTGGGGAAATTTTGTGCTTCTGAGGCACATTAGT
CGGGTTGCTAACATACCCGATCTGTACCAGCGGGACGCCATTGAGTCTAGCCAGATAGAC
GAATGGCTAGAGTATGCTCCTATATTTGCTTCTGGCTCTCAATTTGAGGAAGCATGTGGC
TACGTGGATGGATATCTTCTGCAGCACACATTTCTTGTTGGACATAGCCTCTCAATTGCA
GATATTGCAGTTTGGTCTGGCCTTGCAGGTACTGGGAAGAGATGGGAAAGCCTACGATCA
TCTAAGAAGTACCAAAATCTGGCAAGGTGGTTCAACTCAATATTAGCTGAATATGGTGTT
CTAAATGAAGTCACAGCAACATATGTGGGAAAGAAAGGCTCGGTAAAACCAACTGCATCC
AAAGTGAAAGAGCAACAAGGCTCAAATGCTAATCTGGCCAAAGTAAATGGTGATGCCGCT
GACAAGGAAAAAGAAAGTAGGAAACCGACATCTGAGGTAGATCTTCCTGAGGCAGAAGTT
GGAAAAGTGCGGTTGAGGTTTGCACCAGAACCCAGTGGTTATCTCCATATTGGTCACTCA
AAAGCAGCATTACTGAACCAGTATTTTGCTGAAAGATACCAAGGGGAAGTTATTATTCGT
TTTGATGACACAAATCCTGATAAGGAAAGCAATGAATTTGTGGATAATCTACTGAAAGAT
ATTGAAACTCTTGGAATTAAGTATAGGACTGTGACATATACATCTGATTACTTTCCACAA
TTAATGGAGATGGCAGAGAAATTGATTCGTGAGGGTAAAGCCTATGTGGATGATACCCCA
AGGGAGCAAATGCAAAAAGAAAGAATGGATGGAATAGAATCTAGGTGTAGGAACAATAGT
GTGGAGGAGAATTTGAAATTATGGAAAGAGATGATTGCTGGTTCAGAGAGGGGAACAATG
TGTTGTGTTAGAGGGAAATTGGATATGCAGGATCCTAACAAGTCAGTTAGGGACCCAGTA
TATTACCGTTGCAATCAGACTCCTCACCATAGGATTGGTGCTAAATATAAAGTATACCCT
ACTTATGACTTTGCATGCCCATTTGTAGATGCATTTGAGGGTATTACACATGCACTTCGA
TCTAGTGAATATCATGATAGGAATGATCAGTATTATTGGATTCAAACTGATATGGGTTTC
AGAAAAGTTCATATTTATGAATTTAGTCGGCTGAATTTGGTCTATACACTTCTTAGCAAG
CGTAAGTTGCTGTGGTTTGTGCAAAATGGACTGGTCGAAGGGTGGGATGATCCTCGTTTT
CCGACCGTACAAGGGATTGTGCGCAGAGGGCTGAAGATTGAGGCGCTGATACAGTTCATT
CTTGAACAAGGAGCATCAAAGAATCTCAATCTAATGGAGTGGGACAAGCTATGGGCCACT
AATAAGAAGATCATTGATCCTGTATGTCCTAGGCATACCGCTGTTATTGAAGAAAGACGA
GTCTTGTTGACTTTGAGTAATGGACCAGATGATCCTTTTGTACGTATTGTACCCAAGCAT
AAAAAATATGCAGGTGCTGGGGAAAAAGCAACAACTTACACCAAGAGAATCTGGATAGAC
TATGATGATGCTGTATCAATCTCTGTCAATGAGGAAGTAACATTGATGGACTGGGGCAAT
GCAATAGTGAAAGAGATACAGAAGGACCAAGAGGGTAATGTTACTCATCTGTCTGGGATT
CTGCATCTTGAAGGGTCAGTTAAAACAACAAAGTTAAAGCTGACTTGGCTGCCAGAGAGT
GATGAACTTGTTAAACTCTCTGTGGTTGATTTTGACTATTTAATTACAAAAAAGAAGCTC
GAGGAAGATGAGAACTTCGTCGATGTTGTTAATCCTTGCACAAGGAAGGAGACTCCAGCA
CTTGGTGATTCTAACATGAGAAATCTGCAACGTGGAGACGTGTTGCAGCTGGAGAGGAAG
GGCTACTTCAGATGTGATGTTCCCTTCTTAAGACCTCAAAAACCCATTGTTCTTTTTGCC
ATCCCTGATGGTAAACAGCAACCCGTGTTGCGGTTTGCAGTCCCAGATGGCAAAACAAAA
TGA