Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046925
CDS Infomation

pacid=37435427 polypeptide=PGSC0003DMP400031747 locus=PGSC0003DMG401018223 ID=PGSC0003DMT400046925.v4.03 annot-version=v4.03
Sequence

ATGGGTGAACTCTCAAGCCAAGAACCTCTTCTTTTGAAAAAAGATGATGAATTTGATTAT
CTCAATAAGACGCCACTTTTGGTATCATCAACAAAGTTGATTCTCAAAGTAGTAATGTGG
GTGGCTTTTATTACATGGGCTGCTTTTATTTTCTTGTTGCCTACAAAATTCACTAATGAA
CTTTTTGGGACAATTGTTACAGCTACCAAAGGATCTATTTTTGGGACAGCAGGCAGCACA
TCCTTGATATTCAGTTTCCCAATTATCTTGATTGCATTTCTTGCAATTATTCGTCTCGTT
GTCGCGGGTGAAGATCAACCTCAAATCAAGAAGGCTGGAAAAGGTCCAAATTTTAGATTA
TGGACATTCCCTGTGCTGGTGGATGGACCATTTGGGGTTGTTACAGCTGCGGAAATGATT
GGCGTTATAATCTTCTCAGTGTACATCGTCTGGGCTGTAGTTATGTATAGTATACAGAAT
GTTGACCTCTTATCTTCGTATCATTTACCAGACATGAAAGAGAGAAGTGGTAAGTTGCTG
GAGCTGACAGGTCTCCGTTTTGGATTCATTGGATTAATCTGCTTAGCGTTTTTGTTTCTG
CCTGTTGCACGTGGTTCAGTTCTTCTTCGAGCTATAGATATCCCTTTTGAACATGCCACT
AGATATCATGTTTGGCTGGGACATCTTACTATGGCTATTTTTAGCCTTCATGGTCTATTC
TATATTATTGGCTGGGCAATTCAAGGGAGACTTTTGGAAGAACTAGTCGGCTGGAAAAAC
ATAGGAATAGCCAATCTTCCAGGAGTTATCAGCCTTTTAGCTGGTTTGTTGATGTGGGTG
ACTTCACTTCCCGGAGTAAGGAGAAATAACTTTGAGCTGTTCTTCTATACACACCAATTG
TATGTGGTGTTTGTGGTGTTCCTGGCTTTGCATGTTGGTGATTTCGTCTTCATGATGGCT
GGAGCTGGGATCTTCCTGTTCATGCTTGATCGGTTCCTTAGATTCTTCCAGTCACGAAAG
ACAGTTGACATACTTTCAGCCACATGCTTTCCTTGTGGAACCGTTGAACTCGTTATTTCA
AAACCTGCAAATTTACATTACAACGCCCTTGGCTGGATATTCTTACAAATACGTGAGTTG
TCCTGGCTGCAGTGGCACCCTTTCAGTGTCTCTTCTAGTCCCCTTGATGGCAAACATCAT
CTTGCGATTCTTATAAAGGTTCTTGGAGATTGGACTGAAAAACTGAAGGGGAACATCTTG
AATCTTTCTGTAGAACAATCTGAGACGGAGCCTCTTTTGCAGCATAACAGGAAAATGACA
GCTTCTGTTGAAGGTCCTTATGGACATGAGTCACCATACCACTTAACGTATGAAAATCTC
ATTTTGGTAGCAGGTGGAATTGGAATTTCCCCCTTTCTAGCTATCCTGAGTGATATCCTC
CACTGTATCAACGATAGTTCGCCTTGCCTGCCAAGAAATATATTAATAGTATGGGCTATC
AAAAATTCAGATGAGCTTCCACTTCTTGAGACAGTTGACATGGAAGCAATCTGTCCACTT
TTCTCTGATAAACTGAATCTTGAGATTCAAACATATGTGACGCGGGAATCACAGCCTTCA
TTGGAGGAGGGTAAAACACCCAAAGCAATGCACCACTCCTCAATCTCCCCTGGCTTCAAC
GGATGTCGAATGTCTGGTTTGGTTGGTACTGGACATGTCGTATGGTCTGGATTATATGTC
ATAGTATCCACCATAGGGTTTGTGATCACTGTAGCATTGCTGGACATTTTCTACATAAAT
CCATTCAATATAACTTACTGGTGGTACAAGGGGCTTTTGTTGATTGGATGCATGACTGCA
AGTATTCTTATATTTGGGGGTCTCGTTATCGCTTTATGGCATCTTTGGGAAAGGAAAACT
TCATCGAAGGAGGAACCACAGGACGCCACAAAGAAAGTTGACATCTTGCAGCAGAATGAA
GCCTCTTTACACAGGAACTTTGGAGAGGCTCGATATGTTAATAATATTCGATATGGTCAA
AGACCAGATTTCCAAGAGATATTTGGATCACATGCAAAGAGTTGGGGAAGTGTAGATATT
GGTGTGATTGTGTGTGGTCCTCCTACTCTTCAGTCCAGTGTTGCTAAAGAGTGCAGAAGC
CAGAACTTGAAGAGAAGAGGCCATCAGGCTATTTTCCATTTCAACAGCCACAGTTTTGAC
CTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400031747
PEP Infomation

pacid=37435427 transcript=PGSC0003DMT400046925 locus=PGSC0003DMG401018223 ID=PGSC0003DMT400046925.v4.03 annot-version=v4.03
Sequence

MGELSSQEPLLLKKDDEFDYLNKTPLLVSSTKLILKVVMWVAFITWAAFIFLLPTKFTNE
LFGTIVTATKGSIFGTAGSTSLIFSFPIILIAFLAIIRLVVAGEDQPQIKKAGKGPNFRL
WTFPVLVDGPFGVVTAAEMIGVIIFSVYIVWAVVMYSIQNVDLLSSYHLPDMKERSGKLL
ELTGLRFGFIGLICLAFLFLPVARGSVLLRAIDIPFEHATRYHVWLGHLTMAIFSLHGLF
YIIGWAIQGRLLEELVGWKNIGIANLPGVISLLAGLLMWVTSLPGVRRNNFELFFYTHQL
YVVFVVFLALHVGDFVFMMAGAGIFLFMLDRFLRFFQSRKTVDILSATCFPCGTVELVIS
KPANLHYNALGWIFLQIRELSWLQWHPFSVSSSPLDGKHHLAILIKVLGDWTEKLKGNIL
NLSVEQSETEPLLQHNRKMTASVEGPYGHESPYHLTYENLILVAGGIGISPFLAILSDIL
HCINDSSPCLPRNILIVWAIKNSDELPLLETVDMEAICPLFSDKLNLEIQTYVTRESQPS
LEEGKTPKAMHHSSISPGFNGCRMSGLVGTGHVVWSGLYVIVSTIGFVITVALLDIFYIN
PFNITYWWYKGLLLIGCMTASILIFGGLVIALWHLWERKTSSKEEPQDATKKVDILQQNE
ASLHRNFGEARYVNNIRYGQRPDFQEIFGSHAKSWGSVDIGVIVCGPPTLQSSVAKECRS
QNLKRRGHQAIFHFNSHSFDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400046925
Transcript Infomation

pacid=37435427 locus=PGSC0003DMG401018223 ID=PGSC0003DMT400046925.v4.03 annot-version=v4.03
Sequence

ATGGGTGAACTCTCAAGCCAAGAACCTCTTCTTTTGAAAAAAGATGATGAATTTGATTAT
CTCAATAAGACGCCACTTTTGGTATCATCAACAAAGTTGATTCTCAAAGTAGTAATGTGG
GTGGCTTTTATTACATGGGCTGCTTTTATTTTCTTGTTGCCTACAAAATTCACTAATGAA
CTTTTTGGGACAATTGTTACAGCTACCAAAGGATCTATTTTTGGGACAGCAGGCAGCACA
TCCTTGATATTCAGTTTCCCAATTATCTTGATTGCATTTCTTGCAATTATTCGTCTCGTT
GTCGCGGGTGAAGATCAACCTCAAATCAAGAAGGCTGGAAAAGGTCCAAATTTTAGATTA
TGGACATTCCCTGTGCTGGTGGATGGACCATTTGGGGTTGTTACAGCTGCGGAAATGATT
GGCGTTATAATCTTCTCAGTGTACATCGTCTGGGCTGTAGTTATGTATAGTATACAGAAT
GTTGACCTCTTATCTTCGTATCATTTACCAGACATGAAAGAGAGAAGTGGTAAGTTGCTG
GAGCTGACAGGTCTCCGTTTTGGATTCATTGGATTAATCTGCTTAGCGTTTTTGTTTCTG
CCTGTTGCACGTGGTTCAGTTCTTCTTCGAGCTATAGATATCCCTTTTGAACATGCCACT
AGATATCATGTTTGGCTGGGACATCTTACTATGGCTATTTTTAGCCTTCATGGTCTATTC
TATATTATTGGCTGGGCAATTCAAGGGAGACTTTTGGAAGAACTAGTCGGCTGGAAAAAC
ATAGGAATAGCCAATCTTCCAGGAGTTATCAGCCTTTTAGCTGGTTTGTTGATGTGGGTG
ACTTCACTTCCCGGAGTAAGGAGAAATAACTTTGAGCTGTTCTTCTATACACACCAATTG
TATGTGGTGTTTGTGGTGTTCCTGGCTTTGCATGTTGGTGATTTCGTCTTCATGATGGCT
GGAGCTGGGATCTTCCTGTTCATGCTTGATCGGTTCCTTAGATTCTTCCAGTCACGAAAG
ACAGTTGACATACTTTCAGCCACATGCTTTCCTTGTGGAACCGTTGAACTCGTTATTTCA
AAACCTGCAAATTTACATTACAACGCCCTTGGCTGGATATTCTTACAAATACGTGAGTTG
TCCTGGCTGCAGTGGCACCCTTTCAGTGTCTCTTCTAGTCCCCTTGATGGCAAACATCAT
CTTGCGATTCTTATAAAGGTTCTTGGAGATTGGACTGAAAAACTGAAGGGGAACATCTTG
AATCTTTCTGTAGAACAATCTGAGACGGAGCCTCTTTTGCAGCATAACAGGAAAATGACA
GCTTCTGTTGAAGGTCCTTATGGACATGAGTCACCATACCACTTAACGTATGAAAATCTC
ATTTTGGTAGCAGGTGGAATTGGAATTTCCCCCTTTCTAGCTATCCTGAGTGATATCCTC
CACTGTATCAACGATAGTTCGCCTTGCCTGCCAAGAAATATATTAATAGTATGGGCTATC
AAAAATTCAGATGAGCTTCCACTTCTTGAGACAGTTGACATGGAAGCAATCTGTCCACTT
TTCTCTGATAAACTGAATCTTGAGATTCAAACATATGTGACGCGGGAATCACAGCCTTCA
TTGGAGGAGGGTAAAACACCCAAAGCAATGCACCACTCCTCAATCTCCCCTGGCTTCAAC
GGATGTCGAATGTCTGGTTTGGTTGGTACTGGACATGTCGTATGGTCTGGATTATATGTC
ATAGTATCCACCATAGGGTTTGTGATCACTGTAGCATTGCTGGACATTTTCTACATAAAT
CCATTCAATATAACTTACTGGTGGTACAAGGGGCTTTTGTTGATTGGATGCATGACTGCA
AGTATTCTTATATTTGGGGGTCTCGTTATCGCTTTATGGCATCTTTGGGAAAGGAAAACT
TCATCGAAGGAGGAACCACAGGACGCCACAAAGAAAGTTGACATCTTGCAGCAGAATGAA
GCCTCTTTACACAGGAACTTTGGAGAGGCTCGATATGTTAATAATATTCGATATGGTCAA
AGACCAGATTTCCAAGAGATATTTGGATCACATGCAAAGAGTTGGGGAAGTGTAGATATT
GGTGTGATTGTGTGTGGTCCTCCTACTCTTCAGTCCAGTGTTGCTAAAGAGTGCAGAAGC
CAGAACTTGAAGAGAAGAGGCCATCAGGCTATTTTCCATTTCAACAGCCACAGTTTTGAC
CTCTAG