Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046923
CDS Infomation

pacid=37439967 polypeptide=PGSC0003DMP400031745 locus=PGSC0003DMG400018222 ID=PGSC0003DMT400046923.v4.03 annot-version=v4.03
Sequence

ATGCAGCACCGGCAAGAGATCGATCGCCACCGCAGCGTGGTGGTGGAGCTACCACTCGGA
GACGGAGACGGAGACGGAGGCTGCGCCACATTCGATTTGGAAAAAGCAGTATGTAGCCAC
GGCCTATTTATGATGGCCCCAAACCGCTGGGACTCTCTCTCCAAAACCCTAGAACGCCCA
CTACACCTCTCCGAAAACATCAACGATGATGATCACGAACAATCAGTTCTCGTCCAAATT
AATCAACCCTCGGATTCTCCTCATTCACTCCTTCTTCGAGTTTTCGGTACTGCTTCCCTT
TCTACTATACACCAACGCTCTCTGCTGGGTCAAGTGAGGCGAATGGTGAGATTATCAGTG
GAAGAGAATAAAAGAGTGAAACAGTTTCAGGAGATTTGTGGAGAAGCAAAGGACAGGGGA
CTTGGGAGAGTGTTTAGATCGCCGACATTGTTTGAGGACATGGTGAAGTGTATGCTGCTC
TGCAATTGCCAGTGGTCAAGGACGTTGAGCATGGCTGAAGCATTATGTGAGCTTCAGTTG
GAGCTGAACTGTCCCTCGTCAGCTGCATCTTTTCCTGATCCTGATAATCAAAATCAGTTG
AAGGGCGTAACTTTCAAGTCTGAGCATTTCACTCCAAGAACACCAGCAGGAAAAGAATCA
CGGAAAAGAGCTGGAGCTTATGGATGTTCCAGAAAATTGTTGGAGAGGCTTACCGAAGTC
GAAGAAATCATAGATATAGGGAAACCGGGTGTAACTGTGACACCTGCATTTTCAGTTGGT
GAAGAGGTTCTCAAAAAAAGTAATCTTTGTCGAGATACTACTGAGGTTTGCGATGTTGGT
ACAAGTGCACCATTCAATCTTGATCCTTCAGAAGATAGAAAGCTGAGCTCTTTTAATCAG
CTTGGGAACTTCCCTAGCCCGAAAGAATTGGCAAGCCTTGATGAAAGTTTTCTAGCAAAG
CGTTGTGGTCTTGGTTATAGAGCTGGCCGCATTATAAAGCTTGCTAAGGGCATAGTTGAA
GGCAGTATTCAGTTGAAAGAACTTGAAGAAGCTTGTAGCAACCCAAGCTTGTCCGATTAT
GATAAAATGGCTGAGCAGCTGAGAGAAATAGATGGATTTGGCCCATTTACTTGTGCTAAT
GTACTGATGTGCTTGGGTTATTATCATGTGATTCCTACTGATTCAGAAACAATTAGGCAT
CTAAAGCAGGTTCATGCAAGAACCTCCACCATACAGAACGTTCAAAGAGATGTTGAAAAT
ATTTATGGGAAGTATGCACCGTTTCAGTTCTTAGCATATTGGTCGGAGGTGTGGCACTTT
TATGAGGAACGGTTTGGTAAGCTTAGCGAGATGCCCCACTCAGAATATAAACTTATTACT
GCCGCAAATATGAGACGGAAAAGAAATGGCAAATGCAAGAAGTTGAAGATAACCTCAGCA
GAAAAGCTTGGCGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031745
PEP Infomation

pacid=37439967 transcript=PGSC0003DMT400046923 locus=PGSC0003DMG400018222 ID=PGSC0003DMT400046923.v4.03 annot-version=v4.03
Sequence

MQHRQEIDRHRSVVVELPLGDGDGDGGCATFDLEKAVCSHGLFMMAPNRWDSLSKTLERP
LHLSENINDDDHEQSVLVQINQPSDSPHSLLLRVFGTASLSTIHQRSLLGQVRRMVRLSV
EENKRVKQFQEICGEAKDRGLGRVFRSPTLFEDMVKCMLLCNCQWSRTLSMAEALCELQL
ELNCPSSAASFPDPDNQNQLKGVTFKSEHFTPRTPAGKESRKRAGAYGCSRKLLERLTEV
EEIIDIGKPGVTVTPAFSVGEEVLKKSNLCRDTTEVCDVGTSAPFNLDPSEDRKLSSFNQ
LGNFPSPKELASLDESFLAKRCGLGYRAGRIIKLAKGIVEGSIQLKELEEACSNPSLSDY
DKMAEQLREIDGFGPFTCANVLMCLGYYHVIPTDSETIRHLKQVHARTSTIQNVQRDVEN
IYGKYAPFQFLAYWSEVWHFYEERFGKLSEMPHSEYKLITAANMRRKRNGKCKKLKITSA
EKLGV*

Transcript Sequence

Transcript ID

PGSC0003DMT400046923
Transcript Infomation

pacid=37439967 locus=PGSC0003DMG400018222 ID=PGSC0003DMT400046923.v4.03 annot-version=v4.03
Sequence

ATGCAGCACCGGCAAGAGATCGATCGCCACCGCAGCGTGGTGGTGGAGCTACCACTCGGA
GACGGAGACGGAGACGGAGGCTGCGCCACATTCGATTTGGAAAAAGCAGTATGTAGCCAC
GGCCTATTTATGATGGCCCCAAACCGCTGGGACTCTCTCTCCAAAACCCTAGAACGCCCA
CTACACCTCTCCGAAAACATCAACGATGATGATCACGAACAATCAGTTCTCGTCCAAATT
AATCAACCCTCGGATTCTCCTCATTCACTCCTTCTTCGAGTTTTCGGTACTGCTTCCCTT
TCTACTATACACCAACGCTCTCTGCTGGGTCAAGTGAGGCGAATGGTGAGATTATCAGTG
GAAGAGAATAAAAGAGTGAAACAGTTTCAGGAGATTTGTGGAGAAGCAAAGGACAGGGGA
CTTGGGAGAGTGTTTAGATCGCCGACATTGTTTGAGGACATGGTGAAGTGTATGCTGCTC
TGCAATTGCCAGTGGTCAAGGACGTTGAGCATGGCTGAAGCATTATGTGAGCTTCAGTTG
GAGCTGAACTGTCCCTCGTCAGCTGCATCTTTTCCTGATCCTGATAATCAAAATCAGTTG
AAGGGCGTAACTTTCAAGTCTGAGCATTTCACTCCAAGAACACCAGCAGGAAAAGAATCA
CGGAAAAGAGCTGGAGCTTATGGATGTTCCAGAAAATTGTTGGAGAGGCTTACCGAAGTC
GAAGAAATCATAGATATAGGGAAACCGGGTGTAACTGTGACACCTGCATTTTCAGTTGGT
GAAGAGGTTCTCAAAAAAAGTAATCTTTGTCGAGATACTACTGAGGTTTGCGATGTTGGT
ACAAGTGCACCATTCAATCTTGATCCTTCAGAAGATAGAAAGCTGAGCTCTTTTAATCAG
CTTGGGAACTTCCCTAGCCCGAAAGAATTGGCAAGCCTTGATGAAAGTTTTCTAGCAAAG
CGTTGTGGTCTTGGTTATAGAGCTGGCCGCATTATAAAGCTTGCTAAGGGCATAGTTGAA
GGCAGTATTCAGTTGAAAGAACTTGAAGAAGCTTGTAGCAACCCAAGCTTGTCCGATTAT
GATAAAATGGCTGAGCAGCTGAGAGAAATAGATGGATTTGGCCCATTTACTTGTGCTAAT
GTACTGATGTGCTTGGGTTATTATCATGTGATTCCTACTGATTCAGAAACAATTAGGCAT
CTAAAGCAGGTTCATGCAAGAACCTCCACCATACAGAACGTTCAAAGAGATGTTGAAAAT
ATTTATGGGAAGTATGCACCGTTTCAGTTCTTAGCATATTGGTCGGAGGTGTGGCACTTT
TATGAGGAACGGTTTGGTAAGCTTAGCGAGATGCCCCACTCAGAATATAAACTTATTACT
GCCGCAAATATGAGACGGAAAAGAAATGGCAAATGCAAGAAGTTGAAGATAACCTCAGCA
GAAAAGCTTGGCGTGTAA