Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046864
CDS Infomation

pacid=37462559 polypeptide=PGSC0003DMP400031716 locus=PGSC0003DMG400018199 ID=PGSC0003DMT400046864.v4.03 annot-version=v4.03
Sequence

ATGGAGTATTTTCTTCTTGTTCCGCTGCTTGTCTTCATTTTCTTTTTTCATAAGTGCTTC
TTTAGCCCTTCAAACACACAAAAAAGGTTATTACCACCATCTCCAACAAAGCTTCCAATC
ATAGGTAATCTCCATCAACTTGGATCGCTTCCTCATCGTTCTCTCCATAAACTATCCAAA
AAATATGGTCCACTCATGTTACTTCACTTTGGCAGTAAGCCAGTGCTTATTGCTTCCTCT
GTCGATGCTGCTCGCGATATCATGAAAATTCACGATCTTGTTTGGTCAAATAGACCTAAA
TCTAGCATCGCTGATGGACTCCTGTATGACTCCAAGGACGTGTCTTTTAGTCCGTATGGT
GAATACTGGAGACAAATTAGAAGTGTTACGGTGCTTCACCTTCTCAGCAACAAAAGAGTC
CAATCATATCGTCATGTGAGAGAAGAAGAAACATCAAACATGATTGATAAAATTAGGCAA
GAGTGTGATTCAGTGATAGACTTGAGAGATGTTTTAAGCTGTATGACTAATAACATAATT
AGCAGAGTGAATATAGGAAGGACATACAATGAAGGGGAAAGTGGAATAGCTCTAAAGGCT
TACCTAGAAGAAATTCTTTTACTTGCAGGTGTTTTTAACATTGGGGATTATATTCCGTGG
CTTAAATGGCTCAATAAAATCAATGGTCTGAATAGCAGAGTGAAGAAAGTAGCTAAAGGT
TTGGATGCATTTCTAGAGAGCGTGATTGAAGAACGAGTGATTAGGAACAAGAATGCAGAA
TACAGTGCGGGTGAAGCTAAAGATTTCGTGGACGTTTTGCTAGAAATTCAGAACGGAAAG
GAGACTGGTTTTCCACTTCAAAGAGATACATTGAAAGCTCTCCTTTTGGATGCATTTGTT
GCTGGCACAGATTCAACGTATACAGTTTTAGAGTGGACAATGACGGAGCTTTTGAGGCAT
CCAAGAGTTCTGAAAAAGTTAGAGGATGAAATGCGAGTATTAGGCCAAGGGAAAACAGAG
ATAACAGAGGATGACTTAAGAAATATGCAGTATCTTAAAGCAGTGATCAAAGAGTCCCTC
AGGCTTCATGCACCTGTTCCACTTCTACTTCCTCAAGAATCGATGGAAGAAGTAAAATTA
TTTGACTATGACATACCTGCTAAAACTGAAGTCCTTATTAATGCTTGGGCCATCGGCAGA
GACCCATTATCGTGGGATGATCCAGAGGTGTACCTGCCAGAAAGGTTCTTGAATAGTGAT
ATTGATGTCAAAGGACTAAACTTTGAGTTGATTCCGTTTGGAGCTGGCAGGAGGGGCTGT
CCAGGAATTACTTTTGCTATTATGGAACCTTCTGTACAAATTCAATTTTGCATTACCAAA
AGGGATAAAAGGGGAGGATTTGGACATGACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031716
PEP Infomation

pacid=37462559 transcript=PGSC0003DMT400046864 locus=PGSC0003DMG400018199 ID=PGSC0003DMT400046864.v4.03 annot-version=v4.03
Sequence

MEYFLLVPLLVFIFFFHKCFFSPSNTQKRLLPPSPTKLPIIGNLHQLGSLPHRSLHKLSK
KYGPLMLLHFGSKPVLIASSVDAARDIMKIHDLVWSNRPKSSIADGLLYDSKDVSFSPYG
EYWRQIRSVTVLHLLSNKRVQSYRHVREEETSNMIDKIRQECDSVIDLRDVLSCMTNNII
SRVNIGRTYNEGESGIALKAYLEEILLLAGVFNIGDYIPWLKWLNKINGLNSRVKKVAKG
LDAFLESVIEERVIRNKNAEYSAGEAKDFVDVLLEIQNGKETGFPLQRDTLKALLLDAFV
AGTDSTYTVLEWTMTELLRHPRVLKKLEDEMRVLGQGKTEITEDDLRNMQYLKAVIKESL
RLHAPVPLLLPQESMEEVKLFDYDIPAKTEVLINAWAIGRDPLSWDDPEVYLPERFLNSD
IDVKGLNFELIPFGAGRRGCPGITFAIMEPSVQIQFCITKRDKRGGFGHD*

Transcript Sequence

Transcript ID

PGSC0003DMT400046864
Transcript Infomation

pacid=37462559 locus=PGSC0003DMG400018199 ID=PGSC0003DMT400046864.v4.03 annot-version=v4.03
Sequence

ATGGAGTATTTTCTTCTTGTTCCGCTGCTTGTCTTCATTTTCTTTTTTCATAAGTGCTTC
TTTAGCCCTTCAAACACACAAAAAAGGTTATTACCACCATCTCCAACAAAGCTTCCAATC
ATAGGTAATCTCCATCAACTTGGATCGCTTCCTCATCGTTCTCTCCATAAACTATCCAAA
AAATATGGTCCACTCATGTTACTTCACTTTGGCAGTAAGCCAGTGCTTATTGCTTCCTCT
GTCGATGCTGCTCGCGATATCATGAAAATTCACGATCTTGTTTGGTCAAATAGACCTAAA
TCTAGCATCGCTGATGGACTCCTGTATGACTCCAAGGACGTGTCTTTTAGTCCGTATGGT
GAATACTGGAGACAAATTAGAAGTGTTACGGTGCTTCACCTTCTCAGCAACAAAAGAGTC
CAATCATATCGTCATGTGAGAGAAGAAGAAACATCAAACATGATTGATAAAATTAGGCAA
GAGTGTGATTCAGTGATAGACTTGAGAGATGTTTTAAGCTGTATGACTAATAACATAATT
AGCAGAGTGAATATAGGAAGGACATACAATGAAGGGGAAAGTGGAATAGCTCTAAAGGCT
TACCTAGAAGAAATTCTTTTACTTGCAGGTGTTTTTAACATTGGGGATTATATTCCGTGG
CTTAAATGGCTCAATAAAATCAATGGTCTGAATAGCAGAGTGAAGAAAGTAGCTAAAGGT
TTGGATGCATTTCTAGAGAGCGTGATTGAAGAACGAGTGATTAGGAACAAGAATGCAGAA
TACAGTGCGGGTGAAGCTAAAGATTTCGTGGACGTTTTGCTAGAAATTCAGAACGGAAAG
GAGACTGGTTTTCCACTTCAAAGAGATACATTGAAAGCTCTCCTTTTGGATGCATTTGTT
GCTGGCACAGATTCAACGTATACAGTTTTAGAGTGGACAATGACGGAGCTTTTGAGGCAT
CCAAGAGTTCTGAAAAAGTTAGAGGATGAAATGCGAGTATTAGGCCAAGGGAAAACAGAG
ATAACAGAGGATGACTTAAGAAATATGCAGTATCTTAAAGCAGTGATCAAAGAGTCCCTC
AGGCTTCATGCACCTGTTCCACTTCTACTTCCTCAAGAATCGATGGAAGAAGTAAAATTA
TTTGACTATGACATACCTGCTAAAACTGAAGTCCTTATTAATGCTTGGGCCATCGGCAGA
GACCCATTATCGTGGGATGATCCAGAGGTGTACCTGCCAGAAAGGTTCTTGAATAGTGAT
ATTGATGTCAAAGGACTAAACTTTGAGTTGATTCCGTTTGGAGCTGGCAGGAGGGGCTGT
CCAGGAATTACTTTTGCTATTATGGAACCTTCTGTACAAATTCAATTTTGCATTACCAAA
AGGGATAAAAGGGGAGGATTTGGACATGACTGA