Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046848
CDS Infomation

pacid=37463193 polypeptide=PGSC0003DMP400031707 locus=PGSC0003DMG400018194 ID=PGSC0003DMT400046848.v4.03 annot-version=v4.03
Sequence

ATGGATGCCGCAAATTTAGCCATGAAATCTTCTTCTTCTTCCTTCTTTTCGAAAACCCCA
TGTCTATTTTCTAGTCCTAAACCCATTTCAAGAGGACCCTCCTCTGTTTATACACTGCCC
TCGACTTTTAGACCCCTTGTGAAATGCATACAAGCTCCGTTCTTACCATCCCCATTAAAC
CCTGATTCCAAAAAGCCCTTAAATTCACCCTTTACCTGTTCAGCTGTTACTTCTTTTCCT
TCCCAATCTCATCCCAATGCGCATTCGGATGCTGCTTCTTCTTCTTCTGCCAAGCTTAAA
CTTCTGATTTCGGAATTCCAGTCCCTAGTTGAACCAATCGATCGCGTGAAGCGTCTAATG
CACTACGCCTCACTGCTCCCTTCTATGGATGGGTCCGTTAAGACCACGGAGAATCGCGTG
CCGGGTTGTACTGCGCAGGTATGGCTGCATGTGAGTTTAGATGAGGAAGGCAAGATGAGA
GTTTTGGTGGACAGTGATTCGGAGCTAACTAAAGGGTTTTGCGCCTGTTTGGTTTGGCTG
CTTGATGGGGCTGTCCCAGATGAGGTGCTGGCGTTGAAAACAGAGGATTTGAATGCTCTG
AATGCTGTGGGGTTGAACAGGAAAGGATCTGCATCTAGGGTGAATACATGGCATAATGTG
TTGGTCAGCATGCAGAAAAGAACAAGGGCTGTGGTGGCGGAGCGCGATGGAAAGCCGCGC
AGCGAGCTGTTCCCATCTCTGGTAGTGACTGCTGATGGTATCCAACCCAAAGGGAGCTAT
GCTGAAGCCCAGGCGAGGTTCTTGTTTCCTGATGAATCAAGGGTCCAAGAACTCGTCAAT
GCGCTAAAAGAGAAGAAAATTGGAGTTGTTGCTCATTTTTACATGGATCCTGAAGTGCAA
GGTGTTCTAACTGCAGCACAGAAGTTTTGGCCCCATATACATATATCTGATTCTTTGGTC
ATGGCAGATTCAGCTGTCAATATGGCAAAATCTGGATGTCAATTTATAACTGTATTAGGT
GTAGATTTCATGTCAGAGAACGTGCGAGCTATTCTTGATCAAGCTGGATTTCCAGAGGTT
GGAGTTTATCGGATGTCGGATGAACACATTGGTTGCTCTTTGGCTGAAGCTGCATCCAGT
CCATCATACATGGATTATCTTACAACAGCTTCAGTTTCTTCTCCATCTCTGCATGTTGTC
TACATAAATACCTCTCTGGAGACAAAAGCATATTCCCATGAGCTTGTTCCAACCATAACA
TGTACTTCCTCTAATGTTGTGCAAACTATTCTACAGGCATTTGCTGAAGTACCTGACTTG
AAGGTGTGGTATGGTCCTGATACCTACATGGGCTCAAACATTATGGAATTGTTCAGTCAG
ATGTCCGTGATGACTGATGAAGAAATTTCTGAGATTCATCCTTTACACAACAGAATGTCC
ATTAAATCCTTGCTTCCTCGACTGCATTATTTTCAGGATGGGACATGCATTGTTCATCAC
CTCTTTGGTCATGAAGTTGTGGGGAAGATAAATGAAATGTATTCTGATGCATTCCTTACT
GCACACTTTGAAGTTCCTGGTGAAATGTTTTCTCTAGCAATGGAAGCTAAGAAAAGGGGC
ATGGGAGTAGTAGGTTCTACCCAAAACATACTAGATTTTATCAAACAAAGGGTACAAGAG
GCCTTGGATAGAAATGTAGATGACCATCTTCAATTTGTTTTAGGAACAGAATCAGGAATG
ATTACTTCAATAGTTGCTACAGTCCGTAAATTACTCTGTTCTGCTGACCCCTCTTCCGGA
GGAGCAAAAGTTAGTGTTGAGATTGTCTTTCCTGTCTCATCAGAATCAGTGACAAGAACA
TCTTTGGACCAAACGTTTGGTGAAATGAGGGATTCCTTGAAGGTCAATGTTATACCTGGA
GTTGCAAGTGGAGAGGGGTGTTCTCTTCACGGTGGATGTGCCTCTTGTCCATATATGAAG
ATGAACTCTCTTAGCTCGTTGCTAAGAGTTTGCCACAGCTTGCCCCATAACAAAGCTGAA
CTTTCAGCTTATGAGGCAGGACGTTTCAGTTTGCTAACCCCGAAAGGAAAACAAATTGCG
GATATTGGTTGTGAGCCAATTCTGCACATGAGACATTTTCAGGCTACAAAAAGATTACCA
GAGCAGCTCATCAATCAAATACTTCAACCTTGTGATAATGGACAATCCAGCTCGCATAAT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400031707
PEP Infomation

pacid=37463193 transcript=PGSC0003DMT400046848 locus=PGSC0003DMG400018194 ID=PGSC0003DMT400046848.v4.03 annot-version=v4.03
Sequence

MDAANLAMKSSSSSFFSKTPCLFSSPKPISRGPSSVYTLPSTFRPLVKCIQAPFLPSPLN
PDSKKPLNSPFTCSAVTSFPSQSHPNAHSDAASSSSAKLKLLISEFQSLVEPIDRVKRLM
HYASLLPSMDGSVKTTENRVPGCTAQVWLHVSLDEEGKMRVLVDSDSELTKGFCACLVWL
LDGAVPDEVLALKTEDLNALNAVGLNRKGSASRVNTWHNVLVSMQKRTRAVVAERDGKPR
SELFPSLVVTADGIQPKGSYAEAQARFLFPDESRVQELVNALKEKKIGVVAHFYMDPEVQ
GVLTAAQKFWPHIHISDSLVMADSAVNMAKSGCQFITVLGVDFMSENVRAILDQAGFPEV
GVYRMSDEHIGCSLAEAASSPSYMDYLTTASVSSPSLHVVYINTSLETKAYSHELVPTIT
CTSSNVVQTILQAFAEVPDLKVWYGPDTYMGSNIMELFSQMSVMTDEEISEIHPLHNRMS
IKSLLPRLHYFQDGTCIVHHLFGHEVVGKINEMYSDAFLTAHFEVPGEMFSLAMEAKKRG
MGVVGSTQNILDFIKQRVQEALDRNVDDHLQFVLGTESGMITSIVATVRKLLCSADPSSG
GAKVSVEIVFPVSSESVTRTSLDQTFGEMRDSLKVNVIPGVASGEGCSLHGGCASCPYMK
MNSLSSLLRVCHSLPHNKAELSAYEAGRFSLLTPKGKQIADIGCEPILHMRHFQATKRLP
EQLINQILQPCDNGQSSSHN*

Transcript Sequence

Transcript ID

PGSC0003DMT400046848
Transcript Infomation

pacid=37463193 locus=PGSC0003DMG400018194 ID=PGSC0003DMT400046848.v4.03 annot-version=v4.03
Sequence

ATGGATGCCGCAAATTTAGCCATGAAATCTTCTTCTTCTTCCTTCTTTTCGAAAACCCCA
TGTCTATTTTCTAGTCCTAAACCCATTTCAAGAGGACCCTCCTCTGTTTATACACTGCCC
TCGACTTTTAGACCCCTTGTGAAATGCATACAAGCTCCGTTCTTACCATCCCCATTAAAC
CCTGATTCCAAAAAGCCCTTAAATTCACCCTTTACCTGTTCAGCTGTTACTTCTTTTCCT
TCCCAATCTCATCCCAATGCGCATTCGGATGCTGCTTCTTCTTCTTCTGCCAAGCTTAAA
CTTCTGATTTCGGAATTCCAGTCCCTAGTTGAACCAATCGATCGCGTGAAGCGTCTAATG
CACTACGCCTCACTGCTCCCTTCTATGGATGGGTCCGTTAAGACCACGGAGAATCGCGTG
CCGGGTTGTACTGCGCAGGTATGGCTGCATGTGAGTTTAGATGAGGAAGGCAAGATGAGA
GTTTTGGTGGACAGTGATTCGGAGCTAACTAAAGGGTTTTGCGCCTGTTTGGTTTGGCTG
CTTGATGGGGCTGTCCCAGATGAGGTGCTGGCGTTGAAAACAGAGGATTTGAATGCTCTG
AATGCTGTGGGGTTGAACAGGAAAGGATCTGCATCTAGGGTGAATACATGGCATAATGTG
TTGGTCAGCATGCAGAAAAGAACAAGGGCTGTGGTGGCGGAGCGCGATGGAAAGCCGCGC
AGCGAGCTGTTCCCATCTCTGGTAGTGACTGCTGATGGTATCCAACCCAAAGGGAGCTAT
GCTGAAGCCCAGGCGAGGTTCTTGTTTCCTGATGAATCAAGGGTCCAAGAACTCGTCAAT
GCGCTAAAAGAGAAGAAAATTGGAGTTGTTGCTCATTTTTACATGGATCCTGAAGTGCAA
GGTGTTCTAACTGCAGCACAGAAGTTTTGGCCCCATATACATATATCTGATTCTTTGGTC
ATGGCAGATTCAGCTGTCAATATGGCAAAATCTGGATGTCAATTTATAACTGTATTAGGT
GTAGATTTCATGTCAGAGAACGTGCGAGCTATTCTTGATCAAGCTGGATTTCCAGAGGTT
GGAGTTTATCGGATGTCGGATGAACACATTGGTTGCTCTTTGGCTGAAGCTGCATCCAGT
CCATCATACATGGATTATCTTACAACAGCTTCAGTTTCTTCTCCATCTCTGCATGTTGTC
TACATAAATACCTCTCTGGAGACAAAAGCATATTCCCATGAGCTTGTTCCAACCATAACA
TGTACTTCCTCTAATGTTGTGCAAACTATTCTACAGGCATTTGCTGAAGTACCTGACTTG
AAGGTGTGGTATGGTCCTGATACCTACATGGGCTCAAACATTATGGAATTGTTCAGTCAG
ATGTCCGTGATGACTGATGAAGAAATTTCTGAGATTCATCCTTTACACAACAGAATGTCC
ATTAAATCCTTGCTTCCTCGACTGCATTATTTTCAGGATGGGACATGCATTGTTCATCAC
CTCTTTGGTCATGAAGTTGTGGGGAAGATAAATGAAATGTATTCTGATGCATTCCTTACT
GCACACTTTGAAGTTCCTGGTGAAATGTTTTCTCTAGCAATGGAAGCTAAGAAAAGGGGC
ATGGGAGTAGTAGGTTCTACCCAAAACATACTAGATTTTATCAAACAAAGGGTACAAGAG
GCCTTGGATAGAAATGTAGATGACCATCTTCAATTTGTTTTAGGAACAGAATCAGGAATG
ATTACTTCAATAGTTGCTACAGTCCGTAAATTACTCTGTTCTGCTGACCCCTCTTCCGGA
GGAGCAAAAGTTAGTGTTGAGATTGTCTTTCCTGTCTCATCAGAATCAGTGACAAGAACA
TCTTTGGACCAAACGTTTGGTGAAATGAGGGATTCCTTGAAGGTCAATGTTATACCTGGA
GTTGCAAGTGGAGAGGGGTGTTCTCTTCACGGTGGATGTGCCTCTTGTCCATATATGAAG
ATGAACTCTCTTAGCTCGTTGCTAAGAGTTTGCCACAGCTTGCCCCATAACAAAGCTGAA
CTTTCAGCTTATGAGGCAGGACGTTTCAGTTTGCTAACCCCGAAAGGAAAACAAATTGCG
GATATTGGTTGTGAGCCAATTCTGCACATGAGACATTTTCAGGCTACAAAAAGATTACCA
GAGCAGCTCATCAATCAAATACTTCAACCTTGTGATAATGGACAATCCAGCTCGCATAAT
TAA