Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046833
CDS Infomation

pacid=37459956 polypeptide=PGSC0003DMP400031697 locus=PGSC0003DMG400018187 ID=PGSC0003DMT400046833.v4.03 annot-version=v4.03
Sequence

ATGAATCACGGCAAGAGAATCCTGAGTTCGCTTCGATTGAGGAATTCTCTGTTTTTCACT
CAGCTTTCACGAGCTCCTTCTTCCAATCATCAGGTGACTCAACACTTAAATCTTTCTCCT
TCACTTCTCACGCAAATTTACACTTCCACTAGTATTCTCGGTGCAAGTCAAAATGTCTTC
TTTTCATCAAAAACTGAATCTTTTGTTGACATTATACTATCCAATGACTGGTCGAAACAA
TTAGAAAAGGATTTAGGAAAAAATGATCTTCCGGTGACCCATGAAGCTGTTATGTATTTG
TTGAAGAAACTCGATAAAGAACCGCAAAAGGCTGGGGATTTCTTGAAATGGGTTGTTAAG
CAAAATGGGTTTAAACCTAGTTCTTCTATGTACAGTCTGATGCTTAGAATTTATGCTAAC
AGGGATTCAATGAAGGACTTTTGGACTACTATTAAGGAAATGAAAGAGAACGGGTTTTAT
ATTGATGAGGAAACGTATAAATCAATTCATTCTATTTTTCGGAATTTGAAAATGGAAACT
GATGCCACTGCTTTAAAGCATTTCTATGGGAGGATGATTAAAGATAATGCTATGGGTGAT
GTGGCAAAAGATGTGTCTGAATTGATTACAAAACATGAATGGGGAGTTGAGGTGGAGAGA
CAATTAGGGGAGATGAAACTCCCGGTGTCGGATAATTTTGTGCTTAGGGTGTTGAAGGAA
CTTAGAGAAATAGGATATCCACTGAAAGCTTTCAGCTTTTTCAAATGGGTTGCGAGGAAT
TTAGATTTTCAGCACACCACCATTACTTATAATGGGATTCTTAGGGTTCTTTGCCGAGAA
GAGTCGATTGAGGAGTTCTGGGGTGTGGTAAAAGAGATGATGAGCCTGGGGTTTGAAATA
GATCTTGATACATATATAAAAATCTCAAGGCATTTTCAGAAGATTAAGATGTTGAAAGAT
GCAGTAGAACTATATGAACTGATGATGGATGGTCAGTTTAAACCATCACTTGGTGAGTGC
AATATTCTTTTAAGATCCATTGCACAGTCACATCCCTCAGATCTTGATTTGCTATTTAGA
GTTGTGGAAAAATTTGAGGCCGCAGGGCATTCACGCTCAAAGATTATTTATGATGTCATT
CATAGGTGTTTGACTAACTTGGGGCGATTTGAGGAAGCAGAGAAGATAACAGAAGCTATG
AGAGATGCAGGATTTGAACCTGACAATATTACCTACAGCCAATTAATATATGGACTTTGC
AAAGTGAGGAGGCTGGAGGAGGCATCAAAGGTGATAGATGTGATGGAAGAATGTGGATGC
ATTCCGGATATCAAGACTTGGACTGTTCTGATACAAGGGCATTGTTTTGCTGGTGAAGTT
GATAAGGCGCTGTTTTGTTTTGCTAAGATGATGGAGAGAAATGTTGATACAGATGCTGAT
TTGTTGGATGTACTACTTAATGGTTTTCTGAGTCAAAGAAGAGTTTTTGGTGCATATCAG
TTATTGACCGAGTTGGTGAATAAGTTTCAAATGCGCCCATGGCAAGCAACATACAAACTT
GTCATTCAAAAGCTCTTAGGGGAAAGGAAATTCGAAGAAGCGCTTGATCTACTCCGTCGG
ATGAAGAAACACAATTATCCACCTTTTCCAGAACCCTTTCTTCAATATATTTCAAAGTCA
GGAACAGTGGAAGATGCAGTGGAGTTTTTGAAGGCGTTGAGTGTCAAGGACTATCCATCT
GTTTCAGCCTACCAACATGTTTTCCAGTCCTTCTTTGCAGAAGGTAGACATTCTGAGGCA
AAAGATCTGCTCTACAAGTGCCCACATCATATTCGCCAACACCCAGCAATTTGTGGCCTC
TTTGGTTCGTCAAATTCTAACAGTGGAAAAGTGAAAAGGTTCCCCCGGCAGAGTTCGACT
TCTGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400031697
PEP Infomation

pacid=37459956 transcript=PGSC0003DMT400046833 locus=PGSC0003DMG400018187 ID=PGSC0003DMT400046833.v4.03 annot-version=v4.03
Sequence

MNHGKRILSSLRLRNSLFFTQLSRAPSSNHQVTQHLNLSPSLLTQIYTSTSILGASQNVF
FSSKTESFVDIILSNDWSKQLEKDLGKNDLPVTHEAVMYLLKKLDKEPQKAGDFLKWVVK
QNGFKPSSSMYSLMLRIYANRDSMKDFWTTIKEMKENGFYIDEETYKSIHSIFRNLKMET
DATALKHFYGRMIKDNAMGDVAKDVSELITKHEWGVEVERQLGEMKLPVSDNFVLRVLKE
LREIGYPLKAFSFFKWVARNLDFQHTTITYNGILRVLCREESIEEFWGVVKEMMSLGFEI
DLDTYIKISRHFQKIKMLKDAVELYELMMDGQFKPSLGECNILLRSIAQSHPSDLDLLFR
VVEKFEAAGHSRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLC
KVRRLEEASKVIDVMEECGCIPDIKTWTVLIQGHCFAGEVDKALFCFAKMMERNVDTDAD
LLDVLLNGFLSQRRVFGAYQLLTELVNKFQMRPWQATYKLVIQKLLGERKFEEALDLLRR
MKKHNYPPFPEPFLQYISKSGTVEDAVEFLKALSVKDYPSVSAYQHVFQSFFAEGRHSEA
KDLLYKCPHHIRQHPAICGLFGSSNSNSGKVKRFPRQSSTSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400046833
Transcript Infomation

pacid=37459956 locus=PGSC0003DMG400018187 ID=PGSC0003DMT400046833.v4.03 annot-version=v4.03
Sequence

ATGAATCACGGCAAGAGAATCCTGAGTTCGCTTCGATTGAGGAATTCTCTGTTTTTCACT
CAGCTTTCACGAGCTCCTTCTTCCAATCATCAGGTGACTCAACACTTAAATCTTTCTCCT
TCACTTCTCACGCAAATTTACACTTCCACTAGTATTCTCGGTGCAAGTCAAAATGTCTTC
TTTTCATCAAAAACTGAATCTTTTGTTGACATTATACTATCCAATGACTGGTCGAAACAA
TTAGAAAAGGATTTAGGAAAAAATGATCTTCCGGTGACCCATGAAGCTGTTATGTATTTG
TTGAAGAAACTCGATAAAGAACCGCAAAAGGCTGGGGATTTCTTGAAATGGGTTGTTAAG
CAAAATGGGTTTAAACCTAGTTCTTCTATGTACAGTCTGATGCTTAGAATTTATGCTAAC
AGGGATTCAATGAAGGACTTTTGGACTACTATTAAGGAAATGAAAGAGAACGGGTTTTAT
ATTGATGAGGAAACGTATAAATCAATTCATTCTATTTTTCGGAATTTGAAAATGGAAACT
GATGCCACTGCTTTAAAGCATTTCTATGGGAGGATGATTAAAGATAATGCTATGGGTGAT
GTGGCAAAAGATGTGTCTGAATTGATTACAAAACATGAATGGGGAGTTGAGGTGGAGAGA
CAATTAGGGGAGATGAAACTCCCGGTGTCGGATAATTTTGTGCTTAGGGTGTTGAAGGAA
CTTAGAGAAATAGGATATCCACTGAAAGCTTTCAGCTTTTTCAAATGGGTTGCGAGGAAT
TTAGATTTTCAGCACACCACCATTACTTATAATGGGATTCTTAGGGTTCTTTGCCGAGAA
GAGTCGATTGAGGAGTTCTGGGGTGTGGTAAAAGAGATGATGAGCCTGGGGTTTGAAATA
GATCTTGATACATATATAAAAATCTCAAGGCATTTTCAGAAGATTAAGATGTTGAAAGAT
GCAGTAGAACTATATGAACTGATGATGGATGGTCAGTTTAAACCATCACTTGGTGAGTGC
AATATTCTTTTAAGATCCATTGCACAGTCACATCCCTCAGATCTTGATTTGCTATTTAGA
GTTGTGGAAAAATTTGAGGCCGCAGGGCATTCACGCTCAAAGATTATTTATGATGTCATT
CATAGGTGTTTGACTAACTTGGGGCGATTTGAGGAAGCAGAGAAGATAACAGAAGCTATG
AGAGATGCAGGATTTGAACCTGACAATATTACCTACAGCCAATTAATATATGGACTTTGC
AAAGTGAGGAGGCTGGAGGAGGCATCAAAGGTGATAGATGTGATGGAAGAATGTGGATGC
ATTCCGGATATCAAGACTTGGACTGTTCTGATACAAGGGCATTGTTTTGCTGGTGAAGTT
GATAAGGCGCTGTTTTGTTTTGCTAAGATGATGGAGAGAAATGTTGATACAGATGCTGAT
TTGTTGGATGTACTACTTAATGGTTTTCTGAGTCAAAGAAGAGTTTTTGGTGCATATCAG
TTATTGACCGAGTTGGTGAATAAGTTTCAAATGCGCCCATGGCAAGCAACATACAAACTT
GTCATTCAAAAGCTCTTAGGGGAAAGGAAATTCGAAGAAGCGCTTGATCTACTCCGTCGG
ATGAAGAAACACAATTATCCACCTTTTCCAGAACCCTTTCTTCAATATATTTCAAAGTCA
GGAACAGTGGAAGATGCAGTGGAGTTTTTGAAGGCGTTGAGTGTCAAGGACTATCCATCT
GTTTCAGCCTACCAACATGTTTTCCAGTCCTTCTTTGCAGAAGGTAGACATTCTGAGGCA
AAAGATCTGCTCTACAAGTGCCCACATCATATTCGCCAACACCCAGCAATTTGTGGCCTC
TTTGGTTCGTCAAATTCTAACAGTGGAAAAGTGAAAAGGTTCCCCCGGCAGAGTTCGACT
TCTGTGTAG