Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046819
CDS Infomation

pacid=37459141 polypeptide=PGSC0003DMP400031684 locus=PGSC0003DMG400018179 ID=PGSC0003DMT400046819.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGAAGAGAAATCAGTGCAAGAAGAGCTTTCACTTCCGATTTTACTAGCTGAC
AGAGTAATCAAATCTGCTCAAGAAGCCGAATCCTCAAAAGTAGAATGCGCCGATCTCGCA
CGCCACGCTACTCAGCTGAGCCAGTTTCTCCGATCAACTGTTCGGCTCACCAGTTCTTCA
CAATCCCAGTCTCTTTACGACCGGCCCATCCGCCGGATAACTTCTGAAGTCACCAAAACT
CTTGAACGAGCACTTACTCTTGTACGCAAGTGCCGTCACAAGCCTAATCTACTCCGTCAT
GTTCTTGCCATCACTTCCACCACTGATTTCCGGAAAGTTTCTATTCTTCTAGAAAATTCC
ATCGCCGACGTGACGTGGCTGTTATCCATCTTCGACCCGGAAGCTGGCCCGACACTTTCC
CTTCCTCCTATTGCTAGTAACGATCCGATTTTGGCTTGGGTTTGGTCTTATATTGCTACT
ATTCAAATGGGTAATCTTCAGCACCGAATTGATGCTGCTCAGGCATTAGCTACCTTAGCT
CTCGATAATGACCGGAACAAGAAAATGATTGTGGAAGAGAACGGAATTCCGCCTTTATTG
AAGTTACTGAAGGAGAGCAGTTCAGCAGAAGCACAAATTGCTGCGGCTACTACTTTGTAC
AACTTGGCTGATGATGAGGAAAGAGTGAGGGCAATAGCAAATGATCTTGGTGTTCAAATT
ATTGTCAAGGTGCTTGCGGAATCGCCCATGAGAGTTCAAATTCATGTGGCTAATTTGGTC
TCGAGGATGGCTGATTTGGACTTGTATGCCCAGGAAGAATTTGGGAGGGAGAATATAACG
AGGCCATTGGTGATTCATTTAGGAATGGATGTAGTTCTGGATGAACCCAAAGACGCACCG
CCCCGTAAGACTCCTAGTTTGCATTCTTTAGTTCAAATAAATAAGGAGATGGCCAGGAAT
AATTATAGTGGACATTCTAATTCTATGGATGGGAGCAGTAGGGGCGGGCATTACAGTAAT
AAGAAGGAGAAAGATAGGGAATTGGAGCCTCCTGAGGTGAAAGCTAAGCTTAAGGTAAGT
TGCGCGATGGCACTGTGGAAATTGGCTAAAGGTAGTTTGTTGAATAGCAGGAAGATCACT
GAGACTAAAGCTTTGCTTTGTTTGGCAAAGATTATTGAGAAGGAGAAGGGGGAATTGCAG
ATTAATTGTCTGATGACAGTGATGGAATTGGCTGCAGTTGCAGAGTCTAATGCTGAACTT
AGACGAGTGGCGTTCAAGCCTACTTCACCTGCTGGAAAAGCGGTTATTGATCAGCTATTG
AGGGTGATAAATGAGGAAACTGATGCTCCATTAGTGATTCCGGCTATTAAGGCGATTGGG
TCGTTGGCTAGGACATTTCCTGCAAAGGACACGAGAATCGTGGAGCATATAGTCGGTAAA
CTTGGGCATAGAAATACTGATGTTGCTGTGGAAGCATGTATTGCTTTGGGGAAATTTGCA
TGTCCGGACAATTTTAATTGTGTGGAGCACTCGAAGGCAATTGTTGAATATGATGGAGTT
CCAAAGCTGATGAATTTGCTGAGGTATGACCGAGGGCAGGTGCCCGAGCTCCAACTGCTC
TGCTACCTTGCTTTGCACGTAGGTAATAGTAAGGCCCTTGAGCAAGCAAAAGCCCTGAGC
ATCCTTGAGGGTGCTGCTCGTCATGTAGTTGCTCAGCGTCCTGATTTAAGGGAGTTGTTT
GCCAAGGCGATCCACCATCTTACTCTTTATCAAATTGGAGGTCATATGCATAGACAGGCT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400031684
PEP Infomation

pacid=37459141 transcript=PGSC0003DMT400046819 locus=PGSC0003DMG400018179 ID=PGSC0003DMT400046819.v4.03 annot-version=v4.03
Sequence

MAEEEKSVQEELSLPILLADRVIKSAQEAESSKVECADLARHATQLSQFLRSTVRLTSSS
QSQSLYDRPIRRITSEVTKTLERALTLVRKCRHKPNLLRHVLAITSTTDFRKVSILLENS
IADVTWLLSIFDPEAGPTLSLPPIASNDPILAWVWSYIATIQMGNLQHRIDAAQALATLA
LDNDRNKKMIVEENGIPPLLKLLKESSSAEAQIAAATTLYNLADDEERVRAIANDLGVQI
IVKVLAESPMRVQIHVANLVSRMADLDLYAQEEFGRENITRPLVIHLGMDVVLDEPKDAP
PRKTPSLHSLVQINKEMARNNYSGHSNSMDGSSRGGHYSNKKEKDRELEPPEVKAKLKVS
CAMALWKLAKGSLLNSRKITETKALLCLAKIIEKEKGELQINCLMTVMELAAVAESNAEL
RRVAFKPTSPAGKAVIDQLLRVINEETDAPLVIPAIKAIGSLARTFPAKDTRIVEHIVGK
LGHRNTDVAVEACIALGKFACPDNFNCVEHSKAIVEYDGVPKLMNLLRYDRGQVPELQLL
CYLALHVGNSKALEQAKALSILEGAARHVVAQRPDLRELFAKAIHHLTLYQIGGHMHRQA
*

Transcript Sequence

Transcript ID

PGSC0003DMT400046819
Transcript Infomation

pacid=37459141 locus=PGSC0003DMG400018179 ID=PGSC0003DMT400046819.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGAAGAGAAATCAGTGCAAGAAGAGCTTTCACTTCCGATTTTACTAGCTGAC
AGAGTAATCAAATCTGCTCAAGAAGCCGAATCCTCAAAAGTAGAATGCGCCGATCTCGCA
CGCCACGCTACTCAGCTGAGCCAGTTTCTCCGATCAACTGTTCGGCTCACCAGTTCTTCA
CAATCCCAGTCTCTTTACGACCGGCCCATCCGCCGGATAACTTCTGAAGTCACCAAAACT
CTTGAACGAGCACTTACTCTTGTACGCAAGTGCCGTCACAAGCCTAATCTACTCCGTCAT
GTTCTTGCCATCACTTCCACCACTGATTTCCGGAAAGTTTCTATTCTTCTAGAAAATTCC
ATCGCCGACGTGACGTGGCTGTTATCCATCTTCGACCCGGAAGCTGGCCCGACACTTTCC
CTTCCTCCTATTGCTAGTAACGATCCGATTTTGGCTTGGGTTTGGTCTTATATTGCTACT
ATTCAAATGGGTAATCTTCAGCACCGAATTGATGCTGCTCAGGCATTAGCTACCTTAGCT
CTCGATAATGACCGGAACAAGAAAATGATTGTGGAAGAGAACGGAATTCCGCCTTTATTG
AAGTTACTGAAGGAGAGCAGTTCAGCAGAAGCACAAATTGCTGCGGCTACTACTTTGTAC
AACTTGGCTGATGATGAGGAAAGAGTGAGGGCAATAGCAAATGATCTTGGTGTTCAAATT
ATTGTCAAGGTGCTTGCGGAATCGCCCATGAGAGTTCAAATTCATGTGGCTAATTTGGTC
TCGAGGATGGCTGATTTGGACTTGTATGCCCAGGAAGAATTTGGGAGGGAGAATATAACG
AGGCCATTGGTGATTCATTTAGGAATGGATGTAGTTCTGGATGAACCCAAAGACGCACCG
CCCCGTAAGACTCCTAGTTTGCATTCTTTAGTTCAAATAAATAAGGAGATGGCCAGGAAT
AATTATAGTGGACATTCTAATTCTATGGATGGGAGCAGTAGGGGCGGGCATTACAGTAAT
AAGAAGGAGAAAGATAGGGAATTGGAGCCTCCTGAGGTGAAAGCTAAGCTTAAGGTAAGT
TGCGCGATGGCACTGTGGAAATTGGCTAAAGGTAGTTTGTTGAATAGCAGGAAGATCACT
GAGACTAAAGCTTTGCTTTGTTTGGCAAAGATTATTGAGAAGGAGAAGGGGGAATTGCAG
ATTAATTGTCTGATGACAGTGATGGAATTGGCTGCAGTTGCAGAGTCTAATGCTGAACTT
AGACGAGTGGCGTTCAAGCCTACTTCACCTGCTGGAAAAGCGGTTATTGATCAGCTATTG
AGGGTGATAAATGAGGAAACTGATGCTCCATTAGTGATTCCGGCTATTAAGGCGATTGGG
TCGTTGGCTAGGACATTTCCTGCAAAGGACACGAGAATCGTGGAGCATATAGTCGGTAAA
CTTGGGCATAGAAATACTGATGTTGCTGTGGAAGCATGTATTGCTTTGGGGAAATTTGCA
TGTCCGGACAATTTTAATTGTGTGGAGCACTCGAAGGCAATTGTTGAATATGATGGAGTT
CCAAAGCTGATGAATTTGCTGAGGTATGACCGAGGGCAGGTGCCCGAGCTCCAACTGCTC
TGCTACCTTGCTTTGCACGTAGGTAATAGTAAGGCCCTTGAGCAAGCAAAAGCCCTGAGC
ATCCTTGAGGGTGCTGCTCGTCATGTAGTTGCTCAGCGTCCTGATTTAAGGGAGTTGTTT
GCCAAGGCGATCCACCATCTTACTCTTTATCAAATTGGAGGTCATATGCATAGACAGGCT
TAA