Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046818
CDS Infomation

pacid=37459482 polypeptide=PGSC0003DMP400031683 locus=PGSC0003DMG400018178 ID=PGSC0003DMT400046818.v4.03 annot-version=v4.03
Sequence

ATGGATTCTTCAGTCGTGGAGGGCGGCGCGTCGCTCCGTTCGCCAGGTACCGACGCTACA
AACCGCCGTGTTTCTTATTTCTTCGACTCTTCCATCGGCGAGTATTATTACGGCCAGGGT
CATCTAATGAAGCCTCACCGTATTCGTGTTGCCCACAATCTTATTTTAAACTATAATCTT
CACCGTAAGATGGAGATAATTCAACCGTTTCCGGCGACTAAGGAGGAAATCGGATGGTTC
CACTCGTCGGACTATGTGGAGTTTCTCTCTTCAGTTTCTCCGGAGATTGTTAATGATAAG
TACGATTCCTACCAACGTAGACGCTTCAATGTCGGTTCGGACTCGGAAAGCTTTGACTGC
CCTCTTTTTTATGGTCTTTTTGATTTTTGTCAAACTTCAGCTGGTGGCTCAATTGGCGCC
GCCGCTAAGCTTAATCGGAATGAAGCTGATATAGCTATCAATTGGGCTGGTGGGTTGCAT
CATGCAAAGAAAAGTGAAGCTTCTGGATTTTGCTATGTCAATGATATTGTTCTTGGAATT
CTAGAACTTCTCAAGGTCCACAAGCGTGTATTGTATGTAGACATTGATGTTCATCATGGG
GATGGAGTTGAGGAGGCTTTTTACACCACTGATCGGGTTATGACAGTGTCTTTTCATAAG
TTTGGAGACTTCTTTCCTGGTACAGGGCATGTCAAAGACATTGGTGCAAGTACCGGGAAG
TACTATGCCTTAAATGCACCATTGAATAATGGTATTGATGATGAAAGTTTCCGTAGTCTA
TTCCGTCCTGTAATCCAAAAAGTGATGGAGGTTTATCAACCTGAAGCTGTTGTTCTTCAA
TGTGGTGCTGATTCACTAGCCGGAGACAGGCTGGGTGTCTTTAACTTGTCTGTCAAAGGC
CATGCAGATTGCATTCGATTCCTCAGGTCTTTCAATGTCCCTTTAATGATGTTGGGTGGT
GGAGGTTATACTGTTAAAAATGTTGCTCGGTGCTGGTGCTATGAGACAGCAGTTGCAGTT
GGAGTAGAGCCTGATAATGATTTGCCTTACAGTGAGTTTTACGAGTATTTTGCCCCTGAT
TATATTCTATATCATGAATCATTACCCATGAAGAATGAGAATTCTCCCTCGGAACTAGAG
AGGATCAGGAACACTTTGCTGGAGCAACTCTCGCATTTACCCCATGTACCTAGTGTTCCA
TTTCAAGTGACACCTTCCGTAACAGAAGTTCCAGAAAAGGAAGACGAAAATATGGATCAA
AGGCCTAAGCCAGGGATACAGATGAGCCAGGATTACGATACTGATGACGAGGAGAAGTCA
AATAACGGAAAGTTCAGTAATTACTACAATTACTTCAACAATGAGAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031683
PEP Infomation

pacid=37459482 transcript=PGSC0003DMT400046818 locus=PGSC0003DMG400018178 ID=PGSC0003DMT400046818.v4.03 annot-version=v4.03
Sequence

MDSSVVEGGASLRSPGTDATNRRVSYFFDSSIGEYYYGQGHLMKPHRIRVAHNLILNYNL
HRKMEIIQPFPATKEEIGWFHSSDYVEFLSSVSPEIVNDKYDSYQRRRFNVGSDSESFDC
PLFYGLFDFCQTSAGGSIGAAAKLNRNEADIAINWAGGLHHAKKSEASGFCYVNDIVLGI
LELLKVHKRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHVKDIGASTGK
YYALNAPLNNGIDDESFRSLFRPVIQKVMEVYQPEAVVLQCGADSLAGDRLGVFNLSVKG
HADCIRFLRSFNVPLMMLGGGGYTVKNVARCWCYETAVAVGVEPDNDLPYSEFYEYFAPD
YILYHESLPMKNENSPSELERIRNTLLEQLSHLPHVPSVPFQVTPSVTEVPEKEDENMDQ
RPKPGIQMSQDYDTDDEEKSNNGKFSNYYNYFNNEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400046818
Transcript Infomation

pacid=37459482 locus=PGSC0003DMG400018178 ID=PGSC0003DMT400046818.v4.03 annot-version=v4.03
Sequence

ATGGATTCTTCAGTCGTGGAGGGCGGCGCGTCGCTCCGTTCGCCAGGTACCGACGCTACA
AACCGCCGTGTTTCTTATTTCTTCGACTCTTCCATCGGCGAGTATTATTACGGCCAGGGT
CATCTAATGAAGCCTCACCGTATTCGTGTTGCCCACAATCTTATTTTAAACTATAATCTT
CACCGTAAGATGGAGATAATTCAACCGTTTCCGGCGACTAAGGAGGAAATCGGATGGTTC
CACTCGTCGGACTATGTGGAGTTTCTCTCTTCAGTTTCTCCGGAGATTGTTAATGATAAG
TACGATTCCTACCAACGTAGACGCTTCAATGTCGGTTCGGACTCGGAAAGCTTTGACTGC
CCTCTTTTTTATGGTCTTTTTGATTTTTGTCAAACTTCAGCTGGTGGCTCAATTGGCGCC
GCCGCTAAGCTTAATCGGAATGAAGCTGATATAGCTATCAATTGGGCTGGTGGGTTGCAT
CATGCAAAGAAAAGTGAAGCTTCTGGATTTTGCTATGTCAATGATATTGTTCTTGGAATT
CTAGAACTTCTCAAGGTCCACAAGCGTGTATTGTATGTAGACATTGATGTTCATCATGGG
GATGGAGTTGAGGAGGCTTTTTACACCACTGATCGGGTTATGACAGTGTCTTTTCATAAG
TTTGGAGACTTCTTTCCTGGTACAGGGCATGTCAAAGACATTGGTGCAAGTACCGGGAAG
TACTATGCCTTAAATGCACCATTGAATAATGGTATTGATGATGAAAGTTTCCGTAGTCTA
TTCCGTCCTGTAATCCAAAAAGTGATGGAGGTTTATCAACCTGAAGCTGTTGTTCTTCAA
TGTGGTGCTGATTCACTAGCCGGAGACAGGCTGGGTGTCTTTAACTTGTCTGTCAAAGGC
CATGCAGATTGCATTCGATTCCTCAGGTCTTTCAATGTCCCTTTAATGATGTTGGGTGGT
GGAGGTTATACTGTTAAAAATGTTGCTCGGTGCTGGTGCTATGAGACAGCAGTTGCAGTT
GGAGTAGAGCCTGATAATGATTTGCCTTACAGTGAGTTTTACGAGTATTTTGCCCCTGAT
TATATTCTATATCATGAATCATTACCCATGAAGAATGAGAATTCTCCCTCGGAACTAGAG
AGGATCAGGAACACTTTGCTGGAGCAACTCTCGCATTTACCCCATGTACCTAGTGTTCCA
TTTCAAGTGACACCTTCCGTAACAGAAGTTCCAGAAAAGGAAGACGAAAATATGGATCAA
AGGCCTAAGCCAGGGATACAGATGAGCCAGGATTACGATACTGATGACGAGGAGAAGTCA
AATAACGGAAAGTTCAGTAATTACTACAATTACTTCAACAATGAGAACTGA