Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046778
CDS Infomation

pacid=37463207 polypeptide=PGSC0003DMP400031655 locus=PGSC0003DMG400018163 ID=PGSC0003DMT400046778.v4.03 annot-version=v4.03
Sequence

ATGGGAAGTGTTCTTTTTTCTTATCTGCTGTTTTTCTTGACAGCAGTTAGTGTTGTTCTT
GCTGTTTCTTCAGCAGATGGTTCATCTGATTCGTATCGCCTTTTGAGAATAAAGTCAGAA
CTTGTTGATCCAAATGGAGTTCTTGAAAACTGGTCTGAAGGGACTAACATGTGTACCTGG
AATGGAGTGGCATGTTCAGATGATAAATCTCATATTGTGAGGCTCAATCTTACTAGTTCA
GGACTAGAAGGTCAAATATCTCAAGAATTCGCGCATCTCACTTCTCTTCGAGTGATTGAT
CTTTCGGACAATTTTCTTAATGGAACAATCTCTCCTGCATTAGGAGAGCTTCATAACTTG
GAGGAATTGCTTCTTTTCTCTAATTTTCTCACTGGTGAGATTCCTTCGGATATCGGTCGT
TTGAGGAAGTTGCAAGTTCTTAGAATTGGAGCCAACATGCTGACAGGACAATTGATACCA
GAAATTGGTAAACTTTCTGAGTTGAGAGTGTTGGCTGTTGCTTATTGCCAATTCAGTGGA
AAGATACCAAATGAGATTGGTAATTTGAAGCAGCTGATAAATCTTGACTTGCAGCAAAAC
AGTCTTAGTGGCCCCATACCAGATGCAATTGGCGGCTGCAAAAATCTTCAAAATTTTGCA
GCATCAAACAACAGGATTGAGGGAAAGATTCCTGCTTCAATTGGTCAGCTCAAATCACTC
GAAATCTTGAACCTGGCAAACAACAGTTTTTCTGGTTCGATTCCTGTTGAGCTGAGCCAT
CTTTCCAATTTGAAGTACTTGAACTTGTTTGGCAATGAATTGGAAGGAGAAATTCCTTTT
GAGCTTAACAAGTTGGTTCTGGTTGAAACATTGGATTTGTCAAACAACAACTTTTCAGGA
ACCATAAGGCTTCTCAACACTCAGCTGAAGAATCTTGAGACTTTATCACTCTCTGGTAAC
TTCTTAACAGGAAGCATCCCGAGTAACTTCTGTCTCCGTGATTCAAGCTTAAGCCTACTC
ATTCTGGCTGACAATAAGCTGTCTGGGAACTTCCCGTTGGAGTTATTGAACTGCACGTCC
ATACGACAACTGGATCTCTCCGGTAACAGCTTTGGAGGAATGCTGCCACGAGGCCTCGAC
AGGCTAGAAAGTCTCACAGACCTCTTGCTCAACAATAACAGCTTTACTGGAACTATACCT
CCTGAAATAGGAAACTTGACTAACTTGGAAGATTTGTACCTGTTTCATAACATGCTCTCT
GGTGGAATTCCAGTTGAAATAGGAAAGCTTCAAAGGCTGCGTGAACTATACCTCTACGAA
AACCAGTTGTCAGGAAGTATTCCAAGAGAGTTGACAAACTGCTCCAGCTTAACAAGCGTT
GATTTCTTCGGTAACCAACTTTCAGGATCTATTCCTGATAACATTGGGAGGCTTAAGAAT
CTTGTTATTCTTCAGCTAAGGCAGAATGAGTTGTCAGGTCCGATTCCATCAAGCTTAGGC
TACTGCAGGAAGCTTCAAAAACTGGCTTTGGCTGATAACAAACTTTCAGGATCATTGCCA
CCAACTTTTCGATTTCTCTCAGAGATGGACCTGATTACTCTTTACAACAATTCCTTTGAA
GGTCCACTTCCTGAATCTCTTTCCCTTCTGAAAAATATCAGCAAAATTAACTTTTCTCAC
AATAAGTTCAGTGGAAACATTTTCCCCTTAGCTGGTTTAGATTCTCTGACAGCTCTTGAC
TTAACAAACAACAGTTTCTCTGGTCCTATTCCCTCTGAGCTAGCTTTGTCAAAAAATCTA
ACCCGTCTTCGCCTTGCTAATAATTTTTTCACTGGAGAACTCCCTTCTGAATTCGGACAA
CTTGAGGATCTCAGGTTTCTTGATTTATCATTCAACAATTTGACCGGAAATCTAGCACCT
TCCCTTGCTGGTCTTAAAAACCTTGGTCATTTTCTCCTTAGCTCTAACCAATTCTCGGGT
GAAATTCCCACATGGTTAGGAGGCATAGAAGATCTTGGTGAACTCGATCTTTCGTTCAAC
AACTTCACTGGAACAGTTCCAACAGAACTTGGAAACTCTCCAAAGTTACTCAAACTTTCT
CTAAGTTACAACAGATTATCAGGCCCCATACCACCAGAACTAGGCAATCTCACAAGTCTA
AATGTCTTGAATCTTCGAAGAAACAATCTCTCTGGTTCCATCCCTTCAACTCTTCAAAAA
TGCCAAAAGCTCTATGAGCTAAGGCTCTCTGAAAACAACTTAACAGGCTCAATCCCTTAC
GAACTTGGTTCTTTATCCGAATTACAAGTAATACTAGACCTCAGCAAGAATCACATTTCA
GGTGAAATCCCATCATCACTTGGAAACCTTGTAAAGTTAGAAAGATTGAATCTTTCATTC
AATCAACTTCAAGGAAAAGTCCCACCATCACTTGGAAGGTTATCAAGTTTACATAGACTC
AATCTTTCATATAATCATCTTCAAGGCCAAATCCCTTCCACATTTTCAGGATTCCCACTA
AGTTCTTTCATGGGAAACAATCATAACCTATGTGGCCCACCATTACTATCTTGTTCTGAA
CTAAAGGAACATGAGAGAATTTGGGAGCTGTCAAAAGCAAGTGTTGTAGGGATAACAGTG
GCTATTGTGTTAACAGCAACAGTTATATGCATGGTTCTGCTTTATATCATGCTGAGGATT
TGGTGCAATTGGAGAAAAGTTACAATTTCTTGCTCAGAGAATGGTGGAATTGAGAGTAAA
AGTAGACAAGGGGAAAATTGGGTATATGGAGAAGAGATCAAAAGTGGACAATATTGGAAT
ACAACATCATTAGTTTCATCTAAAGAGAAGCAAATATCTAAAGGGACTTGCATGTTTAAT
CTTAGTGTAAGTTCATCAGATAGCACAGAAAAACCTTTAGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031655
PEP Infomation

pacid=37463207 transcript=PGSC0003DMT400046778 locus=PGSC0003DMG400018163 ID=PGSC0003DMT400046778.v4.03 annot-version=v4.03
Sequence

MGSVLFSYLLFFLTAVSVVLAVSSADGSSDSYRLLRIKSELVDPNGVLENWSEGTNMCTW
NGVACSDDKSHIVRLNLTSSGLEGQISQEFAHLTSLRVIDLSDNFLNGTISPALGELHNL
EELLLFSNFLTGEIPSDIGRLRKLQVLRIGANMLTGQLIPEIGKLSELRVLAVAYCQFSG
KIPNEIGNLKQLINLDLQQNSLSGPIPDAIGGCKNLQNFAASNNRIEGKIPASIGQLKSL
EILNLANNSFSGSIPVELSHLSNLKYLNLFGNELEGEIPFELNKLVLVETLDLSNNNFSG
TIRLLNTQLKNLETLSLSGNFLTGSIPSNFCLRDSSLSLLILADNKLSGNFPLELLNCTS
IRQLDLSGNSFGGMLPRGLDRLESLTDLLLNNNSFTGTIPPEIGNLTNLEDLYLFHNMLS
GGIPVEIGKLQRLRELYLYENQLSGSIPRELTNCSSLTSVDFFGNQLSGSIPDNIGRLKN
LVILQLRQNELSGPIPSSLGYCRKLQKLALADNKLSGSLPPTFRFLSEMDLITLYNNSFE
GPLPESLSLLKNISKINFSHNKFSGNIFPLAGLDSLTALDLTNNSFSGPIPSELALSKNL
TRLRLANNFFTGELPSEFGQLEDLRFLDLSFNNLTGNLAPSLAGLKNLGHFLLSSNQFSG
EIPTWLGGIEDLGELDLSFNNFTGTVPTELGNSPKLLKLSLSYNRLSGPIPPELGNLTSL
NVLNLRRNNLSGSIPSTLQKCQKLYELRLSENNLTGSIPYELGSLSELQVILDLSKNHIS
GEIPSSLGNLVKLERLNLSFNQLQGKVPPSLGRLSSLHRLNLSYNHLQGQIPSTFSGFPL
SSFMGNNHNLCGPPLLSCSELKEHERIWELSKASVVGITVAIVLTATVICMVLLYIMLRI
WCNWRKVTISCSENGGIESKSRQGENWVYGEEIKSGQYWNTTSLVSSKEKQISKGTCMFN
LSVSSSDSTEKPLV*

Transcript Sequence

Transcript ID

PGSC0003DMT400046778
Transcript Infomation

pacid=37463207 locus=PGSC0003DMG400018163 ID=PGSC0003DMT400046778.v4.03 annot-version=v4.03
Sequence

ATGGGAAGTGTTCTTTTTTCTTATCTGCTGTTTTTCTTGACAGCAGTTAGTGTTGTTCTT
GCTGTTTCTTCAGCAGATGGTTCATCTGATTCGTATCGCCTTTTGAGAATAAAGTCAGAA
CTTGTTGATCCAAATGGAGTTCTTGAAAACTGGTCTGAAGGGACTAACATGTGTACCTGG
AATGGAGTGGCATGTTCAGATGATAAATCTCATATTGTGAGGCTCAATCTTACTAGTTCA
GGACTAGAAGGTCAAATATCTCAAGAATTCGCGCATCTCACTTCTCTTCGAGTGATTGAT
CTTTCGGACAATTTTCTTAATGGAACAATCTCTCCTGCATTAGGAGAGCTTCATAACTTG
GAGGAATTGCTTCTTTTCTCTAATTTTCTCACTGGTGAGATTCCTTCGGATATCGGTCGT
TTGAGGAAGTTGCAAGTTCTTAGAATTGGAGCCAACATGCTGACAGGACAATTGATACCA
GAAATTGGTAAACTTTCTGAGTTGAGAGTGTTGGCTGTTGCTTATTGCCAATTCAGTGGA
AAGATACCAAATGAGATTGGTAATTTGAAGCAGCTGATAAATCTTGACTTGCAGCAAAAC
AGTCTTAGTGGCCCCATACCAGATGCAATTGGCGGCTGCAAAAATCTTCAAAATTTTGCA
GCATCAAACAACAGGATTGAGGGAAAGATTCCTGCTTCAATTGGTCAGCTCAAATCACTC
GAAATCTTGAACCTGGCAAACAACAGTTTTTCTGGTTCGATTCCTGTTGAGCTGAGCCAT
CTTTCCAATTTGAAGTACTTGAACTTGTTTGGCAATGAATTGGAAGGAGAAATTCCTTTT
GAGCTTAACAAGTTGGTTCTGGTTGAAACATTGGATTTGTCAAACAACAACTTTTCAGGA
ACCATAAGGCTTCTCAACACTCAGCTGAAGAATCTTGAGACTTTATCACTCTCTGGTAAC
TTCTTAACAGGAAGCATCCCGAGTAACTTCTGTCTCCGTGATTCAAGCTTAAGCCTACTC
ATTCTGGCTGACAATAAGCTGTCTGGGAACTTCCCGTTGGAGTTATTGAACTGCACGTCC
ATACGACAACTGGATCTCTCCGGTAACAGCTTTGGAGGAATGCTGCCACGAGGCCTCGAC
AGGCTAGAAAGTCTCACAGACCTCTTGCTCAACAATAACAGCTTTACTGGAACTATACCT
CCTGAAATAGGAAACTTGACTAACTTGGAAGATTTGTACCTGTTTCATAACATGCTCTCT
GGTGGAATTCCAGTTGAAATAGGAAAGCTTCAAAGGCTGCGTGAACTATACCTCTACGAA
AACCAGTTGTCAGGAAGTATTCCAAGAGAGTTGACAAACTGCTCCAGCTTAACAAGCGTT
GATTTCTTCGGTAACCAACTTTCAGGATCTATTCCTGATAACATTGGGAGGCTTAAGAAT
CTTGTTATTCTTCAGCTAAGGCAGAATGAGTTGTCAGGTCCGATTCCATCAAGCTTAGGC
TACTGCAGGAAGCTTCAAAAACTGGCTTTGGCTGATAACAAACTTTCAGGATCATTGCCA
CCAACTTTTCGATTTCTCTCAGAGATGGACCTGATTACTCTTTACAACAATTCCTTTGAA
GGTCCACTTCCTGAATCTCTTTCCCTTCTGAAAAATATCAGCAAAATTAACTTTTCTCAC
AATAAGTTCAGTGGAAACATTTTCCCCTTAGCTGGTTTAGATTCTCTGACAGCTCTTGAC
TTAACAAACAACAGTTTCTCTGGTCCTATTCCCTCTGAGCTAGCTTTGTCAAAAAATCTA
ACCCGTCTTCGCCTTGCTAATAATTTTTTCACTGGAGAACTCCCTTCTGAATTCGGACAA
CTTGAGGATCTCAGGTTTCTTGATTTATCATTCAACAATTTGACCGGAAATCTAGCACCT
TCCCTTGCTGGTCTTAAAAACCTTGGTCATTTTCTCCTTAGCTCTAACCAATTCTCGGGT
GAAATTCCCACATGGTTAGGAGGCATAGAAGATCTTGGTGAACTCGATCTTTCGTTCAAC
AACTTCACTGGAACAGTTCCAACAGAACTTGGAAACTCTCCAAAGTTACTCAAACTTTCT
CTAAGTTACAACAGATTATCAGGCCCCATACCACCAGAACTAGGCAATCTCACAAGTCTA
AATGTCTTGAATCTTCGAAGAAACAATCTCTCTGGTTCCATCCCTTCAACTCTTCAAAAA
TGCCAAAAGCTCTATGAGCTAAGGCTCTCTGAAAACAACTTAACAGGCTCAATCCCTTAC
GAACTTGGTTCTTTATCCGAATTACAAGTAATACTAGACCTCAGCAAGAATCACATTTCA
GGTGAAATCCCATCATCACTTGGAAACCTTGTAAAGTTAGAAAGATTGAATCTTTCATTC
AATCAACTTCAAGGAAAAGTCCCACCATCACTTGGAAGGTTATCAAGTTTACATAGACTC
AATCTTTCATATAATCATCTTCAAGGCCAAATCCCTTCCACATTTTCAGGATTCCCACTA
AGTTCTTTCATGGGAAACAATCATAACCTATGTGGCCCACCATTACTATCTTGTTCTGAA
CTAAAGGAACATGAGAGAATTTGGGAGCTGTCAAAAGCAAGTGTTGTAGGGATAACAGTG
GCTATTGTGTTAACAGCAACAGTTATATGCATGGTTCTGCTTTATATCATGCTGAGGATT
TGGTGCAATTGGAGAAAAGTTACAATTTCTTGCTCAGAGAATGGTGGAATTGAGAGTAAA
AGTAGACAAGGGGAAAATTGGGTATATGGAGAAGAGATCAAAAGTGGACAATATTGGAAT
ACAACATCATTAGTTTCATCTAAAGAGAAGCAAATATCTAAAGGGACTTGCATGTTTAAT
CTTAGTGTAAGTTCATCAGATAGCACAGAAAAACCTTTAGTTTAA