Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046777
CDS Infomation

pacid=37462173 polypeptide=PGSC0003DMP400031654 locus=PGSC0003DMG400018162 ID=PGSC0003DMT400046777.v4.03 annot-version=v4.03
Sequence

ATGGCTGTGAAACGGAAAACAAACAAGAAAGAGATTGACGACGAAATTTATAGGGAAAAT
TGGTTTTTTACATCCAAGAAACAGAAATTTGATGAAGTTTTTAGGGCTGGATTCAAAGAT
TTTAGCTTTCAAGTTAAAGTTGAAGAAAGTAAATTGCCAAATTTTCTGCCCCAAGTTCAA
GATTACTGTTTTTCAGCAGAAAGTCCAAGATCCCATCTTCATCGTGAGGTCAAAGTTGAA
TTGAGGAAAATCAATATATGCTGCTCGGCAGGTAAGAAAGTTTGCAGTGATCTTAACGGA
AATTCGTTATGCCCCGATTGTGGAGTAAAGTCTAATTTTATAGCTGTAATTTGCAATGGG
ATGGAAGGGATTTATTTTCCAGAACTTCATATGGTTGAGTGTAGGTGTGGTTCTTGCAGG
GTTAAGAAGCTAACAGTTGGTGAATGGGAACGGCATGCTGGTTCCAGAGCGAAAAAGTGG
AAGGTCAGTATTAAGGTGATGATGACTATGCAGCCACTAGGGGAATGGGTTGCGAATAAC
AATGGTCATGGAATTACTCCTTTGAAAATAGATAGGCGGCAGCAATTGATGTCACTCCTG
CAAGAAAAGTATAATCCTGTTAATGCAAAGTGGACTGTAGAACGTTGCGCCATTTGTAGA
TGGATTGAAGATTGGGACTTCAACAAGATTATTATATGCAGTAGGTGCCAGATAGCTGTT
CATCAAGAATGTTATGGCGCTAGAGAGGTTCAAGATTTAGCTTCGTGGGTCTGCCGGGCT
TGTGAAACTCCAGAAGTTGAAAGGGAATGTTGTCTGTGTCCTGTCAAAGGGGGTGCGTTG
AAACCTACTGAAGTTGATCCTTTTTGGGTTCATGTCACTTGTGGTTGGTTTAGACCTGAA
ATTGCTTTTGTTGATTATGAGAAGATGGAGCCTGCCATAGGACTTCTCGTGATTCCACCA
AAGTCCTTTCATCAAGCGTGTAGTATATGCCAGCAGACTCATGGTTCTTGCATACAATGC
AGCAAATGCACGATATCTTATCACTCCACGTGTGCTTCCCGAGCTGGATACTACATGGAA
ATGCAGTGCTCAGAGAAGAACGGAACACAAACAACTAAATGGTTATCGTATTGTGCTTCT
CATAAAGCCCCAAGTGAGGATAACATTTTAGTCATGCGAACTTCTGGTGGAGTTTACTCG
AACCAAAATTTGCTTCAGAGAAGAAATGGAGGCCGAGTGTTGAAAGGTTTGAGGCTCATG
CCTTCCGATGCATCATCAGCTGAAACTAACGAACCAGATGATTTCTCTGCAGCTAGATGT
CGAGTTTTCAGACCATCAACGGACAAGAAAGCTAAACCAGAACCAATAATCCACAGGGTA
ACAAGGCCTCACCATCACTCACTAACAGCCATACAGAGTTTAACCTCAAAACAACATCAA
GAAGAAAAGAATTTTCCAACATTGAGAGAGAGATTGCATCATTTGAGTATAACTATAAAC
CACCGGGTTTGTTTTGGAAAATCCGGTATACATGGATGGGGTCTCTTTGCAAAGAGAAAG
CTTCAAGAAGGAGAAATGGTAGCCGAGTATGTGGGTGAGAAGATAAGGGGAAGTGTCGCT
GACCTTAGAGAGCGTAAATACAAGTCACAAGGCAAGAACTGTTACTTCTTCAGGATAAAT
GAAGAAGTAGTGATTGACGCAACCATGAAAGGATCCATAGCAAGATTAATCAACCACTCA
TGCATGCCAAATTGCTTTTCAAGGATCATGAGTCTTGGAAAAAACGAGGATCGGATCGTT
CTTTTTGCTAAAAAGGATGTTTCAGCAGGGAATGAGTTAACCTTTGATTACAGATTTGAA
CCTGATCAGAATGATGAGGTTAAAGTCCCCTGTCATTGTGGAGCTCCCAACTGTAGCAAA
TTCATGAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400031654
PEP Infomation

pacid=37462173 transcript=PGSC0003DMT400046777 locus=PGSC0003DMG400018162 ID=PGSC0003DMT400046777.v4.03 annot-version=v4.03
Sequence

MAVKRKTNKKEIDDEIYRENWFFTSKKQKFDEVFRAGFKDFSFQVKVEESKLPNFLPQVQ
DYCFSAESPRSHLHREVKVELRKINICCSAGKKVCSDLNGNSLCPDCGVKSNFIAVICNG
MEGIYFPELHMVECRCGSCRVKKLTVGEWERHAGSRAKKWKVSIKVMMTMQPLGEWVANN
NGHGITPLKIDRRQQLMSLLQEKYNPVNAKWTVERCAICRWIEDWDFNKIIICSRCQIAV
HQECYGAREVQDLASWVCRACETPEVERECCLCPVKGGALKPTEVDPFWVHVTCGWFRPE
IAFVDYEKMEPAIGLLVIPPKSFHQACSICQQTHGSCIQCSKCTISYHSTCASRAGYYME
MQCSEKNGTQTTKWLSYCASHKAPSEDNILVMRTSGGVYSNQNLLQRRNGGRVLKGLRLM
PSDASSAETNEPDDFSAARCRVFRPSTDKKAKPEPIIHRVTRPHHHSLTAIQSLTSKQHQ
EEKNFPTLRERLHHLSITINHRVCFGKSGIHGWGLFAKRKLQEGEMVAEYVGEKIRGSVA
DLRERKYKSQGKNCYFFRINEEVVIDATMKGSIARLINHSCMPNCFSRIMSLGKNEDRIV
LFAKKDVSAGNELTFDYRFEPDQNDEVKVPCHCGAPNCSKFMN*

Transcript Sequence

Transcript ID

PGSC0003DMT400046777
Transcript Infomation

pacid=37462173 locus=PGSC0003DMG400018162 ID=PGSC0003DMT400046777.v4.03 annot-version=v4.03
Sequence

ATGGCTGTGAAACGGAAAACAAACAAGAAAGAGATTGACGACGAAATTTATAGGGAAAAT
TGGTTTTTTACATCCAAGAAACAGAAATTTGATGAAGTTTTTAGGGCTGGATTCAAAGAT
TTTAGCTTTCAAGTTAAAGTTGAAGAAAGTAAATTGCCAAATTTTCTGCCCCAAGTTCAA
GATTACTGTTTTTCAGCAGAAAGTCCAAGATCCCATCTTCATCGTGAGGTCAAAGTTGAA
TTGAGGAAAATCAATATATGCTGCTCGGCAGGTAAGAAAGTTTGCAGTGATCTTAACGGA
AATTCGTTATGCCCCGATTGTGGAGTAAAGTCTAATTTTATAGCTGTAATTTGCAATGGG
ATGGAAGGGATTTATTTTCCAGAACTTCATATGGTTGAGTGTAGGTGTGGTTCTTGCAGG
GTTAAGAAGCTAACAGTTGGTGAATGGGAACGGCATGCTGGTTCCAGAGCGAAAAAGTGG
AAGGTCAGTATTAAGGTGATGATGACTATGCAGCCACTAGGGGAATGGGTTGCGAATAAC
AATGGTCATGGAATTACTCCTTTGAAAATAGATAGGCGGCAGCAATTGATGTCACTCCTG
CAAGAAAAGTATAATCCTGTTAATGCAAAGTGGACTGTAGAACGTTGCGCCATTTGTAGA
TGGATTGAAGATTGGGACTTCAACAAGATTATTATATGCAGTAGGTGCCAGATAGCTGTT
CATCAAGAATGTTATGGCGCTAGAGAGGTTCAAGATTTAGCTTCGTGGGTCTGCCGGGCT
TGTGAAACTCCAGAAGTTGAAAGGGAATGTTGTCTGTGTCCTGTCAAAGGGGGTGCGTTG
AAACCTACTGAAGTTGATCCTTTTTGGGTTCATGTCACTTGTGGTTGGTTTAGACCTGAA
ATTGCTTTTGTTGATTATGAGAAGATGGAGCCTGCCATAGGACTTCTCGTGATTCCACCA
AAGTCCTTTCATCAAGCGTGTAGTATATGCCAGCAGACTCATGGTTCTTGCATACAATGC
AGCAAATGCACGATATCTTATCACTCCACGTGTGCTTCCCGAGCTGGATACTACATGGAA
ATGCAGTGCTCAGAGAAGAACGGAACACAAACAACTAAATGGTTATCGTATTGTGCTTCT
CATAAAGCCCCAAGTGAGGATAACATTTTAGTCATGCGAACTTCTGGTGGAGTTTACTCG
AACCAAAATTTGCTTCAGAGAAGAAATGGAGGCCGAGTGTTGAAAGGTTTGAGGCTCATG
CCTTCCGATGCATCATCAGCTGAAACTAACGAACCAGATGATTTCTCTGCAGCTAGATGT
CGAGTTTTCAGACCATCAACGGACAAGAAAGCTAAACCAGAACCAATAATCCACAGGGTA
ACAAGGCCTCACCATCACTCACTAACAGCCATACAGAGTTTAACCTCAAAACAACATCAA
GAAGAAAAGAATTTTCCAACATTGAGAGAGAGATTGCATCATTTGAGTATAACTATAAAC
CACCGGGTTTGTTTTGGAAAATCCGGTATACATGGATGGGGTCTCTTTGCAAAGAGAAAG
CTTCAAGAAGGAGAAATGGTAGCCGAGTATGTGGGTGAGAAGATAAGGGGAAGTGTCGCT
GACCTTAGAGAGCGTAAATACAAGTCACAAGGCAAGAACTGTTACTTCTTCAGGATAAAT
GAAGAAGTAGTGATTGACGCAACCATGAAAGGATCCATAGCAAGATTAATCAACCACTCA
TGCATGCCAAATTGCTTTTCAAGGATCATGAGTCTTGGAAAAAACGAGGATCGGATCGTT
CTTTTTGCTAAAAAGGATGTTTCAGCAGGGAATGAGTTAACCTTTGATTACAGATTTGAA
CCTGATCAGAATGATGAGGTTAAAGTCCCCTGTCATTGTGGAGCTCCCAACTGTAGCAAA
TTCATGAATTAG