Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046769
CDS Infomation

pacid=37461515 polypeptide=PGSC0003DMP400031648 locus=PGSC0003DMG400018158 ID=PGSC0003DMT400046769.v4.03 annot-version=v4.03
Sequence

ATGGGTCGAGAAAAATTATTTTTGTGGCTGATTTTGCATTTCTGTGTTTTCGTCGTTTTG
AGTTACGGGGTTCGATGCGATGGCTCAGAGGTCACTTTGAAGTTATTGACTACTCCTCGT
GAATTCACAAACCGGAATTTTGCGAATTTTGCTTTTCAAGTTTTGGCCGGTGGTAATGGT
GACATTTGTGCGGATTGTTCAACTAGTTGTAAGTTGGATGATTATGTGCCTGCAGTTTGT
GAAGGTGGAGAAGTTTCTTACACACAGTTGCTTGATGGAAATCATACTTTTGAAGTTTGC
ACCAATGGATCTCTTGGAGTTGGATGTGCTCACTATAACTGGACTGTTGACACCATCCCG
CCTACAGCCTACATTACCACCCCAACATCTTTTACAAATGCTTCCAATGTTTCAGTGGAC
ATAACTTTCACTGAGCCATGTTGGAGCCAAGGTGGTTTCAGATGTGCTTCCACGAATTCC
TGCAATCTTCTCGTTTATGGAGCTGGACAGGTCGTGCCAAACACACTCAATGTTATTGAG
CCAGACCTCAAATTTTCTGTTGTCGTGAGTCTGTCTACACGTGATCAGTATGGAAGAGTG
ATCTTGGTAATGGATAAAAACTTCTGTTCGGACCCTGCTGGAAACAAATTTAAAAGGACA
GACAATTCAAGTTTATTTATACATTTTGATAGAAGGACAGTGTTCGCTGACATAAGGACT
CATATACCTGAAAGGCAGTTTCAAATTGACAGTGAAACGAGAACCGTGCGAGCAACAAAT
AGTACTGAAAACATGGAGGTGTATTTGTACTTTAATGAACCAATTTCCAACTCATCTACG
GAAATTTTGAATTCCCTGAGCATAAGTCAGGGATTGCTTACTCCCATTAGTGTAAATAGC
TTTGGAGAACGTAGATTTGGATTTCAGGTTAGAGGTATATCACAGACAGCCATAGTGACA
TTGAGCGTAAGATCAGACTTAATATTGAGCTGGCAGGGAACCTCCATTGCTCCTGTAGCT
CCTGTTACTTTTCTATACGATATGCAACGGCCTGCTGTCAGGTTGAGCACAACATCTAGG
ATGAGAACCTGTGACGAGCAAATTCCTGTACTGATAAAGTTCGTTAAGCCAGTGTTTGGC
TTTAATAGTTCTCATGTATCCATATCTGGAGGGCAGTTGCAGAGCTTTCAAGAAATGAGT
AGAAGCATGTACACTGTCAATATACAAGCCAGAGATGATTTTGTTTCTGTGAGCATCCCT
GAAAATGTAACTGGTGATGTTGCTGGAAACATGAACCTACAATCTAATATTCTCCGGCTC
AAGCACTATACTGTACCAGCAATATCTGAAGCGCTTTCCATCTTGGCAACTTCTGCTTTC
GTGGTTACGTCTTTTGCAGCAGGGCTCCTCACAGTTTCAACCGCTAGCCTCCAATCTGTT
GGTGCATACTCAAGACCAAGCTCTTTAATGACATCTGATCCTGCTAGAAATCTTTTTAGA
ATAGCTTGCCACATCCAGTTTTTTGCGTTGACGAGATGGTTGCCAGTTACCTTGCCAGTT
GAATACTATGAATTTGCTAGAGGCCTGCAATGGAGTGTTCCCTACTTCAGTCTCCCATGG
GAAATGGCAAGCATGCATCAATTTATGATGGGACCGGGTTCAACAACAGACCCTCATTCA
TACGGCTCTAAAATCAATGATTTTGGAATGAAGCCAGGCAAATACAATGTTAACAAAGCT
GCAGCATTATATGGGTTGCCACTTAGTCCTATGGAATATAGATCAATCTTCGGGAGCCAG
GATCTTCTTCCGGAAGCTCAGTATATCGTGGATCCAAAATATTCTAATGGGTGGAGGGAT
TTCAACAGAAGCATGTTTTGGTTAGCTGTTATTGGGGGCAGCTTGATATTGTTGCATGCT
TTGGTCCTTTTTGTTTTAAGACTGAGGAAGGACAGAGAAAAAAAGTGGAGCTATGGAGCC
TTGGTTTTTCCAAGATTTGAGATCTTTCTTACAATTCTGGCTATACCTTGCATTTGCAAA
GCCTCAGTAAATGTAGTTAAAGGAGGATCATCTGCAGGAATTGCTGTTGGCATTTTGCTG
TTGGGATTAGTATCATTTCTATTGTTAGCATTATTTTTGTTCCTCTCTATTGGAATAACA
TTAGGGAAGCTACTGCAGTATAAGGAGGTACACCAAGTAGGGCAGAAATTCCATTGGTAT
GAAGAATTAGTCCGAGTTACCCTAGGTCCTGGTAAAAGAGGTCAGTGGACATGGAAAAAT
TCGCGCGATTCTAGACATATAGTCATGTTTGGGCCTCTGTTTGAGGATCTAAGGGGTCCA
CCAAAGTATATGCTCTCTCAGATTGCAGTAGGAAATCCTAACAAGCATCCTGACAAAGTC
ATTGCAACAGACGATGAGACGGAAGATGCGGAAGCACCTTGCATCCAGAAGGTGTTTGGG
ATTCTAAGAATATACTTCACATTTCTTGAATTTGTGAAGCGTGTTTGTCTTGGAATTGTT
GCTGGTACTTATTTGAAGAATTGGTCTTCAAAATCTCCCATAGTTGTCCTGCTTACCATC
ACTTCTTTCCAGCTATTCTTCATGCTTCTGAAGAAGCCTTTCATTAAAAAAAAGGTTCAG
TTGGTTGAGATCATCTCAGTTGCCTGCGAAACAGGTATTTTCGCTGCTTGTATTGTTCTC
ATAGGAAGAGATTCGTCCAGAAATGAGACAGCAATCGGTATCACCATGCTTGCGCTTTTC
TTCATAGCATTTTTATCTCAGCTTGGAAATGAATGGTATGCATTATACAGACAGACAAAG
AGACTCGGTGCTGAAGACAAGTCTTTCTGCTCTGGTCTGAAAGCAGCATCAATTGGATTC
CTCTTGTTTTTCATTCCTCAAAGATTGATCAGAAAGCTTGAAAGCGGGTCTGCACTGTTA
GATCGTGTACTCAAGGAAACCGGGGATGTTACTTCATCTTGTGACAGGAACCGGAGTTCT
GGTAGTAGAAGCTCAGGTACTGATAGACCATGGCATAAGCAATTCAGAGAACTAGCAAAG
TCCAGCTTTAGTAAAGATAGTAATGTAACTACAAGTGATCCGTCAACAAGTCGTGTCAGA
TGGAGTGGATTTTGGAACCCTAAGAGAAGTGGGAGCTCATCAAAAGATTCATCAGCAGAC
TTCAAGTCAAAACCAAGAGGATTGCACAAAGATTTAGAAGCTATTTTTGCTTCCAAGTCA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400031648
PEP Infomation

pacid=37461515 transcript=PGSC0003DMT400046769 locus=PGSC0003DMG400018158 ID=PGSC0003DMT400046769.v4.03 annot-version=v4.03
Sequence

MGREKLFLWLILHFCVFVVLSYGVRCDGSEVTLKLLTTPREFTNRNFANFAFQVLAGGNG
DICADCSTSCKLDDYVPAVCEGGEVSYTQLLDGNHTFEVCTNGSLGVGCAHYNWTVDTIP
PTAYITTPTSFTNASNVSVDITFTEPCWSQGGFRCASTNSCNLLVYGAGQVVPNTLNVIE
PDLKFSVVVSLSTRDQYGRVILVMDKNFCSDPAGNKFKRTDNSSLFIHFDRRTVFADIRT
HIPERQFQIDSETRTVRATNSTENMEVYLYFNEPISNSSTEILNSLSISQGLLTPISVNS
FGERRFGFQVRGISQTAIVTLSVRSDLILSWQGTSIAPVAPVTFLYDMQRPAVRLSTTSR
MRTCDEQIPVLIKFVKPVFGFNSSHVSISGGQLQSFQEMSRSMYTVNIQARDDFVSVSIP
ENVTGDVAGNMNLQSNILRLKHYTVPAISEALSILATSAFVVTSFAAGLLTVSTASLQSV
GAYSRPSSLMTSDPARNLFRIACHIQFFALTRWLPVTLPVEYYEFARGLQWSVPYFSLPW
EMASMHQFMMGPGSTTDPHSYGSKINDFGMKPGKYNVNKAAALYGLPLSPMEYRSIFGSQ
DLLPEAQYIVDPKYSNGWRDFNRSMFWLAVIGGSLILLHALVLFVLRLRKDREKKWSYGA
LVFPRFEIFLTILAIPCICKASVNVVKGGSSAGIAVGILLLGLVSFLLLALFLFLSIGIT
LGKLLQYKEVHQVGQKFHWYEELVRVTLGPGKRGQWTWKNSRDSRHIVMFGPLFEDLRGP
PKYMLSQIAVGNPNKHPDKVIATDDETEDAEAPCIQKVFGILRIYFTFLEFVKRVCLGIV
AGTYLKNWSSKSPIVVLLTITSFQLFFMLLKKPFIKKKVQLVEIISVACETGIFAACIVL
IGRDSSRNETAIGITMLALFFIAFLSQLGNEWYALYRQTKRLGAEDKSFCSGLKAASIGF
LLFFIPQRLIRKLESGSALLDRVLKETGDVTSSCDRNRSSGSRSSGTDRPWHKQFRELAK
SSFSKDSNVTTSDPSTSRVRWSGFWNPKRSGSSSKDSSADFKSKPRGLHKDLEAIFASKS
*

Transcript Sequence

Transcript ID

PGSC0003DMT400046769
Transcript Infomation

pacid=37461515 locus=PGSC0003DMG400018158 ID=PGSC0003DMT400046769.v4.03 annot-version=v4.03
Sequence

ATGGGTCGAGAAAAATTATTTTTGTGGCTGATTTTGCATTTCTGTGTTTTCGTCGTTTTG
AGTTACGGGGTTCGATGCGATGGCTCAGAGGTCACTTTGAAGTTATTGACTACTCCTCGT
GAATTCACAAACCGGAATTTTGCGAATTTTGCTTTTCAAGTTTTGGCCGGTGGTAATGGT
GACATTTGTGCGGATTGTTCAACTAGTTGTAAGTTGGATGATTATGTGCCTGCAGTTTGT
GAAGGTGGAGAAGTTTCTTACACACAGTTGCTTGATGGAAATCATACTTTTGAAGTTTGC
ACCAATGGATCTCTTGGAGTTGGATGTGCTCACTATAACTGGACTGTTGACACCATCCCG
CCTACAGCCTACATTACCACCCCAACATCTTTTACAAATGCTTCCAATGTTTCAGTGGAC
ATAACTTTCACTGAGCCATGTTGGAGCCAAGGTGGTTTCAGATGTGCTTCCACGAATTCC
TGCAATCTTCTCGTTTATGGAGCTGGACAGGTCGTGCCAAACACACTCAATGTTATTGAG
CCAGACCTCAAATTTTCTGTTGTCGTGAGTCTGTCTACACGTGATCAGTATGGAAGAGTG
ATCTTGGTAATGGATAAAAACTTCTGTTCGGACCCTGCTGGAAACAAATTTAAAAGGACA
GACAATTCAAGTTTATTTATACATTTTGATAGAAGGACAGTGTTCGCTGACATAAGGACT
CATATACCTGAAAGGCAGTTTCAAATTGACAGTGAAACGAGAACCGTGCGAGCAACAAAT
AGTACTGAAAACATGGAGGTGTATTTGTACTTTAATGAACCAATTTCCAACTCATCTACG
GAAATTTTGAATTCCCTGAGCATAAGTCAGGGATTGCTTACTCCCATTAGTGTAAATAGC
TTTGGAGAACGTAGATTTGGATTTCAGGTTAGAGGTATATCACAGACAGCCATAGTGACA
TTGAGCGTAAGATCAGACTTAATATTGAGCTGGCAGGGAACCTCCATTGCTCCTGTAGCT
CCTGTTACTTTTCTATACGATATGCAACGGCCTGCTGTCAGGTTGAGCACAACATCTAGG
ATGAGAACCTGTGACGAGCAAATTCCTGTACTGATAAAGTTCGTTAAGCCAGTGTTTGGC
TTTAATAGTTCTCATGTATCCATATCTGGAGGGCAGTTGCAGAGCTTTCAAGAAATGAGT
AGAAGCATGTACACTGTCAATATACAAGCCAGAGATGATTTTGTTTCTGTGAGCATCCCT
GAAAATGTAACTGGTGATGTTGCTGGAAACATGAACCTACAATCTAATATTCTCCGGCTC
AAGCACTATACTGTACCAGCAATATCTGAAGCGCTTTCCATCTTGGCAACTTCTGCTTTC
GTGGTTACGTCTTTTGCAGCAGGGCTCCTCACAGTTTCAACCGCTAGCCTCCAATCTGTT
GGTGCATACTCAAGACCAAGCTCTTTAATGACATCTGATCCTGCTAGAAATCTTTTTAGA
ATAGCTTGCCACATCCAGTTTTTTGCGTTGACGAGATGGTTGCCAGTTACCTTGCCAGTT
GAATACTATGAATTTGCTAGAGGCCTGCAATGGAGTGTTCCCTACTTCAGTCTCCCATGG
GAAATGGCAAGCATGCATCAATTTATGATGGGACCGGGTTCAACAACAGACCCTCATTCA
TACGGCTCTAAAATCAATGATTTTGGAATGAAGCCAGGCAAATACAATGTTAACAAAGCT
GCAGCATTATATGGGTTGCCACTTAGTCCTATGGAATATAGATCAATCTTCGGGAGCCAG
GATCTTCTTCCGGAAGCTCAGTATATCGTGGATCCAAAATATTCTAATGGGTGGAGGGAT
TTCAACAGAAGCATGTTTTGGTTAGCTGTTATTGGGGGCAGCTTGATATTGTTGCATGCT
TTGGTCCTTTTTGTTTTAAGACTGAGGAAGGACAGAGAAAAAAAGTGGAGCTATGGAGCC
TTGGTTTTTCCAAGATTTGAGATCTTTCTTACAATTCTGGCTATACCTTGCATTTGCAAA
GCCTCAGTAAATGTAGTTAAAGGAGGATCATCTGCAGGAATTGCTGTTGGCATTTTGCTG
TTGGGATTAGTATCATTTCTATTGTTAGCATTATTTTTGTTCCTCTCTATTGGAATAACA
TTAGGGAAGCTACTGCAGTATAAGGAGGTACACCAAGTAGGGCAGAAATTCCATTGGTAT
GAAGAATTAGTCCGAGTTACCCTAGGTCCTGGTAAAAGAGGTCAGTGGACATGGAAAAAT
TCGCGCGATTCTAGACATATAGTCATGTTTGGGCCTCTGTTTGAGGATCTAAGGGGTCCA
CCAAAGTATATGCTCTCTCAGATTGCAGTAGGAAATCCTAACAAGCATCCTGACAAAGTC
ATTGCAACAGACGATGAGACGGAAGATGCGGAAGCACCTTGCATCCAGAAGGTGTTTGGG
ATTCTAAGAATATACTTCACATTTCTTGAATTTGTGAAGCGTGTTTGTCTTGGAATTGTT
GCTGGTACTTATTTGAAGAATTGGTCTTCAAAATCTCCCATAGTTGTCCTGCTTACCATC
ACTTCTTTCCAGCTATTCTTCATGCTTCTGAAGAAGCCTTTCATTAAAAAAAAGGTTCAG
TTGGTTGAGATCATCTCAGTTGCCTGCGAAACAGGTATTTTCGCTGCTTGTATTGTTCTC
ATAGGAAGAGATTCGTCCAGAAATGAGACAGCAATCGGTATCACCATGCTTGCGCTTTTC
TTCATAGCATTTTTATCTCAGCTTGGAAATGAATGGTATGCATTATACAGACAGACAAAG
AGACTCGGTGCTGAAGACAAGTCTTTCTGCTCTGGTCTGAAAGCAGCATCAATTGGATTC
CTCTTGTTTTTCATTCCTCAAAGATTGATCAGAAAGCTTGAAAGCGGGTCTGCACTGTTA
GATCGTGTACTCAAGGAAACCGGGGATGTTACTTCATCTTGTGACAGGAACCGGAGTTCT
GGTAGTAGAAGCTCAGGTACTGATAGACCATGGCATAAGCAATTCAGAGAACTAGCAAAG
TCCAGCTTTAGTAAAGATAGTAATGTAACTACAAGTGATCCGTCAACAAGTCGTGTCAGA
TGGAGTGGATTTTGGAACCCTAAGAGAAGTGGGAGCTCATCAAAAGATTCATCAGCAGAC
TTCAAGTCAAAACCAAGAGGATTGCACAAAGATTTAGAAGCTATTTTTGCTTCCAAGTCA
TAG