Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046725
CDS Infomation

pacid=37459829 polypeptide=PGSC0003DMP400031612 locus=PGSC0003DMG401018143 ID=PGSC0003DMT400046725.v4.03 annot-version=v4.03
Sequence

ATGGAAGTCTCCGGCAAAGATCAATCTTCTGTTACTGCTAATGCTAAGCGATCATCATCA
GCAACGAAGCTTCTTCGATATCCACTGCGATCGGGCACTAAGCCCAAGGAGGAGAAGCCG
CCTCTGACTGATGCTTCCAACTCTTCGGTTCCTAGAAGGGGAAAACCTGCCTCAAGTGTC
AGTAAGAGTATTAGTGTCCTTGATCTTGGCAAGGAAAAGTCTGCTGCTAAACCTCCAAGA
AGGCTGTCTATTCAATCTAAGTCAAGTGCCAGTCCTGCTTCAAGAGCAGTAGGCACTATC
ACTCCTATATCGGAGGCTAGGGCAAAGAGATCCGTGATCAACCAGGGGAAACCTAATACA
CCGCTTTCAGCTCTTGCAAAGTCATCAAATGGAAAGGAAAGCAATCGTCTATTCTCTGCA
CTCTACTGGCTATCCCAGATTAAGCTCTCTGAATCTGCTGCTAAGCATTCAATTTCTCTT
GGGTTTTTCAAACTTGCTTTGGAAGCTGGCTGTGAGCCGCTTCAACGTTTGAGGGATGAG
CTGAAATCCTATGTGCAACGTCATAGCCTTCTAGATCTCGGGGAGCCAGTGAAACAATTG
TTTGAAAGCTACAATATTTCTCACGATTTTGAGCAGTTGCAAGTATCTGAGACTTGTTCC
CATGCACCTCAAGATGGGACACCTTCATCTGATGATGAAGTGCACAGCTCTTCATCTGTT
GCTGGCACTGAGAAATCAGAACCTGAAGTCGTGACCAAAGATGCTATTGAAACTTGGCAA
GTGGCAGAACCAACTAAAGAGACTTCATCAAGGAAAGACATTGCAACGAAGAACCATAAA
TCTGTAAGTAAGATTGCTACAACTCCAAACTCTACAGAGGTTGCTGCAACTCCAAAATCT
ACAGAGGTTTCTGGTACCATAAAAAAGAAGCTTGAAAATCCTAAGCAAAAACCAAATAAG
AATAAGGTGAAAAGACAGGGAAAGAAATCTGCTGGAGTAGAAGGTCCTGCTAATGCTGGC
ACTGCTGAGATAGCCCTTCCAGAAGACAAAGAGAATATGGATGCTCCACAGTCGGAAGTT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400031612
PEP Infomation

pacid=37459829 transcript=PGSC0003DMT400046725 locus=PGSC0003DMG401018143 ID=PGSC0003DMT400046725.v4.03 annot-version=v4.03
Sequence

MEVSGKDQSSVTANAKRSSSATKLLRYPLRSGTKPKEEKPPLTDASNSSVPRRGKPASSV
SKSISVLDLGKEKSAAKPPRRLSIQSKSSASPASRAVGTITPISEARAKRSVINQGKPNT
PLSALAKSSNGKESNRLFSALYWLSQIKLSESAAKHSISLGFFKLALEAGCEPLQRLRDE
LKSYVQRHSLLDLGEPVKQLFESYNISHDFEQLQVSETCSHAPQDGTPSSDDEVHSSSSV
AGTEKSEPEVVTKDAIETWQVAEPTKETSSRKDIATKNHKSVSKIATTPNSTEVAATPKS
TEVSGTIKKKLENPKQKPNKNKVKRQGKKSAGVEGPANAGTAEIALPEDKENMDAPQSEV
*

Transcript Sequence

Transcript ID

PGSC0003DMT400046725
Transcript Infomation

pacid=37459829 locus=PGSC0003DMG401018143 ID=PGSC0003DMT400046725.v4.03 annot-version=v4.03
Sequence

ATGGAAGTCTCCGGCAAAGATCAATCTTCTGTTACTGCTAATGCTAAGCGATCATCATCA
GCAACGAAGCTTCTTCGATATCCACTGCGATCGGGCACTAAGCCCAAGGAGGAGAAGCCG
CCTCTGACTGATGCTTCCAACTCTTCGGTTCCTAGAAGGGGAAAACCTGCCTCAAGTGTC
AGTAAGAGTATTAGTGTCCTTGATCTTGGCAAGGAAAAGTCTGCTGCTAAACCTCCAAGA
AGGCTGTCTATTCAATCTAAGTCAAGTGCCAGTCCTGCTTCAAGAGCAGTAGGCACTATC
ACTCCTATATCGGAGGCTAGGGCAAAGAGATCCGTGATCAACCAGGGGAAACCTAATACA
CCGCTTTCAGCTCTTGCAAAGTCATCAAATGGAAAGGAAAGCAATCGTCTATTCTCTGCA
CTCTACTGGCTATCCCAGATTAAGCTCTCTGAATCTGCTGCTAAGCATTCAATTTCTCTT
GGGTTTTTCAAACTTGCTTTGGAAGCTGGCTGTGAGCCGCTTCAACGTTTGAGGGATGAG
CTGAAATCCTATGTGCAACGTCATAGCCTTCTAGATCTCGGGGAGCCAGTGAAACAATTG
TTTGAAAGCTACAATATTTCTCACGATTTTGAGCAGTTGCAAGTATCTGAGACTTGTTCC
CATGCACCTCAAGATGGGACACCTTCATCTGATGATGAAGTGCACAGCTCTTCATCTGTT
GCTGGCACTGAGAAATCAGAACCTGAAGTCGTGACCAAAGATGCTATTGAAACTTGGCAA
GTGGCAGAACCAACTAAAGAGACTTCATCAAGGAAAGACATTGCAACGAAGAACCATAAA
TCTGTAAGTAAGATTGCTACAACTCCAAACTCTACAGAGGTTGCTGCAACTCCAAAATCT
ACAGAGGTTTCTGGTACCATAAAAAAGAAGCTTGAAAATCCTAAGCAAAAACCAAATAAG
AATAAGGTGAAAAGACAGGGAAAGAAATCTGCTGGAGTAGAAGGTCCTGCTAATGCTGGC
ACTGCTGAGATAGCCCTTCCAGAAGACAAAGAGAATATGGATGCTCCACAGTCGGAAGTT
TAA