Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046721
CDS Infomation

pacid=37461245 polypeptide=PGSC0003DMP400031608 locus=PGSC0003DMG400018140 ID=PGSC0003DMT400046721.v4.03 annot-version=v4.03
Sequence

ATGGAGTTCCCTTGGTATTCTGTCATTGTTCCTCTGTTTGTTTTCATTTTCTTTCTTCAA
AGGTTCTTCTTTACTACTTCCAATAATAACAAAAAATTACCACCATCTCCAAGAAAGCTC
CCAATCATAGGGAATTTGCACCAACTTGGGTCGCATCCTCACCGTTCTCTCCATAAATTA
TCCAAAAAATATGGTCCAGTCATGCTACTTCACTTGGGCAGCAAACCAGTGCTCGTTGCT
TCCTCTGTTGATGCTGCTCGCGATATCATGAAAACACACGATCTTGTATGGTCAAGCAGA
CCTAAATCAAGCATCGCTGATGGACTTCTTTATGGCTCCACAGACGTGCCATTTAGTCCC
TATGGTGAATATTGGAGACAAATTAGAAGCATCGCCGTGCTTCACCTGCTCAGCAACAAA
AGAGTCCAATCTTATCGTGATATCAGAGAAGAAGAAACATCGAACATGATTGAAAAAATC
AGGCAAGGTGGTGATTCTTCGAATTCAGTGATAGATATGAGAGATGTTTTAAGTTGTATG
ACGAATAACATAATCAGCAGAGTGACCACAGGAAGGACATCCAATGGAGGGGACAGTGGA
ATACCTGTTAAGGCTCTTCTAGAAGAGCTTCTTATACTTTTAGGTATATTTAGCATTGGA
GATTATATTCCATGGCTTAAATGGGTCGATAAAATGAACGGTTTGGACAGTAGAGTGAAG
AAAGTAGCTAAAGATTTGGATGCATTTCTAGAGAGCGCGATTGAAGAAGGCGTGATTAGG
AACAAGAAAGCAGAGTGCAGTGCGGGTGAAGCTAAAGATTTCGTGGGCGTTTTGCTGGAA
ATTCAGGATGGAAAGGAGACTGGTTTTCCTCTTCAAAGAGATTCACTGAAAGCTATCCTT
TTGGACTCATTTACTGCTGGTACGGATTCAATATATACAACTTTAGAGTGGATAATGACA
GAGTTTTTGATGCATCCAAGAGCCATGGAAACATTACAGAATGAAGTGCGAGGATTAGCC
CAAGGAAAAGCAGAGGTAACAGAGGATGACTTAGGAAATATGCAGTATCTTAAAGCAGTG
ATCAAAGAGACACTTCGGCTTCATCCACCGTTTCCACTACTAGTTCCTCATGAATCAATG
GAAGACGTAAAATTACTAGACTATCACATACCTGCTAAAACTCAAGTCCTTATTAATGCC
TGGGCAATTGGAAGAGATGCATTGTCGTGGGATGATCCAGAGGAGTACCAACCTGAGAGA
TTCTTGAATAGTGATATTGATTTCAGAGGACTAAACTTTGAGTTGATTCCATTCGGAGCT
GGCAGAAGGGGTTGCCCAGGAATTACTTTTGCTATCATGGTAATTGAGGTAGCATTAGCA
AAGATTGTGCACAAGTTCAATTTCGCGTTACCAAAAGAAGAAGATTTGGACATGACTGAA
TGCACTGGCATCACTATTCGAAGAAAATCACATTTACTAGCAGTGGCAACTCCATGCTCT
ACTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400031608
PEP Infomation

pacid=37461245 transcript=PGSC0003DMT400046721 locus=PGSC0003DMG400018140 ID=PGSC0003DMT400046721.v4.03 annot-version=v4.03
Sequence

MEFPWYSVIVPLFVFIFFLQRFFFTTSNNNKKLPPSPRKLPIIGNLHQLGSHPHRSLHKL
SKKYGPVMLLHLGSKPVLVASSVDAARDIMKTHDLVWSSRPKSSIADGLLYGSTDVPFSP
YGEYWRQIRSIAVLHLLSNKRVQSYRDIREEETSNMIEKIRQGGDSSNSVIDMRDVLSCM
TNNIISRVTTGRTSNGGDSGIPVKALLEELLILLGIFSIGDYIPWLKWVDKMNGLDSRVK
KVAKDLDAFLESAIEEGVIRNKKAECSAGEAKDFVGVLLEIQDGKETGFPLQRDSLKAIL
LDSFTAGTDSIYTTLEWIMTEFLMHPRAMETLQNEVRGLAQGKAEVTEDDLGNMQYLKAV
IKETLRLHPPFPLLVPHESMEDVKLLDYHIPAKTQVLINAWAIGRDALSWDDPEEYQPER
FLNSDIDFRGLNFELIPFGAGRRGCPGITFAIMVIEVALAKIVHKFNFALPKEEDLDMTE
CTGITIRRKSHLLAVATPCST*

Transcript Sequence

Transcript ID

PGSC0003DMT400046721
Transcript Infomation

pacid=37461245 locus=PGSC0003DMG400018140 ID=PGSC0003DMT400046721.v4.03 annot-version=v4.03
Sequence

ATGGAGTTCCCTTGGTATTCTGTCATTGTTCCTCTGTTTGTTTTCATTTTCTTTCTTCAA
AGGTTCTTCTTTACTACTTCCAATAATAACAAAAAATTACCACCATCTCCAAGAAAGCTC
CCAATCATAGGGAATTTGCACCAACTTGGGTCGCATCCTCACCGTTCTCTCCATAAATTA
TCCAAAAAATATGGTCCAGTCATGCTACTTCACTTGGGCAGCAAACCAGTGCTCGTTGCT
TCCTCTGTTGATGCTGCTCGCGATATCATGAAAACACACGATCTTGTATGGTCAAGCAGA
CCTAAATCAAGCATCGCTGATGGACTTCTTTATGGCTCCACAGACGTGCCATTTAGTCCC
TATGGTGAATATTGGAGACAAATTAGAAGCATCGCCGTGCTTCACCTGCTCAGCAACAAA
AGAGTCCAATCTTATCGTGATATCAGAGAAGAAGAAACATCGAACATGATTGAAAAAATC
AGGCAAGGTGGTGATTCTTCGAATTCAGTGATAGATATGAGAGATGTTTTAAGTTGTATG
ACGAATAACATAATCAGCAGAGTGACCACAGGAAGGACATCCAATGGAGGGGACAGTGGA
ATACCTGTTAAGGCTCTTCTAGAAGAGCTTCTTATACTTTTAGGTATATTTAGCATTGGA
GATTATATTCCATGGCTTAAATGGGTCGATAAAATGAACGGTTTGGACAGTAGAGTGAAG
AAAGTAGCTAAAGATTTGGATGCATTTCTAGAGAGCGCGATTGAAGAAGGCGTGATTAGG
AACAAGAAAGCAGAGTGCAGTGCGGGTGAAGCTAAAGATTTCGTGGGCGTTTTGCTGGAA
ATTCAGGATGGAAAGGAGACTGGTTTTCCTCTTCAAAGAGATTCACTGAAAGCTATCCTT
TTGGACTCATTTACTGCTGGTACGGATTCAATATATACAACTTTAGAGTGGATAATGACA
GAGTTTTTGATGCATCCAAGAGCCATGGAAACATTACAGAATGAAGTGCGAGGATTAGCC
CAAGGAAAAGCAGAGGTAACAGAGGATGACTTAGGAAATATGCAGTATCTTAAAGCAGTG
ATCAAAGAGACACTTCGGCTTCATCCACCGTTTCCACTACTAGTTCCTCATGAATCAATG
GAAGACGTAAAATTACTAGACTATCACATACCTGCTAAAACTCAAGTCCTTATTAATGCC
TGGGCAATTGGAAGAGATGCATTGTCGTGGGATGATCCAGAGGAGTACCAACCTGAGAGA
TTCTTGAATAGTGATATTGATTTCAGAGGACTAAACTTTGAGTTGATTCCATTCGGAGCT
GGCAGAAGGGGTTGCCCAGGAATTACTTTTGCTATCATGGTAATTGAGGTAGCATTAGCA
AAGATTGTGCACAAGTTCAATTTCGCGTTACCAAAAGAAGAAGATTTGGACATGACTGAA
TGCACTGGCATCACTATTCGAAGAAAATCACATTTACTAGCAGTGGCAACTCCATGCTCT
ACTTAG