Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046718
CDS Infomation

pacid=37459314 polypeptide=PGSC0003DMP400031606 locus=PGSC0003DMG400018138 ID=PGSC0003DMT400046718.v4.03 annot-version=v4.03
Sequence

ATGGAGTTCCCTTGGTATTCTGTTGTTGTTCCTCTGTTTGTCTTCATTTTTTTTCTTCAT
AACTGCTTATTTACCACTTTTAATAATACTAACAAAAAATTACCACCATCTCCAAGAAAG
CTCCCAATCATAGGAAATTTGCATCAACTTGGGTTGCATCCTCACCGTTCTCTCCATGAA
CTATCAAAAAGATATGGTGCAGTCATGCTACTTCACTTGGGCAGTAAGCCAGTTCTTGTT
GCTTCCTCTGTCGATGTTGTTCGCGATATCTTGAAAACTCATGATCTCGTATGGTCAACC
AGACCAAAATCTAGCATCGCTGATGGACTCCTTTATGGATCCAAAGGCGTGGCCTTTAGT
AATTATAGTGAATACTGGAGACAAATTAGAAGTGTCATGGTGCTTCAGCTTCTCAGCAAC
AAAAGTGTCCAATCTTATCGTCATGTGAGAGAAGAAGAAACATCAAACATGATTGATAAA
ATTAGGCAACAGTGTGATTCAGTGATGGACTTGAGAGATGTTTTAAGTTGTATGACTAAT
AATATAATCAACCGAGTGACCATAGGAAGGACATACAATGAAGGGGAAACTGGAATAGCT
GTTAAGGCTCTCTTACAAGAACTTCTTGCACTTTTAGGTACTTTTAACATTGGTGAGTAT
ATTCCGTGGCTTAAATGGGTCGATAAAATTAATGGTCTTGACAACAGAGTGAAGAAAGTA
GCTAAAGATTTGGATGCATTTCTAGACAGCGTGATTGAAGAACGTGTGATTAGAAACAAC
AAAGGAGAATATAGTGCGGGTGAAGCTAAAGATTTCGTGGATGTTTTGCTGGAAATTCAG
AATGGAAACGAAACCGGCTTTCCTCTTCAAAGGGATTCATTGAAAGCTATTCTCTTGGAC
TCGTTTATTGCTGGTGTGGATTCAATATATACAACTTTAGAGTGGATAATGATAGAGCTT
TTGAGGAATCCAAGAGCCATGGAAAAATTACAGAATGAAGTGAGAGGATTAGCCCAAGGG
AAAGCAGAGATAACAGAGGACGACTTAGGAAATATGCAATATCTGAAAGCAGTGATCAAA
GAGACTCTCAGGCTTAATCCACCGTTTCCATTACCAGTTCCTCGAGAATCAATGGAAGAC
GTAAAATTACTGGACTATGACATACCTGCTAAAACTCAAGTCCTTATTAATGTTTGGGCA
ATGGGAAGAGACCCATTGTCATGGGATGATCCAGAGGAATACCGACCTGAGAGATTCTTG
AATAGTGATATTGATTTCAGAGGACTAAACTTTGAGTTGATTCCATTCGGAGCTGGCAGG
AGGGGTTGCCCAGGTATTCCTTTTGCTATTGTGATAATTGAGCTAGCATTAGCAAGGCTT
GTGCACAAATTCAATTTTGCATTACCACAAGGAATAAAAAAGGAGGATTTGGATATGAGT
GAATGCACTGGCATCTCCATTCGCAGGAAATTGCCTTTACTAGCAGTGGCAACTCCGTGC
GGTATTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400031606
PEP Infomation

pacid=37459314 transcript=PGSC0003DMT400046718 locus=PGSC0003DMG400018138 ID=PGSC0003DMT400046718.v4.03 annot-version=v4.03
Sequence

MEFPWYSVVVPLFVFIFFLHNCLFTTFNNTNKKLPPSPRKLPIIGNLHQLGLHPHRSLHE
LSKRYGAVMLLHLGSKPVLVASSVDVVRDILKTHDLVWSTRPKSSIADGLLYGSKGVAFS
NYSEYWRQIRSVMVLQLLSNKSVQSYRHVREEETSNMIDKIRQQCDSVMDLRDVLSCMTN
NIINRVTIGRTYNEGETGIAVKALLQELLALLGTFNIGEYIPWLKWVDKINGLDNRVKKV
AKDLDAFLDSVIEERVIRNNKGEYSAGEAKDFVDVLLEIQNGNETGFPLQRDSLKAILLD
SFIAGVDSIYTTLEWIMIELLRNPRAMEKLQNEVRGLAQGKAEITEDDLGNMQYLKAVIK
ETLRLNPPFPLPVPRESMEDVKLLDYDIPAKTQVLINVWAMGRDPLSWDDPEEYRPERFL
NSDIDFRGLNFELIPFGAGRRGCPGIPFAIVIIELALARLVHKFNFALPQGIKKEDLDMS
ECTGISIRRKLPLLAVATPCGI*

Transcript Sequence

Transcript ID

PGSC0003DMT400046718
Transcript Infomation

pacid=37459314 locus=PGSC0003DMG400018138 ID=PGSC0003DMT400046718.v4.03 annot-version=v4.03
Sequence

ATGGAGTTCCCTTGGTATTCTGTTGTTGTTCCTCTGTTTGTCTTCATTTTTTTTCTTCAT
AACTGCTTATTTACCACTTTTAATAATACTAACAAAAAATTACCACCATCTCCAAGAAAG
CTCCCAATCATAGGAAATTTGCATCAACTTGGGTTGCATCCTCACCGTTCTCTCCATGAA
CTATCAAAAAGATATGGTGCAGTCATGCTACTTCACTTGGGCAGTAAGCCAGTTCTTGTT
GCTTCCTCTGTCGATGTTGTTCGCGATATCTTGAAAACTCATGATCTCGTATGGTCAACC
AGACCAAAATCTAGCATCGCTGATGGACTCCTTTATGGATCCAAAGGCGTGGCCTTTAGT
AATTATAGTGAATACTGGAGACAAATTAGAAGTGTCATGGTGCTTCAGCTTCTCAGCAAC
AAAAGTGTCCAATCTTATCGTCATGTGAGAGAAGAAGAAACATCAAACATGATTGATAAA
ATTAGGCAACAGTGTGATTCAGTGATGGACTTGAGAGATGTTTTAAGTTGTATGACTAAT
AATATAATCAACCGAGTGACCATAGGAAGGACATACAATGAAGGGGAAACTGGAATAGCT
GTTAAGGCTCTCTTACAAGAACTTCTTGCACTTTTAGGTACTTTTAACATTGGTGAGTAT
ATTCCGTGGCTTAAATGGGTCGATAAAATTAATGGTCTTGACAACAGAGTGAAGAAAGTA
GCTAAAGATTTGGATGCATTTCTAGACAGCGTGATTGAAGAACGTGTGATTAGAAACAAC
AAAGGAGAATATAGTGCGGGTGAAGCTAAAGATTTCGTGGATGTTTTGCTGGAAATTCAG
AATGGAAACGAAACCGGCTTTCCTCTTCAAAGGGATTCATTGAAAGCTATTCTCTTGGAC
TCGTTTATTGCTGGTGTGGATTCAATATATACAACTTTAGAGTGGATAATGATAGAGCTT
TTGAGGAATCCAAGAGCCATGGAAAAATTACAGAATGAAGTGAGAGGATTAGCCCAAGGG
AAAGCAGAGATAACAGAGGACGACTTAGGAAATATGCAATATCTGAAAGCAGTGATCAAA
GAGACTCTCAGGCTTAATCCACCGTTTCCATTACCAGTTCCTCGAGAATCAATGGAAGAC
GTAAAATTACTGGACTATGACATACCTGCTAAAACTCAAGTCCTTATTAATGTTTGGGCA
ATGGGAAGAGACCCATTGTCATGGGATGATCCAGAGGAATACCGACCTGAGAGATTCTTG
AATAGTGATATTGATTTCAGAGGACTAAACTTTGAGTTGATTCCATTCGGAGCTGGCAGG
AGGGGTTGCCCAGGTATTCCTTTTGCTATTGTGATAATTGAGCTAGCATTAGCAAGGCTT
GTGCACAAATTCAATTTTGCATTACCACAAGGAATAAAAAAGGAGGATTTGGATATGAGT
GAATGCACTGGCATCTCCATTCGCAGGAAATTGCCTTTACTAGCAGTGGCAACTCCGTGC
GGTATTTAG