Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046711
CDS Infomation

pacid=37463306 polypeptide=PGSC0003DMP400031600 locus=PGSC0003DMG400018135 ID=PGSC0003DMT400046711.v4.03 annot-version=v4.03
Sequence

ATGGATCTTACCTGGTATTCTCTTCTAATTCCTCTGTTTTTCTTTCTTCATAAGTGCTTC
TTTTCTACTTCAAATAAGTTACCACCATCTCCAACAAAGCTTCCTATCATAGGAAATCTC
CATCAACTTGGATCTCTTCCTCACCGTTCTCTCCATAAACTATCCAAAAAATATGGTCCA
GTCATGCTACTTCACTTTGGCAGTAAGCCTGTGCTCGTTGCTTCCTCTGTCGAAGCTGCT
CGTGACATCATGAAAACTCATGATCTCGTATGCTCAAGCAGACCTAAATCTAGCATGGCT
GATAGACTCTTTTACGGCTCTAAGGACGTGGGCTTTAGTCCCTATGGTGAATACTGGAGA
CAAATTAAAAGCATTGCCATGCTTCACCTTCTCAGCAACAAAAGAGTCCGATCTTACCGT
GATATTAGAGAAGAAGAAACATCGAATATGATTGAAAAAATCACACAAGAGTGTGTTTCT
TCAAATTCAGTGATAGATTTAAGAGATCATGTTTGTTTTATGACTGGTAACATAATTAGC
AGAGTGGCGTTAGGGAGGATATATAATGAAAGGGAAAGTGGAATAGATGCAAAGGCCATC
CTAGCAGAATTTGTTCAACTTTTGGGTACTTTTAACGTTGGGGATTTTATTCCTTGGCTG
GAATGGGTAAATAAAATCACTGGTTTAGACACCAAAGTGGAGAAAGTAGCTCAAAAATTG
AATACATTTTTAGAGAGTGTGATCGAGGAACACATTATTAGGAACAATAAAGAAGAATAC
AGTACCGGCGAAGCTAAAGATTTCGTGGATGTTTTGCTGGAAATTCAGAATGGAAAGGAA
ACCGGCTTTCCTCTTCAAAGGGATTCATTGAAAGCTATCCTCTTGGATATATTTGCTGCT
GGTACGGATACAACATATACAACTCTAGAGTGGATAATGGCAGAGCTTTTGAGACATCCA
AGAGCCATGGAAACATTACAGAAAGAAGTGCGAGTATTAGCACAAGGGAAAGCAGAGATA
ACAGAGGATGACTTAGGAAATATGCACTATCTTAAAGCAGTAATCAAAGAGACACTTAGG
CTTCATCCACCCGCTCCTCTACTAATTCCTCGAGAATCAACGGAAGACATAAAATTACTT
GGCTATCAAATACCTGCTAAAACCCAAGTCATTATCAATGCTTGGACAGTCGGAAGAGAT
CCTTTATCATGGGAAAATCCAGAGGACTACCGACCAGAGAGATTCTTAAATAGTGATATT
GATTTCGAAGGATTAAACTTTGAGTTGATTCCATTTGGAGCAGGCAGAAGGGGCTGCCCA
GGAACTGCTTTTGCTGTTGTGATAAATGAGCTAGCATTAGCAAGGCTTATGCACAAGTTC
AATTTTTCATTACCAGAAGGGTTAAAACCGGAGGATTTGGATATGACCGAAGACAATGGC
ATCACTATTCATAGGAAATCACCTCTGCTAGCAGTGACCACTCCATGCTCTAGTTATTAT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400031600
PEP Infomation

pacid=37463306 transcript=PGSC0003DMT400046711 locus=PGSC0003DMG400018135 ID=PGSC0003DMT400046711.v4.03 annot-version=v4.03
Sequence

MDLTWYSLLIPLFFFLHKCFFSTSNKLPPSPTKLPIIGNLHQLGSLPHRSLHKLSKKYGP
VMLLHFGSKPVLVASSVEAARDIMKTHDLVCSSRPKSSMADRLFYGSKDVGFSPYGEYWR
QIKSIAMLHLLSNKRVRSYRDIREEETSNMIEKITQECVSSNSVIDLRDHVCFMTGNIIS
RVALGRIYNERESGIDAKAILAEFVQLLGTFNVGDFIPWLEWVNKITGLDTKVEKVAQKL
NTFLESVIEEHIIRNNKEEYSTGEAKDFVDVLLEIQNGKETGFPLQRDSLKAILLDIFAA
GTDTTYTTLEWIMAELLRHPRAMETLQKEVRVLAQGKAEITEDDLGNMHYLKAVIKETLR
LHPPAPLLIPRESTEDIKLLGYQIPAKTQVIINAWTVGRDPLSWENPEDYRPERFLNSDI
DFEGLNFELIPFGAGRRGCPGTAFAVVINELALARLMHKFNFSLPEGLKPEDLDMTEDNG
ITIHRKSPLLAVTTPCSSYY*

Transcript Sequence

Transcript ID

PGSC0003DMT400046711
Transcript Infomation

pacid=37463306 locus=PGSC0003DMG400018135 ID=PGSC0003DMT400046711.v4.03 annot-version=v4.03
Sequence

ATGGATCTTACCTGGTATTCTCTTCTAATTCCTCTGTTTTTCTTTCTTCATAAGTGCTTC
TTTTCTACTTCAAATAAGTTACCACCATCTCCAACAAAGCTTCCTATCATAGGAAATCTC
CATCAACTTGGATCTCTTCCTCACCGTTCTCTCCATAAACTATCCAAAAAATATGGTCCA
GTCATGCTACTTCACTTTGGCAGTAAGCCTGTGCTCGTTGCTTCCTCTGTCGAAGCTGCT
CGTGACATCATGAAAACTCATGATCTCGTATGCTCAAGCAGACCTAAATCTAGCATGGCT
GATAGACTCTTTTACGGCTCTAAGGACGTGGGCTTTAGTCCCTATGGTGAATACTGGAGA
CAAATTAAAAGCATTGCCATGCTTCACCTTCTCAGCAACAAAAGAGTCCGATCTTACCGT
GATATTAGAGAAGAAGAAACATCGAATATGATTGAAAAAATCACACAAGAGTGTGTTTCT
TCAAATTCAGTGATAGATTTAAGAGATCATGTTTGTTTTATGACTGGTAACATAATTAGC
AGAGTGGCGTTAGGGAGGATATATAATGAAAGGGAAAGTGGAATAGATGCAAAGGCCATC
CTAGCAGAATTTGTTCAACTTTTGGGTACTTTTAACGTTGGGGATTTTATTCCTTGGCTG
GAATGGGTAAATAAAATCACTGGTTTAGACACCAAAGTGGAGAAAGTAGCTCAAAAATTG
AATACATTTTTAGAGAGTGTGATCGAGGAACACATTATTAGGAACAATAAAGAAGAATAC
AGTACCGGCGAAGCTAAAGATTTCGTGGATGTTTTGCTGGAAATTCAGAATGGAAAGGAA
ACCGGCTTTCCTCTTCAAAGGGATTCATTGAAAGCTATCCTCTTGGATATATTTGCTGCT
GGTACGGATACAACATATACAACTCTAGAGTGGATAATGGCAGAGCTTTTGAGACATCCA
AGAGCCATGGAAACATTACAGAAAGAAGTGCGAGTATTAGCACAAGGGAAAGCAGAGATA
ACAGAGGATGACTTAGGAAATATGCACTATCTTAAAGCAGTAATCAAAGAGACACTTAGG
CTTCATCCACCCGCTCCTCTACTAATTCCTCGAGAATCAACGGAAGACATAAAATTACTT
GGCTATCAAATACCTGCTAAAACCCAAGTCATTATCAATGCTTGGACAGTCGGAAGAGAT
CCTTTATCATGGGAAAATCCAGAGGACTACCGACCAGAGAGATTCTTAAATAGTGATATT
GATTTCGAAGGATTAAACTTTGAGTTGATTCCATTTGGAGCAGGCAGAAGGGGCTGCCCA
GGAACTGCTTTTGCTGTTGTGATAAATGAGCTAGCATTAGCAAGGCTTATGCACAAGTTC
AATTTTTCATTACCAGAAGGGTTAAAACCGGAGGATTTGGATATGACCGAAGACAATGGC
ATCACTATTCATAGGAAATCACCTCTGCTAGCAGTGACCACTCCATGCTCTAGTTATTAT
TAG