Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046670
CDS Infomation

pacid=37460814 polypeptide=PGSC0003DMP400031572 locus=PGSC0003DMG400018122 ID=PGSC0003DMT400046670.v4.03 annot-version=v4.03
Sequence

ATGGCTATGGAGTCATCTATTGTGATCAAGGTCAAGTATGAAGAGACACTCAGACGGTTC
AATGCTTGTGTCATCAATGAGAAACTTGATCTAGACATTGGTGGATTGAGAGACAAGATT
ATTCAACTTTTCAATTTCGCTCATGATGCTGAACTCACACTAACATATATCGATGAGGAT
GGGGATGTAGTCACACTTGTTGATGATGAGGATCTGCAGGATGTTATGAGGCAGGACCTG
AATCCCTTGAGAATATCTGCGAGGTTGAATGCTGGCGAAAGAAGCGGCAGAGCTTCAGCT
AGATCTAGTGGAAATTCTACCCCTTTACGATCACCTCGGGTCCAGCCTCCATTCCTAAAC
TTGAATTCCCGTGTTTCTGACGTTCTCAAGTACATTCCAGAACCTCTGCGTGAATCTGTG
ATGAAGGTCTGTTCTGATATGACTGCATCGGCCTCATCCTCTGCTCCCATCCTTGCTGAG
CTTGTTGATGCTATGTCTGAGATGGGGCTATCTTACTACCAAAATCAGGCTTCAGGGTCT
CAGGCTGTCAAAGAAGCTGGCTCCTGTAGTGGCATATCTAAAGGAAATACTAAGAGTGCT
GATGGGGGAATGCCAAATGTCAAAATTGGAGAGTCATCCCCAAAGAAGAATAGGCCTCTC
ACAGCATTACATGGTGAACCAAAACCTAACGCCTCCAATGAAGCTGTAGATGCCTCAGTC
AAGCTAGTATGTAAATCAGAAACTTTGGAAGGTGATCGAACCGAAGATCTGTCATCATCA
TTCAAAGGTTCTAAAGCTCAGACTTCGCTGGTAAACAGTTTGGAGAAGGATAAGAAATTT
GATGTTCGCAGTCTTGACGGAAGGACTATTGGCTATGCATATGTGAGAAACTCACCTATT
CCACCAGAAAAGACTTCTGATGAGCAGCCCAGCAAGGGACATCCAGTAGCTAAACCGGTT
GATTTGGGTGGCTCTGCAAGTTCCAGTAAAGTGAAACAATGCAACTGGGATTCCCCTAAT
GCAGATTCCAGTGGCAGTTCAATCAACATGCCTTATGATGGCTTTACTCCTTCAGGTCTA
GTTCATCTGAACACTGTAAATGTTAATGATTCCCATAATGCAGGTTCTAGTGGCAGTTCA
ATGAAGATGCCGTATGATGGCTTCAGACCTGCTGTACGTCATCTAGGTCCACTGATTCCT
GTGAATGCGTGTCCGTTTTCTGGGGTGCCAACAGTAAATAACCCTATTCCACCTCAAAAC
TTCTCTTTTGAGGTCCCACTTAAAAGGAGCCATAATCACAGTGATGGGACTGGGACTATT
TTCCATAAAGGTGTTCGCTGTGATGGTTGTGGGGTTCATCCGATAACTGGACCTAGGTTC
ATATCTAAAGTGAAGGAGAACTACGATCTCTGCAGCATATGTTTTGCTGAAATGGGAAAT
GATGCTGATTACATCAGAATGGATCGTCCTCTAACTTACCCGAATCCCTGGTCTTTCAAG
AGTTTACATGATCTGCATGGAAGGTTGCGTCCCCGTCCCCCAACTGTCCCACAAGTCATT
CGAGGCTTTGGGTTGAAAGCAGGTCGGCCGAAGCTGGACAGCCGCTTCATACAGGATGTC
AATGTCCTGGATGGAACCATCATGGCCCCCTTGACTCGATTTACCAAGATCTGGAGAATG
AAGAACAATGGTAATCTCGTTTGGCCTCAAGGAACTCAACTTGTTTGGATTGGCGGTGAT
AAATTAAGTGATAGATTCTCTGTTGAATTAGAGATAACTACAGCTGGCTTGGCTGTTGAC
CAGGAGCTTGATGTGGCGGTTGATTTTACTGCTCCTGAGCATCCTGGCAGGTACATATCC
TACTGGAGGTTGGCTTCGGCTTCAGGACAGAAATTTGGCCAGCGTGTATGGGTGCTTATC
CAGGTCGATGCTTTATTAAGCGTGCCAAAAAAGGGGTTGGTCCATGAAGCTTTTCAGGGG
TTAAACTTGAATTTACCTCCTGCCGGCAGTGGTGTGTCTGGACCTGATATTATAAATGTG
AATTCAGAACCTCAGAATGTCCTTCCTGAGCCTAAGAGCTCCAGCACAATGGAGTTGGTT
GATTCAGTGGCTGAAGTAAACCAAAACAAGGAGCAGGAGGCCAAGTTTCCAATTAATGAT
AGCTTGTTGGTTGGTTTTGGTGACAAGTCAAGTTCTCCATCTGCTTCTGGTTCACCAATT
TCATATCCAGTTATTGATTTAACTGAGAAACCATCAGCGGACTCTTCCATGCAACCATCA
GCTGCTGTAGCTATGCAGGCACCGCTCCAGGATGCTAGAGGAAATTTCGAAGTTGAGATG
TCTCTCCTCCAGGAGTTGGAGGAAATGGGTTTCAAGCAGGTAGATCTGAACAAAGAGATC
TTGAGGAAGAATGAGTATGATTTGGAGCAGTCAGTTGATGATCTCTGTGGTGTTGCTGAG
TGGGATCCTATCCTTGAAGAGCTGAAGGAGATGGGTTTTTGTGACAAGGAAATGAACAAG
AAGCTGCTGAAGAAGAACAACGGAAGCATCAAGCGTGTTGTGATGGATCTTATTGCTGGA
GAGCAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400031572
PEP Infomation

pacid=37460814 transcript=PGSC0003DMT400046670 locus=PGSC0003DMG400018122 ID=PGSC0003DMT400046670.v4.03 annot-version=v4.03
Sequence

MAMESSIVIKVKYEETLRRFNACVINEKLDLDIGGLRDKIIQLFNFAHDAELTLTYIDED
GDVVTLVDDEDLQDVMRQDLNPLRISARLNAGERSGRASARSSGNSTPLRSPRVQPPFLN
LNSRVSDVLKYIPEPLRESVMKVCSDMTASASSSAPILAELVDAMSEMGLSYYQNQASGS
QAVKEAGSCSGISKGNTKSADGGMPNVKIGESSPKKNRPLTALHGEPKPNASNEAVDASV
KLVCKSETLEGDRTEDLSSSFKGSKAQTSLVNSLEKDKKFDVRSLDGRTIGYAYVRNSPI
PPEKTSDEQPSKGHPVAKPVDLGGSASSSKVKQCNWDSPNADSSGSSINMPYDGFTPSGL
VHLNTVNVNDSHNAGSSGSSMKMPYDGFRPAVRHLGPLIPVNACPFSGVPTVNNPIPPQN
FSFEVPLKRSHNHSDGTGTIFHKGVRCDGCGVHPITGPRFISKVKENYDLCSICFAEMGN
DADYIRMDRPLTYPNPWSFKSLHDLHGRLRPRPPTVPQVIRGFGLKAGRPKLDSRFIQDV
NVLDGTIMAPLTRFTKIWRMKNNGNLVWPQGTQLVWIGGDKLSDRFSVELEITTAGLAVD
QELDVAVDFTAPEHPGRYISYWRLASASGQKFGQRVWVLIQVDALLSVPKKGLVHEAFQG
LNLNLPPAGSGVSGPDIINVNSEPQNVLPEPKSSSTMELVDSVAEVNQNKEQEAKFPIND
SLLVGFGDKSSSPSASGSPISYPVIDLTEKPSADSSMQPSAAVAMQAPLQDARGNFEVEM
SLLQELEEMGFKQVDLNKEILRKNEYDLEQSVDDLCGVAEWDPILEELKEMGFCDKEMNK
KLLKKNNGSIKRVVMDLIAGEQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400046670
Transcript Infomation

pacid=37460814 locus=PGSC0003DMG400018122 ID=PGSC0003DMT400046670.v4.03 annot-version=v4.03
Sequence

ATGGCTATGGAGTCATCTATTGTGATCAAGGTCAAGTATGAAGAGACACTCAGACGGTTC
AATGCTTGTGTCATCAATGAGAAACTTGATCTAGACATTGGTGGATTGAGAGACAAGATT
ATTCAACTTTTCAATTTCGCTCATGATGCTGAACTCACACTAACATATATCGATGAGGAT
GGGGATGTAGTCACACTTGTTGATGATGAGGATCTGCAGGATGTTATGAGGCAGGACCTG
AATCCCTTGAGAATATCTGCGAGGTTGAATGCTGGCGAAAGAAGCGGCAGAGCTTCAGCT
AGATCTAGTGGAAATTCTACCCCTTTACGATCACCTCGGGTCCAGCCTCCATTCCTAAAC
TTGAATTCCCGTGTTTCTGACGTTCTCAAGTACATTCCAGAACCTCTGCGTGAATCTGTG
ATGAAGGTCTGTTCTGATATGACTGCATCGGCCTCATCCTCTGCTCCCATCCTTGCTGAG
CTTGTTGATGCTATGTCTGAGATGGGGCTATCTTACTACCAAAATCAGGCTTCAGGGTCT
CAGGCTGTCAAAGAAGCTGGCTCCTGTAGTGGCATATCTAAAGGAAATACTAAGAGTGCT
GATGGGGGAATGCCAAATGTCAAAATTGGAGAGTCATCCCCAAAGAAGAATAGGCCTCTC
ACAGCATTACATGGTGAACCAAAACCTAACGCCTCCAATGAAGCTGTAGATGCCTCAGTC
AAGCTAGTATGTAAATCAGAAACTTTGGAAGGTGATCGAACCGAAGATCTGTCATCATCA
TTCAAAGGTTCTAAAGCTCAGACTTCGCTGGTAAACAGTTTGGAGAAGGATAAGAAATTT
GATGTTCGCAGTCTTGACGGAAGGACTATTGGCTATGCATATGTGAGAAACTCACCTATT
CCACCAGAAAAGACTTCTGATGAGCAGCCCAGCAAGGGACATCCAGTAGCTAAACCGGTT
GATTTGGGTGGCTCTGCAAGTTCCAGTAAAGTGAAACAATGCAACTGGGATTCCCCTAAT
GCAGATTCCAGTGGCAGTTCAATCAACATGCCTTATGATGGCTTTACTCCTTCAGGTCTA
GTTCATCTGAACACTGTAAATGTTAATGATTCCCATAATGCAGGTTCTAGTGGCAGTTCA
ATGAAGATGCCGTATGATGGCTTCAGACCTGCTGTACGTCATCTAGGTCCACTGATTCCT
GTGAATGCGTGTCCGTTTTCTGGGGTGCCAACAGTAAATAACCCTATTCCACCTCAAAAC
TTCTCTTTTGAGGTCCCACTTAAAAGGAGCCATAATCACAGTGATGGGACTGGGACTATT
TTCCATAAAGGTGTTCGCTGTGATGGTTGTGGGGTTCATCCGATAACTGGACCTAGGTTC
ATATCTAAAGTGAAGGAGAACTACGATCTCTGCAGCATATGTTTTGCTGAAATGGGAAAT
GATGCTGATTACATCAGAATGGATCGTCCTCTAACTTACCCGAATCCCTGGTCTTTCAAG
AGTTTACATGATCTGCATGGAAGGTTGCGTCCCCGTCCCCCAACTGTCCCACAAGTCATT
CGAGGCTTTGGGTTGAAAGCAGGTCGGCCGAAGCTGGACAGCCGCTTCATACAGGATGTC
AATGTCCTGGATGGAACCATCATGGCCCCCTTGACTCGATTTACCAAGATCTGGAGAATG
AAGAACAATGGTAATCTCGTTTGGCCTCAAGGAACTCAACTTGTTTGGATTGGCGGTGAT
AAATTAAGTGATAGATTCTCTGTTGAATTAGAGATAACTACAGCTGGCTTGGCTGTTGAC
CAGGAGCTTGATGTGGCGGTTGATTTTACTGCTCCTGAGCATCCTGGCAGGTACATATCC
TACTGGAGGTTGGCTTCGGCTTCAGGACAGAAATTTGGCCAGCGTGTATGGGTGCTTATC
CAGGTCGATGCTTTATTAAGCGTGCCAAAAAAGGGGTTGGTCCATGAAGCTTTTCAGGGG
TTAAACTTGAATTTACCTCCTGCCGGCAGTGGTGTGTCTGGACCTGATATTATAAATGTG
AATTCAGAACCTCAGAATGTCCTTCCTGAGCCTAAGAGCTCCAGCACAATGGAGTTGGTT
GATTCAGTGGCTGAAGTAAACCAAAACAAGGAGCAGGAGGCCAAGTTTCCAATTAATGAT
AGCTTGTTGGTTGGTTTTGGTGACAAGTCAAGTTCTCCATCTGCTTCTGGTTCACCAATT
TCATATCCAGTTATTGATTTAACTGAGAAACCATCAGCGGACTCTTCCATGCAACCATCA
GCTGCTGTAGCTATGCAGGCACCGCTCCAGGATGCTAGAGGAAATTTCGAAGTTGAGATG
TCTCTCCTCCAGGAGTTGGAGGAAATGGGTTTCAAGCAGGTAGATCTGAACAAAGAGATC
TTGAGGAAGAATGAGTATGATTTGGAGCAGTCAGTTGATGATCTCTGTGGTGTTGCTGAG
TGGGATCCTATCCTTGAAGAGCTGAAGGAGATGGGTTTTTGTGACAAGGAAATGAACAAG
AAGCTGCTGAAGAAGAACAACGGAAGCATCAAGCGTGTTGTGATGGATCTTATTGCTGGA
GAGCAGTAG