Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046653
CDS Infomation

pacid=37463702 polypeptide=PGSC0003DMP400031565 locus=PGSC0003DMG400018116 ID=PGSC0003DMT400046653.v4.03 annot-version=v4.03
Sequence

ATGAGACTTTATGTGTATTTGTTGGAAGGCAAGGATTGGACAGTGGAGGATTCTTATGTG
AAGTTAAAAGTTGGCAAGTTCAAGTCGAAGACTAGGGTGTTGAAGAATACGAAAAACCCT
ATTTGGAATGAAGAGTTTGTATTCAGGGTTCACGACTTAGAAGATGAACTTGTTCTCTCT
GTTTATCAGCATCATGATAATTCCGGAATTTTTAATGTTTATGGAGATTTAGTTGGGAAA
GTGAAAATACCTGTTTGGTCTGTTGCCGCTGAGGAAAATCAGAACTTGCCACCTACTTGG
TTTTCAATTAAAAAACCTAAAAGTGCAAAATCTGTTGACAAGTATTGCGGGAAGATTCTT
CTCACTGTTTCTTTACATGGGAAGGGCAAAGATCTATCCACCAACCATGTTGGTTATGTA
AATCCAACAAATGACACTTTTAAAGAAATTGAAGTGACAAACATTTCTTCTCAAGATTTC
CATGGTTTTGCAGCTCATTCCAAGAAAATTTCAGAAGGGAAACATTTAATCAAGAACATT
GCTTGCCATTTTGAGAAGCTTTTCGGCAAGAATGAAGAAGCCAAGAAAAGTGACGAGGAA
GAAGTGAAGAAGGATGATTCTTCTGACCTTTCCACCGTCACATCTGACTTTGAAGACCCT
GTGGAGGAGCCTCCGGTTAGCCATAGCTTTGAAGAAGTGATTGAGCGAATGCAGCCGACC
AGTGAAGATAAAGAAATGCCAGGGGACCTGCAGGGTGGAGTCCTGCTAGACCAGACATAT
GTTCTTCCCTCAAAAGAACTTAACACGTTTCTTTTCGCTCCTGGTTCACAGTTCAGGAAC
GATCTGGCGGAGTTGCAGGGTACAATAGATGTTCAAGAGGGTCCTTGGACATGGAAATCA
GATGACATGTGTGTAACAAGAGTTGTCACCTATATTAAAGCAGCAAGTAAGTTAGTTAAG
GCTGTTCAAGCCACAGAGGAACAAGCATATATTAAGGCTGATGGAAAAGAATTTGCTGTT
TTTGTCTCTGTAAATACCCCTGACGTTCCATATGGGAGTACTTTCAAGATTGAGTTGCTT
TACAAGATAATGCCTGGCCAACAGGAACCTTCTGGTGAAGAATCCGCACGTCTGATTATA
TCTTGGGCAATTAACTTCTGCCAGAACACTATGATGAAATCAATGATTGAGGGAGGAGCT
AGGCAAGGATTGAAGGAGAGCTTTGACCAGTTTGCAGAGTTATTAGCTCGCAAACTGAAA
GTTACAACTTCAAAATTTGTCTTAGAGAAGGATCGAGCTTTGGCATCCTTGCAGACTGAA
CAACAGTCAGATTGGGAAATGGCAAAGGAGTACTTTTGGAATTTTACAGTAGTATCTACT
ATTTTCATGGTTTTGTATGTCTTTGTGCACATCTTATTAAGTGAACCTAGCAAATTACAA
GGACTGGAGTCTTATGGTTTTGATTTGCCGGATAGTGTTGGAGAAATTATCACCAGTGGA
ATATTAGTCCTTCAATTGGAGCGGGTGTATTACATGGTTTCACGTTTTGTAGAAGCTAGG
CTGCGAAGAGGAAATGATAATGGAGTTAAAGCACAAGGTGATGGATGGGTACTTACTGTA
GCTTTGATTGAGGGAATGAACTTAGCTTCCTTGGACCCAACAGATCCCCCAGATCCATAT
GTGGTCTTAACATGCAATGGCAAAACAAAAACCAGCTCTGTCCAGCTTCAAACTCTTGAC
CCTCAGTGGAGTGAGATACTAGAGTTTGATGCTGCAGAAGAACCACCTTCGGTGCTAGAT
GTGGAAGTTTTTGACTTCGACGGTCCATTTGATCAAGCTTCATCACTTGGACATGCAGAA
ATCAATTTCCTAAAACACACTTCTGCAGAATTGGCAGATATTTGGGTTCCTCTCGAGGGA
AAGATTGCGTTGTCTTCACAATCGAAGTTGCACTTGAGGATTTTTTTGGACAATAACAAT
GGAGTTGAAACTATCCGAGACTACCTTACAAAGATGGAAAAAGAAGTTGGAAAAAAATTA
AACCTTCGGTCACCACACAAGAACTCAGCATTTCAGAAAATTTTTGGATTGCCTCCAGAA
GAGTTTCTCATCAATGACTATTCTTGCTCGCTCAAAAGAAAGATGCCATTACAGGGGCGG
ATCTTTCTATCTGCCAGAATTGTGGGGTTTTATGCGAATTTGTTTGGTCATAAAACAAAG
TTTTTCTTCCTGTGGGAGGATATCGAGGATGTTAATGTGGTTTCCCCTTCATGGTCAACC
ATGGGGAGTCCTGCACTTGTGATGATTTTGCGCAAAGGTCGAGGTGTTGATGCTAGGCAT
GGTGCGAAGTGTCAAGATGAAGAAGGCCGACTGCATTTCTGTTTTCATTCATTTGTCTCA
TTCAATGATGCAAGCAGGACAATCATGGCATTGTGGAGAACAAGGGCACTGCCTCTGGAT
CAGAAAGAACAAATTGTAGAAGCGCAGCTGGAGAAGGATGAAAAGCTTGCTTTGTCTGAA
GACACTTCATCCTACTTGGTTGTTGAGGATGTACAAATGTCTAAAGTCTATTCTGCAGAA
CTACCTGTCAATGTTAAATCACTGATGCGGATGTTTGATGGAGGAGACTTGGAGCATAGA
GTGATGAGCAAATCTGGCTGCCTAAATTATGCGACGACTTCATGGGAAACTGTAGCTCCT
GATGTTTCTGAGAGACAAGTATGTTACAAATTCAATCGCTTCATCTCAATATTCGGTGGT
GAAGTTACAAGCACGCAACAAAAATCACCTATTGCAAATGGCTCTGGATGGACCATCAAT
GAGATCATGGTCCTGCATGATGTCCCGTTTGGTGATCATTTCCGAGTACAATTCAGATAC
CAGATCGAGAGCTCTACTTCTCTACATAATTCATGCAAGTGTGATGTTAGTGTTGGTGTA
ATGTGGCTTAAAAACACAAAATTTGAGCAAAGAATAACAAGGAATATTATTGGAAAATTT
ACCACTAGAGTAAAGGATATATTAGAGTTGGTTGAAAAGGAGATATTGTTATCAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031565
PEP Infomation

pacid=37463702 transcript=PGSC0003DMT400046653 locus=PGSC0003DMG400018116 ID=PGSC0003DMT400046653.v4.03 annot-version=v4.03
Sequence

MRLYVYLLEGKDWTVEDSYVKLKVGKFKSKTRVLKNTKNPIWNEEFVFRVHDLEDELVLS
VYQHHDNSGIFNVYGDLVGKVKIPVWSVAAEENQNLPPTWFSIKKPKSAKSVDKYCGKIL
LTVSLHGKGKDLSTNHVGYVNPTNDTFKEIEVTNISSQDFHGFAAHSKKISEGKHLIKNI
ACHFEKLFGKNEEAKKSDEEEVKKDDSSDLSTVTSDFEDPVEEPPVSHSFEEVIERMQPT
SEDKEMPGDLQGGVLLDQTYVLPSKELNTFLFAPGSQFRNDLAELQGTIDVQEGPWTWKS
DDMCVTRVVTYIKAASKLVKAVQATEEQAYIKADGKEFAVFVSVNTPDVPYGSTFKIELL
YKIMPGQQEPSGEESARLIISWAINFCQNTMMKSMIEGGARQGLKESFDQFAELLARKLK
VTTSKFVLEKDRALASLQTEQQSDWEMAKEYFWNFTVVSTIFMVLYVFVHILLSEPSKLQ
GLESYGFDLPDSVGEIITSGILVLQLERVYYMVSRFVEARLRRGNDNGVKAQGDGWVLTV
ALIEGMNLASLDPTDPPDPYVVLTCNGKTKTSSVQLQTLDPQWSEILEFDAAEEPPSVLD
VEVFDFDGPFDQASSLGHAEINFLKHTSAELADIWVPLEGKIALSSQSKLHLRIFLDNNN
GVETIRDYLTKMEKEVGKKLNLRSPHKNSAFQKIFGLPPEEFLINDYSCSLKRKMPLQGR
IFLSARIVGFYANLFGHKTKFFFLWEDIEDVNVVSPSWSTMGSPALVMILRKGRGVDARH
GAKCQDEEGRLHFCFHSFVSFNDASRTIMALWRTRALPLDQKEQIVEAQLEKDEKLALSE
DTSSYLVVEDVQMSKVYSAELPVNVKSLMRMFDGGDLEHRVMSKSGCLNYATTSWETVAP
DVSERQVCYKFNRFISIFGGEVTSTQQKSPIANGSGWTINEIMVLHDVPFGDHFRVQFRY
QIESSTSLHNSCKCDVSVGVMWLKNTKFEQRITRNIIGKFTTRVKDILELVEKEILLSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400046653
Transcript Infomation

pacid=37463702 locus=PGSC0003DMG400018116 ID=PGSC0003DMT400046653.v4.03 annot-version=v4.03
Sequence

ATGAGACTTTATGTGTATTTGTTGGAAGGCAAGGATTGGACAGTGGAGGATTCTTATGTG
AAGTTAAAAGTTGGCAAGTTCAAGTCGAAGACTAGGGTGTTGAAGAATACGAAAAACCCT
ATTTGGAATGAAGAGTTTGTATTCAGGGTTCACGACTTAGAAGATGAACTTGTTCTCTCT
GTTTATCAGCATCATGATAATTCCGGAATTTTTAATGTTTATGGAGATTTAGTTGGGAAA
GTGAAAATACCTGTTTGGTCTGTTGCCGCTGAGGAAAATCAGAACTTGCCACCTACTTGG
TTTTCAATTAAAAAACCTAAAAGTGCAAAATCTGTTGACAAGTATTGCGGGAAGATTCTT
CTCACTGTTTCTTTACATGGGAAGGGCAAAGATCTATCCACCAACCATGTTGGTTATGTA
AATCCAACAAATGACACTTTTAAAGAAATTGAAGTGACAAACATTTCTTCTCAAGATTTC
CATGGTTTTGCAGCTCATTCCAAGAAAATTTCAGAAGGGAAACATTTAATCAAGAACATT
GCTTGCCATTTTGAGAAGCTTTTCGGCAAGAATGAAGAAGCCAAGAAAAGTGACGAGGAA
GAAGTGAAGAAGGATGATTCTTCTGACCTTTCCACCGTCACATCTGACTTTGAAGACCCT
GTGGAGGAGCCTCCGGTTAGCCATAGCTTTGAAGAAGTGATTGAGCGAATGCAGCCGACC
AGTGAAGATAAAGAAATGCCAGGGGACCTGCAGGGTGGAGTCCTGCTAGACCAGACATAT
GTTCTTCCCTCAAAAGAACTTAACACGTTTCTTTTCGCTCCTGGTTCACAGTTCAGGAAC
GATCTGGCGGAGTTGCAGGGTACAATAGATGTTCAAGAGGGTCCTTGGACATGGAAATCA
GATGACATGTGTGTAACAAGAGTTGTCACCTATATTAAAGCAGCAAGTAAGTTAGTTAAG
GCTGTTCAAGCCACAGAGGAACAAGCATATATTAAGGCTGATGGAAAAGAATTTGCTGTT
TTTGTCTCTGTAAATACCCCTGACGTTCCATATGGGAGTACTTTCAAGATTGAGTTGCTT
TACAAGATAATGCCTGGCCAACAGGAACCTTCTGGTGAAGAATCCGCACGTCTGATTATA
TCTTGGGCAATTAACTTCTGCCAGAACACTATGATGAAATCAATGATTGAGGGAGGAGCT
AGGCAAGGATTGAAGGAGAGCTTTGACCAGTTTGCAGAGTTATTAGCTCGCAAACTGAAA
GTTACAACTTCAAAATTTGTCTTAGAGAAGGATCGAGCTTTGGCATCCTTGCAGACTGAA
CAACAGTCAGATTGGGAAATGGCAAAGGAGTACTTTTGGAATTTTACAGTAGTATCTACT
ATTTTCATGGTTTTGTATGTCTTTGTGCACATCTTATTAAGTGAACCTAGCAAATTACAA
GGACTGGAGTCTTATGGTTTTGATTTGCCGGATAGTGTTGGAGAAATTATCACCAGTGGA
ATATTAGTCCTTCAATTGGAGCGGGTGTATTACATGGTTTCACGTTTTGTAGAAGCTAGG
CTGCGAAGAGGAAATGATAATGGAGTTAAAGCACAAGGTGATGGATGGGTACTTACTGTA
GCTTTGATTGAGGGAATGAACTTAGCTTCCTTGGACCCAACAGATCCCCCAGATCCATAT
GTGGTCTTAACATGCAATGGCAAAACAAAAACCAGCTCTGTCCAGCTTCAAACTCTTGAC
CCTCAGTGGAGTGAGATACTAGAGTTTGATGCTGCAGAAGAACCACCTTCGGTGCTAGAT
GTGGAAGTTTTTGACTTCGACGGTCCATTTGATCAAGCTTCATCACTTGGACATGCAGAA
ATCAATTTCCTAAAACACACTTCTGCAGAATTGGCAGATATTTGGGTTCCTCTCGAGGGA
AAGATTGCGTTGTCTTCACAATCGAAGTTGCACTTGAGGATTTTTTTGGACAATAACAAT
GGAGTTGAAACTATCCGAGACTACCTTACAAAGATGGAAAAAGAAGTTGGAAAAAAATTA
AACCTTCGGTCACCACACAAGAACTCAGCATTTCAGAAAATTTTTGGATTGCCTCCAGAA
GAGTTTCTCATCAATGACTATTCTTGCTCGCTCAAAAGAAAGATGCCATTACAGGGGCGG
ATCTTTCTATCTGCCAGAATTGTGGGGTTTTATGCGAATTTGTTTGGTCATAAAACAAAG
TTTTTCTTCCTGTGGGAGGATATCGAGGATGTTAATGTGGTTTCCCCTTCATGGTCAACC
ATGGGGAGTCCTGCACTTGTGATGATTTTGCGCAAAGGTCGAGGTGTTGATGCTAGGCAT
GGTGCGAAGTGTCAAGATGAAGAAGGCCGACTGCATTTCTGTTTTCATTCATTTGTCTCA
TTCAATGATGCAAGCAGGACAATCATGGCATTGTGGAGAACAAGGGCACTGCCTCTGGAT
CAGAAAGAACAAATTGTAGAAGCGCAGCTGGAGAAGGATGAAAAGCTTGCTTTGTCTGAA
GACACTTCATCCTACTTGGTTGTTGAGGATGTACAAATGTCTAAAGTCTATTCTGCAGAA
CTACCTGTCAATGTTAAATCACTGATGCGGATGTTTGATGGAGGAGACTTGGAGCATAGA
GTGATGAGCAAATCTGGCTGCCTAAATTATGCGACGACTTCATGGGAAACTGTAGCTCCT
GATGTTTCTGAGAGACAAGTATGTTACAAATTCAATCGCTTCATCTCAATATTCGGTGGT
GAAGTTACAAGCACGCAACAAAAATCACCTATTGCAAATGGCTCTGGATGGACCATCAAT
GAGATCATGGTCCTGCATGATGTCCCGTTTGGTGATCATTTCCGAGTACAATTCAGATAC
CAGATCGAGAGCTCTACTTCTCTACATAATTCATGCAAGTGTGATGTTAGTGTTGGTGTA
ATGTGGCTTAAAAACACAAAATTTGAGCAAAGAATAACAAGGAATATTATTGGAAAATTT
ACCACTAGAGTAAAGGATATATTAGAGTTGGTTGAAAAGGAGATATTGTTATCAAGTTGA