Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046647
CDS Infomation

pacid=37462117 polypeptide=PGSC0003DMP400031559 locus=PGSC0003DMG400018114 ID=PGSC0003DMT400046647.v4.03 annot-version=v4.03
Sequence

ATGACTAAAATTTCCTCTCTCCTTAAATTGCTACTTTTCTTGATATTTGCTGGATGGCTA
TCTGTTTGGCTTCTCAAGCCCACACAACTATGGACTAAAACTTGGAAGTTAGCAGAAAAA
AAGGCATCAGCCTCATTCTTAACCCAATCTGGTCTTAATTTTGCGGTCTATACCTTTCCT
GTTATTGCTATAGCTATAGTTGGTTTTGTTTACTTGGCACTGAAACAGAAGGAACCAATC
AGCAGGAAAGGACGGTCTTCACTATCTGTTCTCTCCAATCCAGTAGTTGTGAATAAGTAC
ATAGGCATTCTGTCTGGTTTTGAAATCCTTGCTGTATGTCTATTCGTCATCTTTCTAGCA
TGGACATTCTATGTTCGCATCTCCAATGACTTCAAGAAGATGGTACCAATGAAATCATTC
ACTTTGTCTGTATGGCAATACAGAGTATTTAGAGTGGCAACTAGGAGTGGTTTATTAGCA
GAAGCTTGCTTAGCTCTTCTTCTTCTTCCCATCTTGAGGGGAATGTCAGTATTTCGAATA
CTTGGCATCCAATTTGAAGCTTCGGTGAGATATCACGTATGGCTTGGGACAGCAATGATA
TTATTTGGTACATTACATGGTGGAGGTACTTTACTAATATGGGGTATCAAACATCACCTT
GGAGATGAGATGTGGAGATGGCAAAAGACAGGGCGTATTTACCTTGCGGGGGAGATCACT
CTTCTTACAGGATTGGTCATCTGGATCACATCACTCCCACAGATAAGAAGGAAACGATTC
GAGATCTTCTATTACACACATCACTTGTATATGGTTTTCTTGGTTTTTTTCCTGTTTCAT
ACTGGAGATCGCCACTTCTACATGGTTTTGCCTGGCTTTTTTTTGTTTTGCCTTGACAAG
ATACTCCGAATGATTCAGTCAAGGCCAGAAACGTATATTCTTTCTGCTCGAATCTTTCCT
TCCAAAGCCATTGAGTTGACTCTGCCAAAAGATCCAAGGTTGACATATGCACCAACAAGC
GTGATTTTTATCAAGATTCCAAGGATTTCGAATTTTCAATGGCACCCTTTTAGCATAACT
TCTAGCTCGAAAGTAGATAAACACACCATCTCTATTTTGATCAAAGCTGAGGGAAGGTGG
ACAAGCACTCTCTGTAATATGCTACATTCAAAGCCTGATTCAGAAGCTGGTGAAATGAGG
TTCTTTCAAGTAGCAACAGAAGGCCCTTATGGACCTTCATCAATGGACTTTCTGAGATAC
GATAGTCTACTTCTAGTTGCGGGTGGAATAGGGGTTACACCATTTTTGAGCATTCTGCAA
GAAATTGCCTCTACAAGAAGTAGCAAAAATGTATTACCTGTAAAAATACAGCTTGTCTAC
ACTACAAAAGACTCCCAAGGCATCTGCTTGTTAGATCCAGTTCTACCACATGTTTTCGAT
GCAGAACAACATTATCTACAACTGAAAGTGTTTGTGACACGTGAACACCAATCCAACAGA
TCGCTGCGAGAAGTGCTAAACGAGGTCCCAAAAATACAGAACATTCATTTCACCAACAAT
CGTCCCGGTCATGCAATATATGGACTTGAGAACTTACAATGGATGTCCGTCCTGATTTTG
GTGGTGTCTGTTGTTTTCCTAGCATTCCTTATCATCTCCAACCATGTTTTTATCAAGCCT
GATAAAAAGTCATCTGAACAGAAAACTGCTACTTCAGTAGTGGACATTCTTCTCATATGC
TCGTTTACATTAGCTTTAATATCCGGCACCTTGGTGGCTACCATATGGAGATGGAAGAGG
CTAAGAGAAGAAATTCCATCATTTTCTGAAAAAGAAAGTAAAGCAATGAAACCAACAGGA
GCAAACAGAGTTTTCGATCAACACGAAATCCATTATGGAGCAAGACCAAACTTTAAAGAT
ATCTTTTCCCAACTTGCTAATGAATCCAAAGGATCCAATATTGGCGTCTTCGTTTGTGGG
CCTGAGACATTGAAAGAATCGGTAGCAACAACTTGTCAGCTAATCTCTAACGGTTTTCAA
AGTGGAGGACAAGATCATAAACCATTTTTCCGCTTTCATTCGTTAAATTTCAGTCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031559
PEP Infomation

pacid=37462117 transcript=PGSC0003DMT400046647 locus=PGSC0003DMG400018114 ID=PGSC0003DMT400046647.v4.03 annot-version=v4.03
Sequence

MTKISSLLKLLLFLIFAGWLSVWLLKPTQLWTKTWKLAEKKASASFLTQSGLNFAVYTFP
VIAIAIVGFVYLALKQKEPISRKGRSSLSVLSNPVVVNKYIGILSGFEILAVCLFVIFLA
WTFYVRISNDFKKMVPMKSFTLSVWQYRVFRVATRSGLLAEACLALLLLPILRGMSVFRI
LGIQFEASVRYHVWLGTAMILFGTLHGGGTLLIWGIKHHLGDEMWRWQKTGRIYLAGEIT
LLTGLVIWITSLPQIRRKRFEIFYYTHHLYMVFLVFFLFHTGDRHFYMVLPGFFLFCLDK
ILRMIQSRPETYILSARIFPSKAIELTLPKDPRLTYAPTSVIFIKIPRISNFQWHPFSIT
SSSKVDKHTISILIKAEGRWTSTLCNMLHSKPDSEAGEMRFFQVATEGPYGPSSMDFLRY
DSLLLVAGGIGVTPFLSILQEIASTRSSKNVLPVKIQLVYTTKDSQGICLLDPVLPHVFD
AEQHYLQLKVFVTREHQSNRSLREVLNEVPKIQNIHFTNNRPGHAIYGLENLQWMSVLIL
VVSVVFLAFLIISNHVFIKPDKKSSEQKTATSVVDILLICSFTLALISGTLVATIWRWKR
LREEIPSFSEKESKAMKPTGANRVFDQHEIHYGARPNFKDIFSQLANESKGSNIGVFVCG
PETLKESVATTCQLISNGFQSGGQDHKPFFRFHSLNFSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400046647
Transcript Infomation

pacid=37462117 locus=PGSC0003DMG400018114 ID=PGSC0003DMT400046647.v4.03 annot-version=v4.03
Sequence

ATGACTAAAATTTCCTCTCTCCTTAAATTGCTACTTTTCTTGATATTTGCTGGATGGCTA
TCTGTTTGGCTTCTCAAGCCCACACAACTATGGACTAAAACTTGGAAGTTAGCAGAAAAA
AAGGCATCAGCCTCATTCTTAACCCAATCTGGTCTTAATTTTGCGGTCTATACCTTTCCT
GTTATTGCTATAGCTATAGTTGGTTTTGTTTACTTGGCACTGAAACAGAAGGAACCAATC
AGCAGGAAAGGACGGTCTTCACTATCTGTTCTCTCCAATCCAGTAGTTGTGAATAAGTAC
ATAGGCATTCTGTCTGGTTTTGAAATCCTTGCTGTATGTCTATTCGTCATCTTTCTAGCA
TGGACATTCTATGTTCGCATCTCCAATGACTTCAAGAAGATGGTACCAATGAAATCATTC
ACTTTGTCTGTATGGCAATACAGAGTATTTAGAGTGGCAACTAGGAGTGGTTTATTAGCA
GAAGCTTGCTTAGCTCTTCTTCTTCTTCCCATCTTGAGGGGAATGTCAGTATTTCGAATA
CTTGGCATCCAATTTGAAGCTTCGGTGAGATATCACGTATGGCTTGGGACAGCAATGATA
TTATTTGGTACATTACATGGTGGAGGTACTTTACTAATATGGGGTATCAAACATCACCTT
GGAGATGAGATGTGGAGATGGCAAAAGACAGGGCGTATTTACCTTGCGGGGGAGATCACT
CTTCTTACAGGATTGGTCATCTGGATCACATCACTCCCACAGATAAGAAGGAAACGATTC
GAGATCTTCTATTACACACATCACTTGTATATGGTTTTCTTGGTTTTTTTCCTGTTTCAT
ACTGGAGATCGCCACTTCTACATGGTTTTGCCTGGCTTTTTTTTGTTTTGCCTTGACAAG
ATACTCCGAATGATTCAGTCAAGGCCAGAAACGTATATTCTTTCTGCTCGAATCTTTCCT
TCCAAAGCCATTGAGTTGACTCTGCCAAAAGATCCAAGGTTGACATATGCACCAACAAGC
GTGATTTTTATCAAGATTCCAAGGATTTCGAATTTTCAATGGCACCCTTTTAGCATAACT
TCTAGCTCGAAAGTAGATAAACACACCATCTCTATTTTGATCAAAGCTGAGGGAAGGTGG
ACAAGCACTCTCTGTAATATGCTACATTCAAAGCCTGATTCAGAAGCTGGTGAAATGAGG
TTCTTTCAAGTAGCAACAGAAGGCCCTTATGGACCTTCATCAATGGACTTTCTGAGATAC
GATAGTCTACTTCTAGTTGCGGGTGGAATAGGGGTTACACCATTTTTGAGCATTCTGCAA
GAAATTGCCTCTACAAGAAGTAGCAAAAATGTATTACCTGTAAAAATACAGCTTGTCTAC
ACTACAAAAGACTCCCAAGGCATCTGCTTGTTAGATCCAGTTCTACCACATGTTTTCGAT
GCAGAACAACATTATCTACAACTGAAAGTGTTTGTGACACGTGAACACCAATCCAACAGA
TCGCTGCGAGAAGTGCTAAACGAGGTCCCAAAAATACAGAACATTCATTTCACCAACAAT
CGTCCCGGTCATGCAATATATGGACTTGAGAACTTACAATGGATGTCCGTCCTGATTTTG
GTGGTGTCTGTTGTTTTCCTAGCATTCCTTATCATCTCCAACCATGTTTTTATCAAGCCT
GATAAAAAGTCATCTGAACAGAAAACTGCTACTTCAGTAGTGGACATTCTTCTCATATGC
TCGTTTACATTAGCTTTAATATCCGGCACCTTGGTGGCTACCATATGGAGATGGAAGAGG
CTAAGAGAAGAAATTCCATCATTTTCTGAAAAAGAAAGTAAAGCAATGAAACCAACAGGA
GCAAACAGAGTTTTCGATCAACACGAAATCCATTATGGAGCAAGACCAAACTTTAAAGAT
ATCTTTTCCCAACTTGCTAATGAATCCAAAGGATCCAATATTGGCGTCTTCGTTTGTGGG
CCTGAGACATTGAAAGAATCGGTAGCAACAACTTGTCAGCTAATCTCTAACGGTTTTCAA
AGTGGAGGACAAGATCATAAACCATTTTTCCGCTTTCATTCGTTAAATTTCAGTCTCTAA