Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046637
CDS Infomation

pacid=37462183 polypeptide=PGSC0003DMP400031550 locus=PGSC0003DMG400018110 ID=PGSC0003DMT400046637.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAAAAATTGCAAGTACTAAGAGTGTGAAGAACCAGACTGCCCTGCTTGCAGCA
GGGCACTGGTTAATGCTTTCTGTAGCCATCAATGTTGGGTTTTTGTTTAAGCTGATACAT
GACGGGAATTTAAGAATAGACTGGTATGGCCTGCACAATGGTCAAGACAATGGTGGTCAC
CTCTCTTCTTATGCTGCTGAGCCGAAGCCTGATGGCCAAATCCAAAATAAGTACATAAAT
TTGGATCATGGTGATCCAACTATGTACCAGAGTTACTGGAAACAGATGGGTGACAGAACC
GATGTTGTCATATCTGGTTGGCAATCTGTTAGTTATTTTTCGGATACCAAAACCGTTTGC
TGGTTTCTCGAACCAGGTTTTGCAAATGCAGTAACTAGATTGCACAAGCTAGTTGGAAAT
GCTGAGACTGGAAACCGGCACATCGTGGTTGGGACAGGATCTACCCAGCTGTTTCAGGCT
GTATTATATGCCCTCTGTCCATACGATGCTCCAGAGCCAATGAGTATTGTATCTGCTGCC
CCATTTTATTCGTCATACCCACTGATCACTGATTGCTTGAAATCTGGGCTCTACAAGTGG
AGAGGTGAAGTCGATGACTTCAACACAGATGAGCCCTATATAGAGCTTGTTACTTCCCCA
AACAATCCTGATGGATCAATCAGGGAAGCTGTGTTCAATGGGAGCGGACAAATATTGGTT
CATGACGTAGCTTATTATTGGCCTCAGTATACTCCAATTTCTTCTAGGGCAGACCATGAC
ATAATGTTGTTCACCCTATCCAAAAGCACGGGACATGCTGGGATGCGCTTAGGATGGGCA
CTTGTCAAAGATGAAGCAATTGCAAAAAAGATGGTCAAATTTATAGAGATAAGCAGCATT
GGTGTCTCTAAAGATTCACAAGTCAGAGCTGCTAAAATCCTGGATGTTATAAGCGATTCA
TACGAGGACTCAAAAACCTCAAATGAAAGCAAACGCTTCTTTGATTATGCCCAGGAGGAA
ATGGCTAAGAGGTGGAGTCAACTGCGAGAGGTAGTAAACAAAGGCCACGCGTTTAGTTTG
CCTACCTTACCTGTTGGAGAATGCAACTTCAGCCATCATACATTTGCAACACAGCCTGCT
TTTGCATGGCTGAAGTGCGAGCAGGTAGATGACTGTGAAAGTTTTCTGAAGAAGCACAAG
ATACTGACCAGAGGTGGGGTACATTTTGGTTCTAGTAAAAAGTATGTTAGGGCTAGTTTG
ATAGGTCACGAGGAAGACTATAACGAGTTTATTCGAAGATTGTCCTTGATAAACTCCGTG
GAGTCTCCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031550
PEP Infomation

pacid=37462183 transcript=PGSC0003DMT400046637 locus=PGSC0003DMG400018110 ID=PGSC0003DMT400046637.v4.03 annot-version=v4.03
Sequence

MASKIASTKSVKNQTALLAAGHWLMLSVAINVGFLFKLIHDGNLRIDWYGLHNGQDNGGH
LSSYAAEPKPDGQIQNKYINLDHGDPTMYQSYWKQMGDRTDVVISGWQSVSYFSDTKTVC
WFLEPGFANAVTRLHKLVGNAETGNRHIVVGTGSTQLFQAVLYALCPYDAPEPMSIVSAA
PFYSSYPLITDCLKSGLYKWRGEVDDFNTDEPYIELVTSPNNPDGSIREAVFNGSGQILV
HDVAYYWPQYTPISSRADHDIMLFTLSKSTGHAGMRLGWALVKDEAIAKKMVKFIEISSI
GVSKDSQVRAAKILDVISDSYEDSKTSNESKRFFDYAQEEMAKRWSQLREVVNKGHAFSL
PTLPVGECNFSHHTFATQPAFAWLKCEQVDDCESFLKKHKILTRGGVHFGSSKKYVRASL
IGHEEDYNEFIRRLSLINSVESP*

Transcript Sequence

Transcript ID

PGSC0003DMT400046637
Transcript Infomation

pacid=37462183 locus=PGSC0003DMG400018110 ID=PGSC0003DMT400046637.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAAAAATTGCAAGTACTAAGAGTGTGAAGAACCAGACTGCCCTGCTTGCAGCA
GGGCACTGGTTAATGCTTTCTGTAGCCATCAATGTTGGGTTTTTGTTTAAGCTGATACAT
GACGGGAATTTAAGAATAGACTGGTATGGCCTGCACAATGGTCAAGACAATGGTGGTCAC
CTCTCTTCTTATGCTGCTGAGCCGAAGCCTGATGGCCAAATCCAAAATAAGTACATAAAT
TTGGATCATGGTGATCCAACTATGTACCAGAGTTACTGGAAACAGATGGGTGACAGAACC
GATGTTGTCATATCTGGTTGGCAATCTGTTAGTTATTTTTCGGATACCAAAACCGTTTGC
TGGTTTCTCGAACCAGGTTTTGCAAATGCAGTAACTAGATTGCACAAGCTAGTTGGAAAT
GCTGAGACTGGAAACCGGCACATCGTGGTTGGGACAGGATCTACCCAGCTGTTTCAGGCT
GTATTATATGCCCTCTGTCCATACGATGCTCCAGAGCCAATGAGTATTGTATCTGCTGCC
CCATTTTATTCGTCATACCCACTGATCACTGATTGCTTGAAATCTGGGCTCTACAAGTGG
AGAGGTGAAGTCGATGACTTCAACACAGATGAGCCCTATATAGAGCTTGTTACTTCCCCA
AACAATCCTGATGGATCAATCAGGGAAGCTGTGTTCAATGGGAGCGGACAAATATTGGTT
CATGACGTAGCTTATTATTGGCCTCAGTATACTCCAATTTCTTCTAGGGCAGACCATGAC
ATAATGTTGTTCACCCTATCCAAAAGCACGGGACATGCTGGGATGCGCTTAGGATGGGCA
CTTGTCAAAGATGAAGCAATTGCAAAAAAGATGGTCAAATTTATAGAGATAAGCAGCATT
GGTGTCTCTAAAGATTCACAAGTCAGAGCTGCTAAAATCCTGGATGTTATAAGCGATTCA
TACGAGGACTCAAAAACCTCAAATGAAAGCAAACGCTTCTTTGATTATGCCCAGGAGGAA
ATGGCTAAGAGGTGGAGTCAACTGCGAGAGGTAGTAAACAAAGGCCACGCGTTTAGTTTG
CCTACCTTACCTGTTGGAGAATGCAACTTCAGCCATCATACATTTGCAACACAGCCTGCT
TTTGCATGGCTGAAGTGCGAGCAGGTAGATGACTGTGAAAGTTTTCTGAAGAAGCACAAG
ATACTGACCAGAGGTGGGGTACATTTTGGTTCTAGTAAAAAGTATGTTAGGGCTAGTTTG
ATAGGTCACGAGGAAGACTATAACGAGTTTATTCGAAGATTGTCCTTGATAAACTCCGTG
GAGTCTCCGTGA