Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046624
CDS Infomation

pacid=37461437 polypeptide=PGSC0003DMP400031543 locus=PGSC0003DMG400018104 ID=PGSC0003DMT400046624.v4.03 annot-version=v4.03
Sequence

ATGGCGGACCCGAACTCTTCCACTTCCGACTCGAAAAACAATAAAAAAGATTTTGCTACT
GCAATTTTGGAGAGGAAGAAATCTCCTAACCGCCTTATTGTTGATGAGGCCATAAATGAT
GATAATTCAGTGGTATCTATGCACCCTGCTAAAATGGAAGAGCTCCAGTTGTTTAGAGGA
GATACTGTATTGCTAAAGGGTAAAAAACGGAAGGACACTGTTTGTGTAGTCCTTGCGGAT
GAGCAATGTGAAGAACATAAGATCAGATTGAACAAAGTCGTTCGGGCGAACCTTCGGATT
CGTCTTGGGGATGTTGTATCTGTGCACCAGTGTCCTGATGTTAAGTATGCGAAGCGTGTT
CATATTCTTCCAATTGATGATACAATTGAGGGGATGACTGGCAACCTGTTTGATGCCTAC
TTGAAGCCATACTTCTTGGAGTCTTACCGCCCTGTGAGGAAGGGCGATCTCTTTGTAGTC
AGAGGTGGCATGCGAAGTGTTGAATTTAAAGTGGTTGAGACAGAACCTGGAGAATATTGT
GTTGTTGCACCTGATACAGAGATCTTTTGTGAGGGAGAACCAATCAAGCGTGAAGACGAG
GAGAGACTAAATGAAGTTGGATATGATGATGTTGGGGGTATGAGGAAGCAAATGGCTCAG
ATTCGTGAGCTGGTTGAACTCCCTCTGAGGCATCCACAGTTGTTCAAGTCAATTGGTGTG
AAACCACCGAAAGGTATTCTCCTGTATGGTCCTCCAGGATCGGGGAAAACCCTGATTGGA
AGAGCGGTGGCAAATGAGACTGGTGCCTTTTTCTTTTTGATTAATGGGCCTGAAATTATG
TCCAAATTGGCTGGTGAGAGTGAGGGTAACTTGAGGAAGGCATTTGAGGAAGCCGAAAAG
AATGCGCCGTCTATTATATTTATTGATGAGTTAGACTCGATTGCTCCAAAGAGAGAAAAG
ACACATGGTGAAGTTGAGCGGCGAATAGTTTCCCAACTTTTGACATTAATGGATGGGCTC
AAGTCTCGATCACATGTGGTTGTCATGGGGGCTACCAACAGACCAAACAGTATTGATCCT
GCTCTCAGGAGATTTGGAAGATTTGATCGGGAGATTGACATTGGCGTACCAGATGAAATA
GGGCGGCTGGAGATCCTACGGATTCATACTAAAAACATGAAGCTTGATGATAATGTTGAT
CTAGAGAGGGTTGCAAGAGATACACATGGTTATGTCGGAGCTGATCTTGCTGCCTTGTGC
ACTGAGGCTGCGCTGCAGTGTATCAGGGAGAAAATGGATGTTATTGACTTGGAGGATGAG
ACCATTGATGCTGAAGTGTTGAATTCAATGGCTGTGACTAATGAGCATTTTCAAGCTGCT
CTGGGTGCTTCAAATCCATCAGCACTACGAGAAACGGTAGTGGAGGTTCCCAATACCTCT
TGGGAGGATATTGGGGGACTGGAAAATGTCAAGCGGGAACTTCAAGAGACTGTTCAGTAT
CCGGTTGAGCATCCTGAGAAGTTTGAGAAGTTTGGAATGTCACCCTCTAAAGGGGTACTT
TTCTATGGACCACCTGGTTGTGGCAAAACTTTACTGGCCAAAGCTATTGCAAATGAGTGT
CAGGCTAACTTTATTAGTGTGAAAGGGCCGGAGTTGCTCACGATGTGGTTTGGAGAAAGT
GAAGCAAATGTTCGGGAAATATTTGACAAGGCACGGCAATCTGCTCCATGTGTACTGTTC
TTTGATGAACTCGATTCCATTGCTACACAGAGAGGAAATTCAGTGGGAGATGCTGGTGGT
GCTGCTGATAGAGTACTCAATCAATTGTTAACGGAGATGGATGGAATGACAGCAAAGAAA
ACAGTTTTCATTATTGGGGCAACAAATAGGCCAGACATTATTGACCCTGCATTGCTCAGA
CCAGGTCGTCTAGACCAATTAATTTACATCCCCCTCCCGGATGAAGCTTCCCGTCTTCAA
ATCTTCAAAGCATGTTTGCGTAAGTCCCCCGTCGCAAAGGACGTAGATCTGTCAGCTCTA
TCACGGTATACACGTGGTTTTAGTGGTGCAGACATAACTGAGATTTGTCAGCGAGCATGC
AAATACGCCATTAGGGAAAACATTGAAAAGGATATTGAGCGAGAGAGGAAGAGGAGCGTG
AACCCTGAAGCCATGGATGAAGATGACACTGATGAAGTGGCTGAAATAAAGGCTGCACAC
TTTGAGGAGTCCATGAAATATGCTCGAAGAAGTGTGAGTGATGCTGACATTAGGAAGTAC
CAGGCTTTTGCTCAAACATTACAACAATCACGGGGACTTGGAACTGAGTTCAAATTTGCA
GAGCATGCAGCTAATGCTACACCAACCGGGGCAACAGCCGATCCATTCGCTTCTGTTAAT
GCTGCTGGAGACGAGGACGACTTGTACAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031543
PEP Infomation

pacid=37461437 transcript=PGSC0003DMT400046624 locus=PGSC0003DMG400018104 ID=PGSC0003DMT400046624.v4.03 annot-version=v4.03
Sequence

MADPNSSTSDSKNNKKDFATAILERKKSPNRLIVDEAINDDNSVVSMHPAKMEELQLFRG
DTVLLKGKKRKDTVCVVLADEQCEEHKIRLNKVVRANLRIRLGDVVSVHQCPDVKYAKRV
HILPIDDTIEGMTGNLFDAYLKPYFLESYRPVRKGDLFVVRGGMRSVEFKVVETEPGEYC
VVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGMRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIGRAVANETGAFFFLINGPEIMSKLAGESEGNLRKAFEEAEK
NAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRSHVVVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEIGRLEILRIHTKNMKLDDNVDLERVARDTHGYVGADLAALC
TEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQAALGASNPSALRETVVEVPNTS
WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGG
AADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRLQ
IFKACLRKSPVAKDVDLSALSRYTRGFSGADITEICQRACKYAIRENIEKDIERERKRSV
NPEAMDEDDTDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGLGTEFKFA
EHAANATPTGATADPFASVNAAGDEDDLYS*

Transcript Sequence

Transcript ID

PGSC0003DMT400046624
Transcript Infomation

pacid=37461437 locus=PGSC0003DMG400018104 ID=PGSC0003DMT400046624.v4.03 annot-version=v4.03
Sequence

ATGGCGGACCCGAACTCTTCCACTTCCGACTCGAAAAACAATAAAAAAGATTTTGCTACT
GCAATTTTGGAGAGGAAGAAATCTCCTAACCGCCTTATTGTTGATGAGGCCATAAATGAT
GATAATTCAGTGGTATCTATGCACCCTGCTAAAATGGAAGAGCTCCAGTTGTTTAGAGGA
GATACTGTATTGCTAAAGGGTAAAAAACGGAAGGACACTGTTTGTGTAGTCCTTGCGGAT
GAGCAATGTGAAGAACATAAGATCAGATTGAACAAAGTCGTTCGGGCGAACCTTCGGATT
CGTCTTGGGGATGTTGTATCTGTGCACCAGTGTCCTGATGTTAAGTATGCGAAGCGTGTT
CATATTCTTCCAATTGATGATACAATTGAGGGGATGACTGGCAACCTGTTTGATGCCTAC
TTGAAGCCATACTTCTTGGAGTCTTACCGCCCTGTGAGGAAGGGCGATCTCTTTGTAGTC
AGAGGTGGCATGCGAAGTGTTGAATTTAAAGTGGTTGAGACAGAACCTGGAGAATATTGT
GTTGTTGCACCTGATACAGAGATCTTTTGTGAGGGAGAACCAATCAAGCGTGAAGACGAG
GAGAGACTAAATGAAGTTGGATATGATGATGTTGGGGGTATGAGGAAGCAAATGGCTCAG
ATTCGTGAGCTGGTTGAACTCCCTCTGAGGCATCCACAGTTGTTCAAGTCAATTGGTGTG
AAACCACCGAAAGGTATTCTCCTGTATGGTCCTCCAGGATCGGGGAAAACCCTGATTGGA
AGAGCGGTGGCAAATGAGACTGGTGCCTTTTTCTTTTTGATTAATGGGCCTGAAATTATG
TCCAAATTGGCTGGTGAGAGTGAGGGTAACTTGAGGAAGGCATTTGAGGAAGCCGAAAAG
AATGCGCCGTCTATTATATTTATTGATGAGTTAGACTCGATTGCTCCAAAGAGAGAAAAG
ACACATGGTGAAGTTGAGCGGCGAATAGTTTCCCAACTTTTGACATTAATGGATGGGCTC
AAGTCTCGATCACATGTGGTTGTCATGGGGGCTACCAACAGACCAAACAGTATTGATCCT
GCTCTCAGGAGATTTGGAAGATTTGATCGGGAGATTGACATTGGCGTACCAGATGAAATA
GGGCGGCTGGAGATCCTACGGATTCATACTAAAAACATGAAGCTTGATGATAATGTTGAT
CTAGAGAGGGTTGCAAGAGATACACATGGTTATGTCGGAGCTGATCTTGCTGCCTTGTGC
ACTGAGGCTGCGCTGCAGTGTATCAGGGAGAAAATGGATGTTATTGACTTGGAGGATGAG
ACCATTGATGCTGAAGTGTTGAATTCAATGGCTGTGACTAATGAGCATTTTCAAGCTGCT
CTGGGTGCTTCAAATCCATCAGCACTACGAGAAACGGTAGTGGAGGTTCCCAATACCTCT
TGGGAGGATATTGGGGGACTGGAAAATGTCAAGCGGGAACTTCAAGAGACTGTTCAGTAT
CCGGTTGAGCATCCTGAGAAGTTTGAGAAGTTTGGAATGTCACCCTCTAAAGGGGTACTT
TTCTATGGACCACCTGGTTGTGGCAAAACTTTACTGGCCAAAGCTATTGCAAATGAGTGT
CAGGCTAACTTTATTAGTGTGAAAGGGCCGGAGTTGCTCACGATGTGGTTTGGAGAAAGT
GAAGCAAATGTTCGGGAAATATTTGACAAGGCACGGCAATCTGCTCCATGTGTACTGTTC
TTTGATGAACTCGATTCCATTGCTACACAGAGAGGAAATTCAGTGGGAGATGCTGGTGGT
GCTGCTGATAGAGTACTCAATCAATTGTTAACGGAGATGGATGGAATGACAGCAAAGAAA
ACAGTTTTCATTATTGGGGCAACAAATAGGCCAGACATTATTGACCCTGCATTGCTCAGA
CCAGGTCGTCTAGACCAATTAATTTACATCCCCCTCCCGGATGAAGCTTCCCGTCTTCAA
ATCTTCAAAGCATGTTTGCGTAAGTCCCCCGTCGCAAAGGACGTAGATCTGTCAGCTCTA
TCACGGTATACACGTGGTTTTAGTGGTGCAGACATAACTGAGATTTGTCAGCGAGCATGC
AAATACGCCATTAGGGAAAACATTGAAAAGGATATTGAGCGAGAGAGGAAGAGGAGCGTG
AACCCTGAAGCCATGGATGAAGATGACACTGATGAAGTGGCTGAAATAAAGGCTGCACAC
TTTGAGGAGTCCATGAAATATGCTCGAAGAAGTGTGAGTGATGCTGACATTAGGAAGTAC
CAGGCTTTTGCTCAAACATTACAACAATCACGGGGACTTGGAACTGAGTTCAAATTTGCA
GAGCATGCAGCTAATGCTACACCAACCGGGGCAACAGCCGATCCATTCGCTTCTGTTAAT
GCTGCTGGAGACGAGGACGACTTGTACAGTTAA