Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046614
CDS Infomation

pacid=37458921 polypeptide=PGSC0003DMP400031536 locus=PGSC0003DMG400018099 ID=PGSC0003DMT400046614.v4.03 annot-version=v4.03
Sequence

ATGACGGACGGTCATCAGTTCAACAACATCTCTCTCGGTGGCCGTGGAGGCACCAATACA
GGGCAGCTTAAGGTTCAGTCTGGAGGTATATTATGGAAGAAACAAGGTGGTGGTAAGGCT
GTGGAAGTTGACAAGGAAGATATAGTGGGCCTTACTTGGATGAAAGTTCCTCGAAGTAAT
CAGCTGGGTGTGCGAATTAAGGATGGTCTTTACTACAAATTTACTGGTTTTCGTGACCAG
GATGTTGCGAGTTTGACCACCTATTTCCAGAGTTCTTGCGGGATATCTCCGGAGGAAAAG
CAGCTATCAATTAGTGGAAAAAATTGGGGAGAAGTTGATCTAAATGCGAATATGCTCGCT
TTTCTTGTTGGTAATAAGCAAGCATTTGAGATATCATTGGCAGACGTTTCTCAAACACAG
CTTCAAGGAAAAAATGATGTCATGTTGGAGTTCCATGTAGATGATACAACTGGGGCTAAT
GAAAAAGACTCCCTGATGGAAATCAGCTTTCATATCCCTAATTCAAACACTCAATTTGTT
GGTGATGAAAACCGACCTCCTGCTCAAGTTTTTCGTGACAAAATTATGTCAATGGCTGAT
GTTGGTGCCGGAGGTGAGGAAGCTGTTGTCACATTTGACGGCATTGCCATACTTACTCCA
AGGGGTCGTTACAATGTGGAGCTTCATCTCTCATTCTTGCGCTTGCAAGGGCAAGCCAAT
GACTTTAAAATTCAGTACAGCAGCGTAGTCCGTATTTTTTTGTTGCCGAAGCATAACCAA
CCACACACTTTAGTAGTTATCACTCTTGATCCTCCGATTAGGAAGGGCCAAACTTTGTAT
CCACACATTGTATTGCAGTTTGAGACGGACAATGTGGTGGACCTTTCGCTGGCTTTAAGC
GAAGACCTTCTGAATACAAAATACAAGGAGAGGCTGCTAACGGGTTACAAAGGTCTAATC
CATGACATCTTTACTCAAATTTTACGCGGCTTGTCTGGTTCCAAAGTTACTAAACCCGGG
AAGTTCCGTAGCAGTCAAGATGGGTATGCGGTGAAATCCTCATTGAAGGCTGAAGATGGA
CTCCTCTATCCTCTTGAGAAGAGCTTCTTCTTTTTACCTAAACCTCCAACTCTTATACTG
CATGAGGAGATTGATTATGTGGAATTTGAGAGGCACGCTGCGGGCACGGCCAACATGCAT
TACTTTGATCTTCTCATCAGACTGAAAACTGAACAAGAACATCTTTTCCGGAATATCCAG
AGAAATGAGTACCACAATCTTTTTGATTTCATCAGTGGAAAGGGTCTGAAAATAATGAAC
CTTAATGAAGCTCGGGCTACAGAAGGTGTTCCTGTTTTGCCCGATGATGACGATGATGCT
GTTGATCCACATCTTGAGCGTATTAAGAATGAAGCGGGTGGGGATGACAGTGATGAAGAG
GACGAAGATTTTGTCCTCGATAGAGATGATGGAGGGTCTCCTACTGATGATTCTGGAGGG
GATGAATCTGATGCCAGTGGTAGTGGTGGTGAGGAGGAGAAACCTGCAAAGAAGAAGCCA
AAAAAGGAGGGTACTGTGTCAAAGCCATCTACAAGCAGGAAAAAGGCAGATGATGATGGA
TCGAAGAAGAAAAAACAGAAAAAGAAGAAGGATCCAAATGCTCCAAAGAGGGCAATTAGT
GCTTTCATGTACTTCTCGCAGAGTGAAAGGGAGAATGTGAAGAAAAGTAATCCTGGAATC
GCCTTCACTGAAGTAGGGAGGGTTCTTGGAGAGAGATGGAATAAGCTGTCAGCTGAGGAG
AAAGAACCCTTTGAGGCCTTGGCCAAGGCAGATAAGAAACGCTACAGCGAACAGATCAGT
GATTACAAGAACCCTCAGCCGACTGTCGTGGATTCAGGGAATGAATCTGGGAGTTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031536
PEP Infomation

pacid=37458921 transcript=PGSC0003DMT400046614 locus=PGSC0003DMG400018099 ID=PGSC0003DMT400046614.v4.03 annot-version=v4.03
Sequence

MTDGHQFNNISLGGRGGTNTGQLKVQSGGILWKKQGGGKAVEVDKEDIVGLTWMKVPRSN
QLGVRIKDGLYYKFTGFRDQDVASLTTYFQSSCGISPEEKQLSISGKNWGEVDLNANMLA
FLVGNKQAFEISLADVSQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFDGIAILTPRGRYNVELHLSFLRLQGQAN
DFKIQYSSVVRIFLLPKHNQPHTLVVITLDPPIRKGQTLYPHIVLQFETDNVVDLSLALS
EDLLNTKYKERLLTGYKGLIHDIFTQILRGLSGSKVTKPGKFRSSQDGYAVKSSLKAEDG
LLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGTANMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLNEARATEGVPVLPDDDDDAVDPHLERIKNEAGGDDSDEE
DEDFVLDRDDGGSPTDDSGGDESDASGSGGEEEKPAKKKPKKEGTVSKPSTSRKKADDDG
SKKKKQKKKKDPNAPKRAISAFMYFSQSERENVKKSNPGIAFTEVGRVLGERWNKLSAEE
KEPFEALAKADKKRYSEQISDYKNPQPTVVDSGNESGSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400046614
Transcript Infomation

pacid=37458921 locus=PGSC0003DMG400018099 ID=PGSC0003DMT400046614.v4.03 annot-version=v4.03
Sequence

ATGACGGACGGTCATCAGTTCAACAACATCTCTCTCGGTGGCCGTGGAGGCACCAATACA
GGGCAGCTTAAGGTTCAGTCTGGAGGTATATTATGGAAGAAACAAGGTGGTGGTAAGGCT
GTGGAAGTTGACAAGGAAGATATAGTGGGCCTTACTTGGATGAAAGTTCCTCGAAGTAAT
CAGCTGGGTGTGCGAATTAAGGATGGTCTTTACTACAAATTTACTGGTTTTCGTGACCAG
GATGTTGCGAGTTTGACCACCTATTTCCAGAGTTCTTGCGGGATATCTCCGGAGGAAAAG
CAGCTATCAATTAGTGGAAAAAATTGGGGAGAAGTTGATCTAAATGCGAATATGCTCGCT
TTTCTTGTTGGTAATAAGCAAGCATTTGAGATATCATTGGCAGACGTTTCTCAAACACAG
CTTCAAGGAAAAAATGATGTCATGTTGGAGTTCCATGTAGATGATACAACTGGGGCTAAT
GAAAAAGACTCCCTGATGGAAATCAGCTTTCATATCCCTAATTCAAACACTCAATTTGTT
GGTGATGAAAACCGACCTCCTGCTCAAGTTTTTCGTGACAAAATTATGTCAATGGCTGAT
GTTGGTGCCGGAGGTGAGGAAGCTGTTGTCACATTTGACGGCATTGCCATACTTACTCCA
AGGGGTCGTTACAATGTGGAGCTTCATCTCTCATTCTTGCGCTTGCAAGGGCAAGCCAAT
GACTTTAAAATTCAGTACAGCAGCGTAGTCCGTATTTTTTTGTTGCCGAAGCATAACCAA
CCACACACTTTAGTAGTTATCACTCTTGATCCTCCGATTAGGAAGGGCCAAACTTTGTAT
CCACACATTGTATTGCAGTTTGAGACGGACAATGTGGTGGACCTTTCGCTGGCTTTAAGC
GAAGACCTTCTGAATACAAAATACAAGGAGAGGCTGCTAACGGGTTACAAAGGTCTAATC
CATGACATCTTTACTCAAATTTTACGCGGCTTGTCTGGTTCCAAAGTTACTAAACCCGGG
AAGTTCCGTAGCAGTCAAGATGGGTATGCGGTGAAATCCTCATTGAAGGCTGAAGATGGA
CTCCTCTATCCTCTTGAGAAGAGCTTCTTCTTTTTACCTAAACCTCCAACTCTTATACTG
CATGAGGAGATTGATTATGTGGAATTTGAGAGGCACGCTGCGGGCACGGCCAACATGCAT
TACTTTGATCTTCTCATCAGACTGAAAACTGAACAAGAACATCTTTTCCGGAATATCCAG
AGAAATGAGTACCACAATCTTTTTGATTTCATCAGTGGAAAGGGTCTGAAAATAATGAAC
CTTAATGAAGCTCGGGCTACAGAAGGTGTTCCTGTTTTGCCCGATGATGACGATGATGCT
GTTGATCCACATCTTGAGCGTATTAAGAATGAAGCGGGTGGGGATGACAGTGATGAAGAG
GACGAAGATTTTGTCCTCGATAGAGATGATGGAGGGTCTCCTACTGATGATTCTGGAGGG
GATGAATCTGATGCCAGTGGTAGTGGTGGTGAGGAGGAGAAACCTGCAAAGAAGAAGCCA
AAAAAGGAGGGTACTGTGTCAAAGCCATCTACAAGCAGGAAAAAGGCAGATGATGATGGA
TCGAAGAAGAAAAAACAGAAAAAGAAGAAGGATCCAAATGCTCCAAAGAGGGCAATTAGT
GCTTTCATGTACTTCTCGCAGAGTGAAAGGGAGAATGTGAAGAAAAGTAATCCTGGAATC
GCCTTCACTGAAGTAGGGAGGGTTCTTGGAGAGAGATGGAATAAGCTGTCAGCTGAGGAG
AAAGAACCCTTTGAGGCCTTGGCCAAGGCAGATAAGAAACGCTACAGCGAACAGATCAGT
GATTACAAGAACCCTCAGCCGACTGTCGTGGATTCAGGGAATGAATCTGGGAGTTCTTAA