Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046612
CDS Infomation

pacid=37460380 polypeptide=PGSC0003DMP400031534 locus=PGSC0003DMG400018098 ID=PGSC0003DMT400046612.v4.03 annot-version=v4.03
Sequence

ATGCCTCCGGCCACCGTCGTCGCCGGCGTTCTCCTCTTCCTCCTCCTTCAACTCTTCATC
ACCGCCACCATCTCCGCCCCAATCCTGGGATTAGACTCCTTCCTCAACCAACAATCCCGG
GTTGACCCGACAGCCACAAACGATTCATTCCTCTCTCTTCCTTCTTCTCTGAAGAAGCAT
CTCTCTCAACCCTCCATACATCACCCACCCATCCCTTCTTCTCTCCTCACCCTACAAGTT
TCCGTCCCCATCACTGTCAAGCTTGTTGGTAGCAACTTCTCTTCTTCTGCCAAATCTCAG
CTTTCTTCATTTCTCACATCGGCAATTTCTTCCGATCAGTTCCACGTCATCACCCCTTTC
TCTTTTCAACCATCTCATCACCTCTCTATATCCCATTCACTTCATCTTGATGTGACTCTT
TCTCCTTCCTCTCTGTCTTCACGTCTCTCTGAAATCCTCAAGACCCATCTCGCCTCTGTA
CCTTCCTCTTTCAGATCCGTGCTTGCTTCTGTCCCTCACTCGATAGTTGATGAAATTATC
AAACAAGATTTTGAAAAAGAGAAACCCATTAGTGGGATTTACATATATATTCTCAATTTG
GGCTCCCAATCGAAACCCTATGCTTATAGCTATACACCTGGCGATCCATCCCCCGCTTTC
ACCAAGTGTTTGGGCACTGTGTGGACCGGAAAAGAACGGTATTTGTGGATTGATTTGGGG
GCCGGTCCGGTTGATTATGGCCCGGCGTTGTCCGGCGATGGTGTACTTCCTCGTGGCGAG
TTTCATCCATTTGCTACATTGCACGGACGACCCAAGTCCCAAAAGGCGCTGCTTTCGGAT
TTGGCCTCACTGGTTTGGAGTGCTTATCAGGTTCTTCTCGTGCCCTCTTTGCGAATCCCT
ATCCCGTTTGAGAATTCTTTGATTGTTGAGTTTATACACATATATGCTTCTTCGGATAAT
AAGGATACCGTTGGGTTAGATTGGAAGTTGGTAGAGAGGAATTTTATGGATGAAGTAAAT
GAGAATGGGTTGTTGTTTGGAGATCAATCTTTGAGATTTAAGAAGTATGAAGTGAATTTA
GCAGAGTGCCCTATTTGTTCGTTTGCCATTTCAAGGGCAGCTACCTCATATACTTCTAGG
TACCTGTTTGATAACTATACACTGATTGTCAGTGAATACCTGGACTCTAAGCGTTTACAC
CAGACATTGTCTGAATCGGCTGCTGAGTTTAGGCGGATTGCTAAGGTTCCTGAGGAGGAC
TTTGGTGGAAGGATACTTCCGGTTTATGTTTTTGATTTGGATGTCAGTTCGATTCTGATG
CTTGATCGTTATCATCAGTCTGTGGCTTTTAAGGATATGGTTATAGCAGTCAGGACAAAG
AGTACACAGACTGTGAGTGATTATAGCTGTAATGGGCGTCATGTCTTTACCCAGACTCGT
GAATTAGAGAGGCCCATTGTAGGTTCCATCTTACAGAGCATGTGGGGAGTCTCACCAACA
CATTTAGTCTGGAGCCCAAGACACAACAGTACTCTAGTAGACTATACATGGAGTGTCGGG
CAAACACCATTTGGGCCATTTTCGGAGGTTTCTTCGTTGTCATTTGTGCAGAAGGATGCT
GCTAGGAGAAATGTATTGTTGACATCGCTGAACTTCAGTATTTCTAGTGCTCTTGAAGTT
CTTGAATCCATTTCTGCACATGGCGGGGAGAGAAAGCTTCTTAAGCATAATCAGCTTACT
GAGTTCATGCAAAGGTGGAACTTGTTCAAGTACAAGCTAGACAAAGCAGTTTCAGCACTC
TCACACTTTGACTTTGAAATGGCTTTGTATTACCTGCGGGCATCAGATCATGACATATAT
GCCATTCATTCTCTTGTTTATCATGCTTCTCAAGAGCTGGAAGCATCGCTAGTCTGTTTC
AAGGACCCACCATTTCCCTGGGCGTCAGTTTCTATGTCTGCTGGAGTTTTTATTTTCCTT
GTGTATGTTTGGGCAAAGAGAGACAAGTTCTTTTCCAACAAGCGAAAACAATTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031534
PEP Infomation

pacid=37460380 transcript=PGSC0003DMT400046612 locus=PGSC0003DMG400018098 ID=PGSC0003DMT400046612.v4.03 annot-version=v4.03
Sequence

MPPATVVAGVLLFLLLQLFITATISAPILGLDSFLNQQSRVDPTATNDSFLSLPSSLKKH
LSQPSIHHPPIPSSLLTLQVSVPITVKLVGSNFSSSAKSQLSSFLTSAISSDQFHVITPF
SFQPSHHLSISHSLHLDVTLSPSSLSSRLSEILKTHLASVPSSFRSVLASVPHSIVDEII
KQDFEKEKPISGIYIYILNLGSQSKPYAYSYTPGDPSPAFTKCLGTVWTGKERYLWIDLG
AGPVDYGPALSGDGVLPRGEFHPFATLHGRPKSQKALLSDLASLVWSAYQVLLVPSLRIP
IPFENSLIVEFIHIYASSDNKDTVGLDWKLVERNFMDEVNENGLLFGDQSLRFKKYEVNL
AECPICSFAISRAATSYTSRYLFDNYTLIVSEYLDSKRLHQTLSESAAEFRRIAKVPEED
FGGRILPVYVFDLDVSSILMLDRYHQSVAFKDMVIAVRTKSTQTVSDYSCNGRHVFTQTR
ELERPIVGSILQSMWGVSPTHLVWSPRHNSTLVDYTWSVGQTPFGPFSEVSSLSFVQKDA
ARRNVLLTSLNFSISSALEVLESISAHGGERKLLKHNQLTEFMQRWNLFKYKLDKAVSAL
SHFDFEMALYYLRASDHDIYAIHSLVYHASQELEASLVCFKDPPFPWASVSMSAGVFIFL
VYVWAKRDKFFSNKRKQF*

Transcript Sequence

Transcript ID

PGSC0003DMT400046612
Transcript Infomation

pacid=37460380 locus=PGSC0003DMG400018098 ID=PGSC0003DMT400046612.v4.03 annot-version=v4.03
Sequence

ATGCCTCCGGCCACCGTCGTCGCCGGCGTTCTCCTCTTCCTCCTCCTTCAACTCTTCATC
ACCGCCACCATCTCCGCCCCAATCCTGGGATTAGACTCCTTCCTCAACCAACAATCCCGG
GTTGACCCGACAGCCACAAACGATTCATTCCTCTCTCTTCCTTCTTCTCTGAAGAAGCAT
CTCTCTCAACCCTCCATACATCACCCACCCATCCCTTCTTCTCTCCTCACCCTACAAGTT
TCCGTCCCCATCACTGTCAAGCTTGTTGGTAGCAACTTCTCTTCTTCTGCCAAATCTCAG
CTTTCTTCATTTCTCACATCGGCAATTTCTTCCGATCAGTTCCACGTCATCACCCCTTTC
TCTTTTCAACCATCTCATCACCTCTCTATATCCCATTCACTTCATCTTGATGTGACTCTT
TCTCCTTCCTCTCTGTCTTCACGTCTCTCTGAAATCCTCAAGACCCATCTCGCCTCTGTA
CCTTCCTCTTTCAGATCCGTGCTTGCTTCTGTCCCTCACTCGATAGTTGATGAAATTATC
AAACAAGATTTTGAAAAAGAGAAACCCATTAGTGGGATTTACATATATATTCTCAATTTG
GGCTCCCAATCGAAACCCTATGCTTATAGCTATACACCTGGCGATCCATCCCCCGCTTTC
ACCAAGTGTTTGGGCACTGTGTGGACCGGAAAAGAACGGTATTTGTGGATTGATTTGGGG
GCCGGTCCGGTTGATTATGGCCCGGCGTTGTCCGGCGATGGTGTACTTCCTCGTGGCGAG
TTTCATCCATTTGCTACATTGCACGGACGACCCAAGTCCCAAAAGGCGCTGCTTTCGGAT
TTGGCCTCACTGGTTTGGAGTGCTTATCAGGTTCTTCTCGTGCCCTCTTTGCGAATCCCT
ATCCCGTTTGAGAATTCTTTGATTGTTGAGTTTATACACATATATGCTTCTTCGGATAAT
AAGGATACCGTTGGGTTAGATTGGAAGTTGGTAGAGAGGAATTTTATGGATGAAGTAAAT
GAGAATGGGTTGTTGTTTGGAGATCAATCTTTGAGATTTAAGAAGTATGAAGTGAATTTA
GCAGAGTGCCCTATTTGTTCGTTTGCCATTTCAAGGGCAGCTACCTCATATACTTCTAGG
TACCTGTTTGATAACTATACACTGATTGTCAGTGAATACCTGGACTCTAAGCGTTTACAC
CAGACATTGTCTGAATCGGCTGCTGAGTTTAGGCGGATTGCTAAGGTTCCTGAGGAGGAC
TTTGGTGGAAGGATACTTCCGGTTTATGTTTTTGATTTGGATGTCAGTTCGATTCTGATG
CTTGATCGTTATCATCAGTCTGTGGCTTTTAAGGATATGGTTATAGCAGTCAGGACAAAG
AGTACACAGACTGTGAGTGATTATAGCTGTAATGGGCGTCATGTCTTTACCCAGACTCGT
GAATTAGAGAGGCCCATTGTAGGTTCCATCTTACAGAGCATGTGGGGAGTCTCACCAACA
CATTTAGTCTGGAGCCCAAGACACAACAGTACTCTAGTAGACTATACATGGAGTGTCGGG
CAAACACCATTTGGGCCATTTTCGGAGGTTTCTTCGTTGTCATTTGTGCAGAAGGATGCT
GCTAGGAGAAATGTATTGTTGACATCGCTGAACTTCAGTATTTCTAGTGCTCTTGAAGTT
CTTGAATCCATTTCTGCACATGGCGGGGAGAGAAAGCTTCTTAAGCATAATCAGCTTACT
GAGTTCATGCAAAGGTGGAACTTGTTCAAGTACAAGCTAGACAAAGCAGTTTCAGCACTC
TCACACTTTGACTTTGAAATGGCTTTGTATTACCTGCGGGCATCAGATCATGACATATAT
GCCATTCATTCTCTTGTTTATCATGCTTCTCAAGAGCTGGAAGCATCGCTAGTCTGTTTC
AAGGACCCACCATTTCCCTGGGCGTCAGTTTCTATGTCTGCTGGAGTTTTTATTTTCCTT
GTGTATGTTTGGGCAAAGAGAGACAAGTTCTTTTCCAACAAGCGAAAACAATTTTGA