Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046606
CDS Infomation

pacid=37463162 polypeptide=PGSC0003DMP400031531 locus=PGSC0003DMG400018096 ID=PGSC0003DMT400046606.v4.03 annot-version=v4.03
Sequence

ATGGCAACCGACGACAACCAAAATGCTGGCGGCGTTAATGCCCTCCGGCGGCTTAAATCA
ACTGAACCACCTCTTTATCTTTCAGCATCACCGGAGCTCTCCGAAGCCGCTCGATTAGCT
TCTAAGTACCTATACTCTTCTCTCAAACCCTACACTCCGAAGTCGCCCTTCGCACAGCTC
TTGACAGATGGTTTTGATGCCGAACAAATATGGCAGCAAATTGACCTTCAATCCGAGCCC
TTACTTACCTCCCTCGGTCGTCAAATCAGACAATTTGAGAAGAAACCGGAAGAAATTTCA
AAGAGTTTTAATTTAGGTTCAGGTAACAGTGGAAAAAAGAATAATTTAGAGAGGGAGAAA
GAGGAACTGGCATTGGATGGAGAAAGTGAAGACTTTAAAGATGTAGATATGAATGATTCT
GATGATGAGGAGGAGGACGAGGAGGAGGAGGTAGATGAAGAAGAGGAGGGTGATGATGGT
GAGAAGAGTGAAGACGTGGAGGAGAAGGAGGAGAATGGTGGGGTAGGGGGAGTGGAAGAT
AAGTTTTTCAAGATAGATGAGTTGGAAGAGTATATGGAGTATGATGAAGCAAGGGAGTAT
GGATTGAAGGGAAAGACTAAGAAGATAAGAAGTAACAAGAAAAAGGAGGAGGAAGAGGAA
GAAGATGGTGAAGAAGGCGACGAGGAGGACGAAGAGGAAGATGACGAGCTTGGGTTAATG
GGCCTCGGAGATGATGAAGATGAAGGTACAGAAATTGCCAGATATGAGGACTTTTTTGGT
TCGAAAAAGGGTACTGGACAGAAGAAAACTGTTAAATCATCGGATCTATCAGATGACATG
GGAACCGATGATGACATGATTGATGATAATGATGACAATCAGAAGAAGCAAAGACTTTCT
ACCCATGAAAAAGAGCTTGAAAAACTCCGATCTACAATTGAGGATATGGAGAAAGCAAAC
TTGGAAGAGAAGTCCTGGACTATGCAAGGAGAAGTAACTGCTGCAAGAAGGCCAAAGAAT
AGTGCATTGGAAGTTGATCTGGATTTTGAACACAATGTGAGACCTCCCCCTGTAATCACT
GAAGAGGTTACTGCAACACTTGAAGAAATAATTCAGAAACGTATCATTGAGGGCCGATTT
GATGATGTTCAGAAACGTCCTAGCTTGCCATCCAGAGCACCGCGAGAAACAAAAGAACTG
GATGACAATAAAAGCAAAAAGGGACTTGGCGAAATTTATGAGGAGGAATATGTCCAGAAG
ACTGGCCTTGTGTCAACAGCAATATCCTTCTCAGATGAGCAGAAAAAAGAGGCCACTATG
CTGTTTAAGAAACTGTGCTTGAAGTTGGATGCTCTGTCTCATTTCCACTTCACTCCAAAA
CCGGTGATAGAAGATATGTCTATACAAGCAAATGTCCCTGCACTTGCAATGGAAGAGATT
GCACCTATGGCGGTCTCTGATGCTGCTATGCTGGCTCCTGAGGAAGTATTTACTGGCAAA
GGAGATGTTAAAGAAGAAACAGAGTTGACACAAGCAGAGAGAAAAAGGAGGAGGGCGAAC
AAGAAAAGGAAATTTAAAGCTGAGTCAGCAAAAAGAACAGTAAAGCCGGCACCAGAAAAT
ACACTAACTAATGGTGTTGAGGGTAATGATAAGTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400031531
PEP Infomation

pacid=37463162 transcript=PGSC0003DMT400046606 locus=PGSC0003DMG400018096 ID=PGSC0003DMT400046606.v4.03 annot-version=v4.03
Sequence

MATDDNQNAGGVNALRRLKSTEPPLYLSASPELSEAARLASKYLYSSLKPYTPKSPFAQL
LTDGFDAEQIWQQIDLQSEPLLTSLGRQIRQFEKKPEEISKSFNLGSGNSGKKNNLEREK
EELALDGESEDFKDVDMNDSDDEEEDEEEEVDEEEEGDDGEKSEDVEEKEENGGVGGVED
KFFKIDELEEYMEYDEAREYGLKGKTKKIRSNKKKEEEEEEDGEEGDEEDEEEDDELGLM
GLGDDEDEGTEIARYEDFFGSKKGTGQKKTVKSSDLSDDMGTDDDMIDDNDDNQKKQRLS
THEKELEKLRSTIEDMEKANLEEKSWTMQGEVTAARRPKNSALEVDLDFEHNVRPPPVIT
EEVTATLEEIIQKRIIEGRFDDVQKRPSLPSRAPRETKELDDNKSKKGLGEIYEEEYVQK
TGLVSTAISFSDEQKKEATMLFKKLCLKLDALSHFHFTPKPVIEDMSIQANVPALAMEEI
APMAVSDAAMLAPEEVFTGKGDVKEETELTQAERKRRRANKKRKFKAESAKRTVKPAPEN
TLTNGVEGNDKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400046606
Transcript Infomation

pacid=37463162 locus=PGSC0003DMG400018096 ID=PGSC0003DMT400046606.v4.03 annot-version=v4.03
Sequence

ATGGCAACCGACGACAACCAAAATGCTGGCGGCGTTAATGCCCTCCGGCGGCTTAAATCA
ACTGAACCACCTCTTTATCTTTCAGCATCACCGGAGCTCTCCGAAGCCGCTCGATTAGCT
TCTAAGTACCTATACTCTTCTCTCAAACCCTACACTCCGAAGTCGCCCTTCGCACAGCTC
TTGACAGATGGTTTTGATGCCGAACAAATATGGCAGCAAATTGACCTTCAATCCGAGCCC
TTACTTACCTCCCTCGGTCGTCAAATCAGACAATTTGAGAAGAAACCGGAAGAAATTTCA
AAGAGTTTTAATTTAGGTTCAGGTAACAGTGGAAAAAAGAATAATTTAGAGAGGGAGAAA
GAGGAACTGGCATTGGATGGAGAAAGTGAAGACTTTAAAGATGTAGATATGAATGATTCT
GATGATGAGGAGGAGGACGAGGAGGAGGAGGTAGATGAAGAAGAGGAGGGTGATGATGGT
GAGAAGAGTGAAGACGTGGAGGAGAAGGAGGAGAATGGTGGGGTAGGGGGAGTGGAAGAT
AAGTTTTTCAAGATAGATGAGTTGGAAGAGTATATGGAGTATGATGAAGCAAGGGAGTAT
GGATTGAAGGGAAAGACTAAGAAGATAAGAAGTAACAAGAAAAAGGAGGAGGAAGAGGAA
GAAGATGGTGAAGAAGGCGACGAGGAGGACGAAGAGGAAGATGACGAGCTTGGGTTAATG
GGCCTCGGAGATGATGAAGATGAAGGTACAGAAATTGCCAGATATGAGGACTTTTTTGGT
TCGAAAAAGGGTACTGGACAGAAGAAAACTGTTAAATCATCGGATCTATCAGATGACATG
GGAACCGATGATGACATGATTGATGATAATGATGACAATCAGAAGAAGCAAAGACTTTCT
ACCCATGAAAAAGAGCTTGAAAAACTCCGATCTACAATTGAGGATATGGAGAAAGCAAAC
TTGGAAGAGAAGTCCTGGACTATGCAAGGAGAAGTAACTGCTGCAAGAAGGCCAAAGAAT
AGTGCATTGGAAGTTGATCTGGATTTTGAACACAATGTGAGACCTCCCCCTGTAATCACT
GAAGAGGTTACTGCAACACTTGAAGAAATAATTCAGAAACGTATCATTGAGGGCCGATTT
GATGATGTTCAGAAACGTCCTAGCTTGCCATCCAGAGCACCGCGAGAAACAAAAGAACTG
GATGACAATAAAAGCAAAAAGGGACTTGGCGAAATTTATGAGGAGGAATATGTCCAGAAG
ACTGGCCTTGTGTCAACAGCAATATCCTTCTCAGATGAGCAGAAAAAAGAGGCCACTATG
CTGTTTAAGAAACTGTGCTTGAAGTTGGATGCTCTGTCTCATTTCCACTTCACTCCAAAA
CCGGTGATAGAAGATATGTCTATACAAGCAAATGTCCCTGCACTTGCAATGGAAGAGATT
GCACCTATGGCGGTCTCTGATGCTGCTATGCTGGCTCCTGAGGAAGTATTTACTGGCAAA
GGAGATGTTAAAGAAGAAACAGAGTTGACACAAGCAGAGAGAAAAAGGAGGAGGGCGAAC
AAGAAAAGGAAATTTAAAGCTGAGTCAGCAAAAAGAACAGTAAAGCCGGCACCAGAAAAT
ACACTAACTAATGGTGTTGAGGGTAATGATAAGTCATAA