Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046597
CDS Infomation

pacid=37463397 polypeptide=PGSC0003DMP400031523 locus=PGSC0003DMG400018089 ID=PGSC0003DMT400046597.v4.03 annot-version=v4.03
Sequence

ATGCGGAGTGTTGCCATCAGAACACTGAAGTTAACTGAAGAGACACTAAGATTAGTAGCA
AAAACACATCCTCAGTGGACACAACTTGTGTCAGCAGTTGATCATAGAGTTGATCGATCT
CTAGCCATTTTAAGACCTCAGGCCATTGCAGATCACAGATCCCTTCTGACTTCCCTTGGC
TGGCCACCACCTCTGTCCACTTTAAATTCCTTAGGCCCAGAGTCAAAGCGGTCAACTGAT
TCCCAGAGCCCACTTTTCACAATGAAAGGGGACCTTAAACAGCAATATTGTGATAGTTTT
CTAGCATTGTGCAGTCTGCAGGAACTGCAGCGCCAAAGAAAATCTCGTCAACTCGAAGGA
CAGAATAGAGAAATTGCCTTGCACCAGCCACTTTGGGCCATTGAAGAGCTTGTTAATCCT
ATATCAGTTGCATCTCAGCGCCACTTCTCCAAATGGGTTGATAAACCAGAGTACATATTT
GCCCTTGTATACAAGGTGACCCGGGATTATGTTGATTCAATGGACGAGTTACTGCAGCCA
CTGGTGGATGAGGCAATGCTGTCAGGTTACAGTTGCAGAGAAGAATGGATCTCAGCTATG
GTTACTTCTCTATCGACATACTTGGCAAAAGAAATATTCCCCATGTATGTTAGTCAGCTG
GACGAAGAGAGCACAAGTGAAAAACACTTGCAGGCTAGAATATCCTGGCTCCATCTTATT
GATCAGATGATAGCATTTGATAAGCGAGTTCAGTCTCTTGCTTCACACTCGGGTATCTTG
CTTTCTTTGCAGGAAGATGCAAAACTAGAGAAACTTTCATCATTTTCTGTATTTATTGAC
AGGCCTGATTGGCTTGACTTGTGGGCTGATATAGAACTTACTGATGCATTTGATAAATTG
AATCCTGAGATTGAGAATGAAAGAAGTTGGTCGACAGACATTCGTGGAGTGGCTGTTCTA
TCTGCCCAAGAAGACAACAAGTCTCCAGCAATTGCCAGTGCCTTTCATCAGCGTTTTTCG
GCTGTTATTGATCGTTGTCGATCACTGCCTAGCATAGAGTTGAGATCGAGATTTTTGAAA
TTGGCAGGTGCACCTATAATACACAGGTTTTTGGGTTGTTTGCTTTTCAGGTGCCAAGAA
GCTGAAGGGTTAACTGCCTTGACAGATAATGATGCTTTGATGAAAGTTGCAAAGTCTGTA
AACGCTGCACGCTATTTCGAGTCTATTTTAAAGGAATGGTGTGAGGATATCTTTTTTCTT
GAGATGGGGCTGAACCAGGACACATCTACTGATGGAAATGACTTTGGTTCAGAGGAATCA
TCTGGAAATGGAATTCTTTATGAAGAAATTAAGAAGTTGGAAGAATTTAGAACAGGATGG
GTTGAGAAGCTGTCTACGGTAGTAATGAGGGGATTCGATGTCTGCTGCAGAGACTATCTA
AAGAACAAGAAGCAATGGCAGGAAAAAGGTGAAGAAGGGTGGATGGTATCCCAGTCTTTC
GTTGGGGCACTAGATTATCTGCAGGGAAAGATGTCAATACTTGAAGAAGGTTTGAATAGA
GTGGACTTTGTTGGGATCTGGAGGAGTTTAGCCCCTGGGCTGGACAAGTTAATTTTTAAT
GGTATTTTGATGACCAATGCTAAGTTTTCTGACGGCGGAGTTGAGAGGCTTAGCAATGAT
TTGTCAGTTTTATTCGGGGTGTTCGGAGCTTGGTGCTTAAGACCTGAAGGTTTCTTCCCC
AAATTGAGTGAAGGTATGAAGCTATTGAAAATGGGAAAGAAGCAGCTCCAGAATTGTTTA
GCAGGAGGTGAAATATGGTTGAAAGAGAATGGGATAAGACATTTGACAGCCGCCGAGTCC
GAAAAAATAGCGAAGAATAGGATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400031523
PEP Infomation

pacid=37463397 transcript=PGSC0003DMT400046597 locus=PGSC0003DMG400018089 ID=PGSC0003DMT400046597.v4.03 annot-version=v4.03
Sequence

MRSVAIRTLKLTEETLRLVAKTHPQWTQLVSAVDHRVDRSLAILRPQAIADHRSLLTSLG
WPPPLSTLNSLGPESKRSTDSQSPLFTMKGDLKQQYCDSFLALCSLQELQRQRKSRQLEG
QNREIALHQPLWAIEELVNPISVASQRHFSKWVDKPEYIFALVYKVTRDYVDSMDELLQP
LVDEAMLSGYSCREEWISAMVTSLSTYLAKEIFPMYVSQLDEESTSEKHLQARISWLHLI
DQMIAFDKRVQSLASHSGILLSLQEDAKLEKLSSFSVFIDRPDWLDLWADIELTDAFDKL
NPEIENERSWSTDIRGVAVLSAQEDNKSPAIASAFHQRFSAVIDRCRSLPSIELRSRFLK
LAGAPIIHRFLGCLLFRCQEAEGLTALTDNDALMKVAKSVNAARYFESILKEWCEDIFFL
EMGLNQDTSTDGNDFGSEESSGNGILYEEIKKLEEFRTGWVEKLSTVVMRGFDVCCRDYL
KNKKQWQEKGEEGWMVSQSFVGALDYLQGKMSILEEGLNRVDFVGIWRSLAPGLDKLIFN
GILMTNAKFSDGGVERLSNDLSVLFGVFGAWCLRPEGFFPKLSEGMKLLKMGKKQLQNCL
AGGEIWLKENGIRHLTAAESEKIAKNRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400046597
Transcript Infomation

pacid=37463397 locus=PGSC0003DMG400018089 ID=PGSC0003DMT400046597.v4.03 annot-version=v4.03
Sequence

ATGCGGAGTGTTGCCATCAGAACACTGAAGTTAACTGAAGAGACACTAAGATTAGTAGCA
AAAACACATCCTCAGTGGACACAACTTGTGTCAGCAGTTGATCATAGAGTTGATCGATCT
CTAGCCATTTTAAGACCTCAGGCCATTGCAGATCACAGATCCCTTCTGACTTCCCTTGGC
TGGCCACCACCTCTGTCCACTTTAAATTCCTTAGGCCCAGAGTCAAAGCGGTCAACTGAT
TCCCAGAGCCCACTTTTCACAATGAAAGGGGACCTTAAACAGCAATATTGTGATAGTTTT
CTAGCATTGTGCAGTCTGCAGGAACTGCAGCGCCAAAGAAAATCTCGTCAACTCGAAGGA
CAGAATAGAGAAATTGCCTTGCACCAGCCACTTTGGGCCATTGAAGAGCTTGTTAATCCT
ATATCAGTTGCATCTCAGCGCCACTTCTCCAAATGGGTTGATAAACCAGAGTACATATTT
GCCCTTGTATACAAGGTGACCCGGGATTATGTTGATTCAATGGACGAGTTACTGCAGCCA
CTGGTGGATGAGGCAATGCTGTCAGGTTACAGTTGCAGAGAAGAATGGATCTCAGCTATG
GTTACTTCTCTATCGACATACTTGGCAAAAGAAATATTCCCCATGTATGTTAGTCAGCTG
GACGAAGAGAGCACAAGTGAAAAACACTTGCAGGCTAGAATATCCTGGCTCCATCTTATT
GATCAGATGATAGCATTTGATAAGCGAGTTCAGTCTCTTGCTTCACACTCGGGTATCTTG
CTTTCTTTGCAGGAAGATGCAAAACTAGAGAAACTTTCATCATTTTCTGTATTTATTGAC
AGGCCTGATTGGCTTGACTTGTGGGCTGATATAGAACTTACTGATGCATTTGATAAATTG
AATCCTGAGATTGAGAATGAAAGAAGTTGGTCGACAGACATTCGTGGAGTGGCTGTTCTA
TCTGCCCAAGAAGACAACAAGTCTCCAGCAATTGCCAGTGCCTTTCATCAGCGTTTTTCG
GCTGTTATTGATCGTTGTCGATCACTGCCTAGCATAGAGTTGAGATCGAGATTTTTGAAA
TTGGCAGGTGCACCTATAATACACAGGTTTTTGGGTTGTTTGCTTTTCAGGTGCCAAGAA
GCTGAAGGGTTAACTGCCTTGACAGATAATGATGCTTTGATGAAAGTTGCAAAGTCTGTA
AACGCTGCACGCTATTTCGAGTCTATTTTAAAGGAATGGTGTGAGGATATCTTTTTTCTT
GAGATGGGGCTGAACCAGGACACATCTACTGATGGAAATGACTTTGGTTCAGAGGAATCA
TCTGGAAATGGAATTCTTTATGAAGAAATTAAGAAGTTGGAAGAATTTAGAACAGGATGG
GTTGAGAAGCTGTCTACGGTAGTAATGAGGGGATTCGATGTCTGCTGCAGAGACTATCTA
AAGAACAAGAAGCAATGGCAGGAAAAAGGTGAAGAAGGGTGGATGGTATCCCAGTCTTTC
GTTGGGGCACTAGATTATCTGCAGGGAAAGATGTCAATACTTGAAGAAGGTTTGAATAGA
GTGGACTTTGTTGGGATCTGGAGGAGTTTAGCCCCTGGGCTGGACAAGTTAATTTTTAAT
GGTATTTTGATGACCAATGCTAAGTTTTCTGACGGCGGAGTTGAGAGGCTTAGCAATGAT
TTGTCAGTTTTATTCGGGGTGTTCGGAGCTTGGTGCTTAAGACCTGAAGGTTTCTTCCCC
AAATTGAGTGAAGGTATGAAGCTATTGAAAATGGGAAAGAAGCAGCTCCAGAATTGTTTA
GCAGGAGGTGAAATATGGTTGAAAGAGAATGGGATAAGACATTTGACAGCCGCCGAGTCC
GAAAAAATAGCGAAGAATAGGATATAA