Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046552
CDS Infomation

pacid=37429372 polypeptide=PGSC0003DMP400031491 locus=PGSC0003DMG400018074 ID=PGSC0003DMT400046552.v4.03 annot-version=v4.03
Sequence

ATGTCTGCTTCTTCATCATCGTCATCGTCATCTCCTCCTCCTTCGTCATGGCATTTGAAT
AGTTATTCTGAATTCCATCCTCCTTCGTATTACTGTGTAAATATAAAGCCTATTTATATT
CAGATCTTTTCAGCATCTTGGATTTGTTTAATCCTTTCCGCCGCTGTCTATTATCGCCTC
AAGAAAATTCGAAACCAGAAAATCATTTCTCGAATTGAACTTTCTCGTATTGGACAGGTC
CTCAAGTTTGAAAATTTTTCCCATTATGTAGCTAGACAAATGGGATTTGCAGATAGGAGA
CAATGTCCCCATCTGTGCAAGCTAGCTACTGAGTACATAATAAAATCAGAAGGGTGTGAA
GAAGATATGTACAACTACTTTTCTAATGAACCAGATGCTGATTCGCTTTTTATAAAGCTT
GTTGAGGAGTTTGAGAGATGCATCCTTAGTTACTTCGCTTTCCATTGGAGTCATGTTCCT
TACATGATGAGCCAGGTACTGAGTGCTGATCATTTTGAGCCCAAAAAGAAGCTCCAAAAC
ATTGTCATGGCTGCTACAAGGGAACAGCGATTTGAAAGGGTAACAAAGAATCTGAAGGTT
GCAAGAGTTCTTACTACCTTAGTTGAGGAGATGAAAGCAATAGGACTCGTTTCTTCAGAT
GATTCACAGTGCACGGATGTGATGGTTCCAATGGCTCACAAAGATAGAAGCCCTGTCCTC
CTGTTTATGGGAGGTGGCATGGGGGCTGGGAAAAGCACCGCGCTCAAGGAAATTCTCAAA
GAGCCATTTTGGATTGGAGCTGCAGCCAATGTTGTTGTGATAGAAGCAGATGCTTTCAAA
GAATCAGATGTTATTTACAAAGCTCTTAGCTCTAGGGGACACCATGACATGCTTCAAACT
GCTGAACTGGTACATCAGTCATCAACAGATGCAGCATCATCCTTACTTGTAACAGCACTG
AATGAAGGAAGAGATGTGATCATGGATGGGACACTCTCATGGATACCCTTTGTGGTGCAG
ACCATAACCATGGCCAGAAATGTTCACCGGCGACGTTACCGAATGGGTACTGGTTACAAA
GTGGAAGTGGATGGCAGAGTAACTGAAAACTACTGGGAACAGATTGATGAAGAAGAACAG
GAAACTGATGGTACAAGAAAAAGAAGACCTTATAGAATAGAATTGGTTGGAGTTGTTTGT
GATGCTTATTTAGCTGTCATTAGAGGGATAAGGAGAGCTATCATGTGTAGAAGAGCTGTT
CGGGTGAACTCACAACTGAAATCACACAAGAGATTTGCTAATGCATTTAACACATACTGT
CAGCTTGTGGATAATGCAAGGTTATATTCCACTAATACTTTGGAAGGCCCCCCTAAGTTG
ATAGCATGGAAGGATAGAGACAAGACATTATTGGTGGATCCTGATGAGATAAATGTACTG
AAAATGGTAGGGAGGTTGAATGAAGGAGCTGATTCCATTTATGAACTTTACAAGAACCCT
CATCCAGCTTATCAATCTGGCTCGGTTTGGAAAGACATTGTTATGTCACCTTCTAGGTTG
AATATTCAGAAAGAACTCAAGTATTCCATTCAAAAAGTTGAAAGAATGAGATCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031491
PEP Infomation

pacid=37429372 transcript=PGSC0003DMT400046552 locus=PGSC0003DMG400018074 ID=PGSC0003DMT400046552.v4.03 annot-version=v4.03
Sequence

MSASSSSSSSSPPPSSWHLNSYSEFHPPSYYCVNIKPIYIQIFSASWICLILSAAVYYRL
KKIRNQKIISRIELSRIGQVLKFENFSHYVARQMGFADRRQCPHLCKLATEYIIKSEGCE
EDMYNYFSNEPDADSLFIKLVEEFERCILSYFAFHWSHVPYMMSQVLSADHFEPKKKLQN
IVMAATREQRFERVTKNLKVARVLTTLVEEMKAIGLVSSDDSQCTDVMVPMAHKDRSPVL
LFMGGGMGAGKSTALKEILKEPFWIGAAANVVVIEADAFKESDVIYKALSSRGHHDMLQT
AELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWIPFVVQTITMARNVHRRRYRMGTGYK
VEVDGRVTENYWEQIDEEEQETDGTRKRRPYRIELVGVVCDAYLAVIRGIRRAIMCRRAV
RVNSQLKSHKRFANAFNTYCQLVDNARLYSTNTLEGPPKLIAWKDRDKTLLVDPDEINVL
KMVGRLNEGADSIYELYKNPHPAYQSGSVWKDIVMSPSRLNIQKELKYSIQKVERMRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400046552
Transcript Infomation

pacid=37429372 locus=PGSC0003DMG400018074 ID=PGSC0003DMT400046552.v4.03 annot-version=v4.03
Sequence

ATGTCTGCTTCTTCATCATCGTCATCGTCATCTCCTCCTCCTTCGTCATGGCATTTGAAT
AGTTATTCTGAATTCCATCCTCCTTCGTATTACTGTGTAAATATAAAGCCTATTTATATT
CAGATCTTTTCAGCATCTTGGATTTGTTTAATCCTTTCCGCCGCTGTCTATTATCGCCTC
AAGAAAATTCGAAACCAGAAAATCATTTCTCGAATTGAACTTTCTCGTATTGGACAGGTC
CTCAAGTTTGAAAATTTTTCCCATTATGTAGCTAGACAAATGGGATTTGCAGATAGGAGA
CAATGTCCCCATCTGTGCAAGCTAGCTACTGAGTACATAATAAAATCAGAAGGGTGTGAA
GAAGATATGTACAACTACTTTTCTAATGAACCAGATGCTGATTCGCTTTTTATAAAGCTT
GTTGAGGAGTTTGAGAGATGCATCCTTAGTTACTTCGCTTTCCATTGGAGTCATGTTCCT
TACATGATGAGCCAGGTACTGAGTGCTGATCATTTTGAGCCCAAAAAGAAGCTCCAAAAC
ATTGTCATGGCTGCTACAAGGGAACAGCGATTTGAAAGGGTAACAAAGAATCTGAAGGTT
GCAAGAGTTCTTACTACCTTAGTTGAGGAGATGAAAGCAATAGGACTCGTTTCTTCAGAT
GATTCACAGTGCACGGATGTGATGGTTCCAATGGCTCACAAAGATAGAAGCCCTGTCCTC
CTGTTTATGGGAGGTGGCATGGGGGCTGGGAAAAGCACCGCGCTCAAGGAAATTCTCAAA
GAGCCATTTTGGATTGGAGCTGCAGCCAATGTTGTTGTGATAGAAGCAGATGCTTTCAAA
GAATCAGATGTTATTTACAAAGCTCTTAGCTCTAGGGGACACCATGACATGCTTCAAACT
GCTGAACTGGTACATCAGTCATCAACAGATGCAGCATCATCCTTACTTGTAACAGCACTG
AATGAAGGAAGAGATGTGATCATGGATGGGACACTCTCATGGATACCCTTTGTGGTGCAG
ACCATAACCATGGCCAGAAATGTTCACCGGCGACGTTACCGAATGGGTACTGGTTACAAA
GTGGAAGTGGATGGCAGAGTAACTGAAAACTACTGGGAACAGATTGATGAAGAAGAACAG
GAAACTGATGGTACAAGAAAAAGAAGACCTTATAGAATAGAATTGGTTGGAGTTGTTTGT
GATGCTTATTTAGCTGTCATTAGAGGGATAAGGAGAGCTATCATGTGTAGAAGAGCTGTT
CGGGTGAACTCACAACTGAAATCACACAAGAGATTTGCTAATGCATTTAACACATACTGT
CAGCTTGTGGATAATGCAAGGTTATATTCCACTAATACTTTGGAAGGCCCCCCTAAGTTG
ATAGCATGGAAGGATAGAGACAAGACATTATTGGTGGATCCTGATGAGATAAATGTACTG
AAAATGGTAGGGAGGTTGAATGAAGGAGCTGATTCCATTTATGAACTTTACAAGAACCCT
CATCCAGCTTATCAATCTGGCTCGGTTTGGAAAGACATTGTTATGTCACCTTCTAGGTTG
AATATTCAGAAAGAACTCAAGTATTCCATTCAAAAAGTTGAAAGAATGAGATCCTGA