Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046528
CDS Infomation

pacid=37438517 polypeptide=PGSC0003DMP400031478 locus=PGSC0003DMG400018060 ID=PGSC0003DMT400046528.v4.03 annot-version=v4.03
Sequence

ATGGACGGAAGAGGAGCGTCAAGATATTGGTGTCATCATTGTTCAAGGAGGGTGAACCCC
ATGATGGAGGTTGAGTTAAAATGTCCCATTTGTCAACTAGGATTTATTGAAGAAATGGGA
TCAGACACTACTGAGACCCCTTTAGATTCTGATTCTGATTCTGATCGTGCCCTCTCACTT
TGGGCACCAATCTTGTTAGGCATGATGACCAACCCTCGTCGTCGTTCTAGACTTAGGCAT
CTCGAATTTGAAGATGATGACGATGATGATCATACACGTGAAGCCGATACACAACTTGAT
CCAGACCTGGCATCTATAATAAATAGGCGCAGGAGGAACTCTGCTACAATTCTCCAGCTC
TTGCAAGGTATTCGAGCTGGAATGTTGGCTGAGTCGGAGAACCCTAACCCTGATAATGAA
AACAGGGAGACAGGTAGAGAGAGTAGGGATCGTGAGCGTGTTATACTTATAAATCCATTC
AATCAAACCATCATTGTACAGGGTTCGGATAATAATTCCAGGAACCAACCTATTGGCTCA
TTGGGTGATTATTTCATTGGTCCTGGTTTAGACGTGTTGCTGCAACATTTGGCAGAGAAT
GATCCAAATAGGTATGGTACTCCACCAGCTCAAAAAGAGGTTGTAGAGGCATTGCCTGTG
GTGACAATTGATGAGACATTGCAGTGTTCTGTCTGTTTGGAAGACTTTGAGATTGGGACT
GAAGCCAAAGAGATGCCTTGTAAGCACAGGTTTCATGGTGACTGCATCTTACCATGGCTG
GAGCTTCATAGCACATGTCCAGTCTGTAGGCACCAGTTGCCCTCTGATGAATCCAAAGTT
GAATCTGCTGGAACCAATGATGGAAGTGGTAGTAACACAAATGCTCAGAGTAGTAATGGT
AATGGTAGAAGGTATGAAGATGAGGATACTAGGAATGAAAACGGTCGCCGGTTTCCAGTG
TCACTTCCGTGGCCTTTGAGTGGCTTGTTTTCATCCCCAAACTCAGGTAGTAATGGAAAT
TCATCATCAATGACGTCTTCTGCATCAAATGCGAACTCCAATGCTCATATGCATGAGGAT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400031478
PEP Infomation

pacid=37438517 transcript=PGSC0003DMT400046528 locus=PGSC0003DMG400018060 ID=PGSC0003DMT400046528.v4.03 annot-version=v4.03
Sequence

MDGRGASRYWCHHCSRRVNPMMEVELKCPICQLGFIEEMGSDTTETPLDSDSDSDRALSL
WAPILLGMMTNPRRRSRLRHLEFEDDDDDDHTREADTQLDPDLASIINRRRRNSATILQL
LQGIRAGMLAESENPNPDNENRETGRESRDRERVILINPFNQTIIVQGSDNNSRNQPIGS
LGDYFIGPGLDVLLQHLAENDPNRYGTPPAQKEVVEALPVVTIDETLQCSVCLEDFEIGT
EAKEMPCKHRFHGDCILPWLELHSTCPVCRHQLPSDESKVESAGTNDGSGSNTNAQSSNG
NGRRYEDEDTRNENGRRFPVSLPWPLSGLFSSPNSGSNGNSSSMTSSASNANSNAHMHED
*

Transcript Sequence

Transcript ID

PGSC0003DMT400046528
Transcript Infomation

pacid=37438517 locus=PGSC0003DMG400018060 ID=PGSC0003DMT400046528.v4.03 annot-version=v4.03
Sequence

ATGGACGGAAGAGGAGCGTCAAGATATTGGTGTCATCATTGTTCAAGGAGGGTGAACCCC
ATGATGGAGGTTGAGTTAAAATGTCCCATTTGTCAACTAGGATTTATTGAAGAAATGGGA
TCAGACACTACTGAGACCCCTTTAGATTCTGATTCTGATTCTGATCGTGCCCTCTCACTT
TGGGCACCAATCTTGTTAGGCATGATGACCAACCCTCGTCGTCGTTCTAGACTTAGGCAT
CTCGAATTTGAAGATGATGACGATGATGATCATACACGTGAAGCCGATACACAACTTGAT
CCAGACCTGGCATCTATAATAAATAGGCGCAGGAGGAACTCTGCTACAATTCTCCAGCTC
TTGCAAGGTATTCGAGCTGGAATGTTGGCTGAGTCGGAGAACCCTAACCCTGATAATGAA
AACAGGGAGACAGGTAGAGAGAGTAGGGATCGTGAGCGTGTTATACTTATAAATCCATTC
AATCAAACCATCATTGTACAGGGTTCGGATAATAATTCCAGGAACCAACCTATTGGCTCA
TTGGGTGATTATTTCATTGGTCCTGGTTTAGACGTGTTGCTGCAACATTTGGCAGAGAAT
GATCCAAATAGGTATGGTACTCCACCAGCTCAAAAAGAGGTTGTAGAGGCATTGCCTGTG
GTGACAATTGATGAGACATTGCAGTGTTCTGTCTGTTTGGAAGACTTTGAGATTGGGACT
GAAGCCAAAGAGATGCCTTGTAAGCACAGGTTTCATGGTGACTGCATCTTACCATGGCTG
GAGCTTCATAGCACATGTCCAGTCTGTAGGCACCAGTTGCCCTCTGATGAATCCAAAGTT
GAATCTGCTGGAACCAATGATGGAAGTGGTAGTAACACAAATGCTCAGAGTAGTAATGGT
AATGGTAGAAGGTATGAAGATGAGGATACTAGGAATGAAAACGGTCGCCGGTTTCCAGTG
TCACTTCCGTGGCCTTTGAGTGGCTTGTTTTCATCCCCAAACTCAGGTAGTAATGGAAAT
TCATCATCAATGACGTCTTCTGCATCAAATGCGAACTCCAATGCTCATATGCATGAGGAT
TAA