Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046505
CDS Infomation

pacid=37430565 polypeptide=PGSC0003DMP400031465 locus=PGSC0003DMG400018050 ID=PGSC0003DMT400046505.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGCTTTCCTTCAAATTCTGATTGAAAATATCACTTCTTTCCTTGAAGGGGAA
CTTTCATTGCTTTTCGGTTTTGAAAATGAGTTTGAAAATCTTTCTAGCAGGTTTTCTACA
ATCCAAGCCGTGCTTGAAGATGCTCAGATGAAGCAACTCAAGGACAAGGCAATTAAAAAC
TGGCGTGCATATATTATTCTCTATTTTCTGCCGACTCCTAATGATCGTGAATGTAACAAT
ATTCTCGTGTGGACATTGCTTGGACCAGGTTCTATTTTAACTGAACCACAAGTTTATGGA
AGGGACAAAGAGGAAGATGAGATAGTGAAAATCCTGATAAACTATGTTAGTGATGCCCAA
CAACTTTCAGTCCTCCCAATAGTTGGTATGGGGGGACTAGGAAAGACTACTCTTTCCCAA
ATGGTCTTCAATGATCAGAGAGTGATTCAGCATTTCGATCCCAAAATATGGGTTTGTGTC
TCGGACAATTTTGAAGAGAAGAAGTTGATAAAGGCAATTGTAGAATCTGCTGAAGGAAGG
CCACTACTTGGTGACATGGACTTGGCTCCACTTCAAAAGAAGCTTCAGGAGTTGCTGAAT
GGAAAAAGATACTTACTCGTCTTAGATGATGTTTGGAATGAAGATCAAGAGAAGTGGGAT
TGTTGGTTGTTGTTCATGCAACGTGCATTGGGACACCAAGAAGAAATAAATCCTAACCTT
GTGGTTATCGGAAAGGAGATAGTGAAAAAATGTGGTGGTGTGCCTCTAGCAGCCAAGACT
CTGGGAGGTATTTTGCGATTCAAGAGAGAAGAAAGAGAATGGGAACATGTGAGAGATAGT
GAGATTTGGAAGTTGCCTCAAGATGAAAGTTCTATTCTGCCTGCCCTGCAACTTAGTTAC
CATCACCTTCCACTTGATTTGAGACAATGCTTTACATATTGTGCAGTATTCCCAAAGGAT
ACCGAAATGGAAAAGGAAAATCTAATCTCTCTCTGGATGGCACATGGTTTCCTTTTATCG
AAAGGAAACTTGGAGCTAGAGTATGTAGGTAATGAAGTATGGAATGAATTATACTTGAGA
TCTTTCTTCCAAGAGATTGAAGTTAAATCTAGCAATACTTATTTCAAGATGCATGATCTC
ATTCATGATTTGGCGACATCTCTGTTTTCGGCAAGCACATCAAGCAGCAATATCCGCCAA
GTAAGTGTAAAATATTACCCATATATGATGTCCATTGGTTTAGCTGAAATCGTGTCTCCT
TACTCTCCTCCTCTCTTGCAAAATTTTGTCTCGTTGAGGGTACTTAATCTAAGTTACACA
GAACTTGAGCTGGAGCAGCTACCGTCTTCCATTGGAGATCTAGTACATTTAAGATACCTA
AACTTGTCTAGCAATCTTAGAATTCGTAGTCTTCCAAAGCAGTTATGCAAGCTTCAAAAT
CTGCAGACTCTTGATTTACATGACTGCTGGTCACTTTCTTGTTTGCCAAAACAAACAAGT
ACACTTGGTAGTCTCCGAAATCTTTTATTTGATGGTTGTCCATTGACTTGTATGCCACCA
AGGATAGGATCTTTGACATGCCTTAAGACTCTAAGTTACTTTGTTGTGGGAAGGAAGAAA
AGTTATCAACTTGGTGAACTACGAAACCTGGATCTCCATGGCTCAATTTCAATCACAAAC
CTTGAGAGAGTGAAGAAGCATACAGAGGCAAAAGAGGCCAACTTATCTGCAAAAGCAAAT
CTGCACTCTTTAACAATCATTGGCTTCAGAGGATTCCGTCTCCCAGACTGGATGAATCAC
TCAGTTTTGAAAAGAGTCGTTTCTATTAGAATTGAAGGTTGCGAAAACTGCTCATGCTTA
CCACCCTTTGGTGATTTGCCTTGTCTAGAAAGTCTAGTGTTAGCAAATGGGTCTGGGGAG
GTGGAGTATCTTGAAGAGGATGACGTTTCCACAAGAAGATGGTTTCCATCCCTGAGAAAA
CTTAGTATATGGGACTTCTGTAATCTGAAAGGATTGCTCAAAAAGGGAGGAGAAGAGCAA
TTCCCTGTGCTTGAAGAGATTGAACTCCATATCCAATCTTTGCGCTCTTACTCTCCTCCA
CATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400031465
PEP Infomation

pacid=37430565 transcript=PGSC0003DMT400046505 locus=PGSC0003DMG400018050 ID=PGSC0003DMT400046505.v4.03 annot-version=v4.03
Sequence

MAEAFLQILIENITSFLEGELSLLFGFENEFENLSSRFSTIQAVLEDAQMKQLKDKAIKN
WRAYIILYFLPTPNDRECNNILVWTLLGPGSILTEPQVYGRDKEEDEIVKILINYVSDAQ
QLSVLPIVGMGGLGKTTLSQMVFNDQRVIQHFDPKIWVCVSDNFEEKKLIKAIVESAEGR
PLLGDMDLAPLQKKLQELLNGKRYLLVLDDVWNEDQEKWDCWLLFMQRALGHQEEINPNL
VVIGKEIVKKCGGVPLAAKTLGGILRFKREEREWEHVRDSEIWKLPQDESSILPALQLSY
HHLPLDLRQCFTYCAVFPKDTEMEKENLISLWMAHGFLLSKGNLELEYVGNEVWNELYLR
SFFQEIEVKSSNTYFKMHDLIHDLATSLFSASTSSSNIRQVSVKYYPYMMSIGLAEIVSP
YSPPLLQNFVSLRVLNLSYTELELEQLPSSIGDLVHLRYLNLSSNLRIRSLPKQLCKLQN
LQTLDLHDCWSLSCLPKQTSTLGSLRNLLFDGCPLTCMPPRIGSLTCLKTLSYFVVGRKK
SYQLGELRNLDLHGSISITNLERVKKHTEAKEANLSAKANLHSLTIIGFRGFRLPDWMNH
SVLKRVVSIRIEGCENCSCLPPFGDLPCLESLVLANGSGEVEYLEEDDVSTRRWFPSLRK
LSIWDFCNLKGLLKKGGEEQFPVLEEIELHIQSLRSYSPPH*

Transcript Sequence

Transcript ID

PGSC0003DMT400046505
Transcript Infomation

pacid=37430565 locus=PGSC0003DMG400018050 ID=PGSC0003DMT400046505.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGCTTTCCTTCAAATTCTGATTGAAAATATCACTTCTTTCCTTGAAGGGGAA
CTTTCATTGCTTTTCGGTTTTGAAAATGAGTTTGAAAATCTTTCTAGCAGGTTTTCTACA
ATCCAAGCCGTGCTTGAAGATGCTCAGATGAAGCAACTCAAGGACAAGGCAATTAAAAAC
TGGCGTGCATATATTATTCTCTATTTTCTGCCGACTCCTAATGATCGTGAATGTAACAAT
ATTCTCGTGTGGACATTGCTTGGACCAGGTTCTATTTTAACTGAACCACAAGTTTATGGA
AGGGACAAAGAGGAAGATGAGATAGTGAAAATCCTGATAAACTATGTTAGTGATGCCCAA
CAACTTTCAGTCCTCCCAATAGTTGGTATGGGGGGACTAGGAAAGACTACTCTTTCCCAA
ATGGTCTTCAATGATCAGAGAGTGATTCAGCATTTCGATCCCAAAATATGGGTTTGTGTC
TCGGACAATTTTGAAGAGAAGAAGTTGATAAAGGCAATTGTAGAATCTGCTGAAGGAAGG
CCACTACTTGGTGACATGGACTTGGCTCCACTTCAAAAGAAGCTTCAGGAGTTGCTGAAT
GGAAAAAGATACTTACTCGTCTTAGATGATGTTTGGAATGAAGATCAAGAGAAGTGGGAT
TGTTGGTTGTTGTTCATGCAACGTGCATTGGGACACCAAGAAGAAATAAATCCTAACCTT
GTGGTTATCGGAAAGGAGATAGTGAAAAAATGTGGTGGTGTGCCTCTAGCAGCCAAGACT
CTGGGAGGTATTTTGCGATTCAAGAGAGAAGAAAGAGAATGGGAACATGTGAGAGATAGT
GAGATTTGGAAGTTGCCTCAAGATGAAAGTTCTATTCTGCCTGCCCTGCAACTTAGTTAC
CATCACCTTCCACTTGATTTGAGACAATGCTTTACATATTGTGCAGTATTCCCAAAGGAT
ACCGAAATGGAAAAGGAAAATCTAATCTCTCTCTGGATGGCACATGGTTTCCTTTTATCG
AAAGGAAACTTGGAGCTAGAGTATGTAGGTAATGAAGTATGGAATGAATTATACTTGAGA
TCTTTCTTCCAAGAGATTGAAGTTAAATCTAGCAATACTTATTTCAAGATGCATGATCTC
ATTCATGATTTGGCGACATCTCTGTTTTCGGCAAGCACATCAAGCAGCAATATCCGCCAA
GTAAGTGTAAAATATTACCCATATATGATGTCCATTGGTTTAGCTGAAATCGTGTCTCCT
TACTCTCCTCCTCTCTTGCAAAATTTTGTCTCGTTGAGGGTACTTAATCTAAGTTACACA
GAACTTGAGCTGGAGCAGCTACCGTCTTCCATTGGAGATCTAGTACATTTAAGATACCTA
AACTTGTCTAGCAATCTTAGAATTCGTAGTCTTCCAAAGCAGTTATGCAAGCTTCAAAAT
CTGCAGACTCTTGATTTACATGACTGCTGGTCACTTTCTTGTTTGCCAAAACAAACAAGT
ACACTTGGTAGTCTCCGAAATCTTTTATTTGATGGTTGTCCATTGACTTGTATGCCACCA
AGGATAGGATCTTTGACATGCCTTAAGACTCTAAGTTACTTTGTTGTGGGAAGGAAGAAA
AGTTATCAACTTGGTGAACTACGAAACCTGGATCTCCATGGCTCAATTTCAATCACAAAC
CTTGAGAGAGTGAAGAAGCATACAGAGGCAAAAGAGGCCAACTTATCTGCAAAAGCAAAT
CTGCACTCTTTAACAATCATTGGCTTCAGAGGATTCCGTCTCCCAGACTGGATGAATCAC
TCAGTTTTGAAAAGAGTCGTTTCTATTAGAATTGAAGGTTGCGAAAACTGCTCATGCTTA
CCACCCTTTGGTGATTTGCCTTGTCTAGAAAGTCTAGTGTTAGCAAATGGGTCTGGGGAG
GTGGAGTATCTTGAAGAGGATGACGTTTCCACAAGAAGATGGTTTCCATCCCTGAGAAAA
CTTAGTATATGGGACTTCTGTAATCTGAAAGGATTGCTCAAAAAGGGAGGAGAAGAGCAA
TTCCCTGTGCTTGAAGAGATTGAACTCCATATCCAATCTTTGCGCTCTTACTCTCCTCCA
CATTAG