Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046483
CDS Infomation

pacid=37439262 polypeptide=PGSC0003DMP400031453 locus=PGSC0003DMG400018042 ID=PGSC0003DMT400046483.v4.03 annot-version=v4.03
Sequence

ATGGGGTGTGTTGCATCCAAGTTAGAAGATGAAGAAGAGGTAGTATCCATATGTAAAGAG
AGAAAACAGTACCTGAAATTGGCTGTAGATAGGAGGTACACACTGGCTGATGCACATTAC
AAGTACTGTCAAGCATTGTATGGAGTCTCAGCAGCTTTAAAACTCTTTGTTGCTCGTCAT
TCTACACCTACTTCTCCATATCTCATCACATTCCCACCACCTTGTTGCCCTTCTTCTCCA
AAAAAGGAGAATGTGGTTTCAAACCCCTTGTTTCTTCAGCAAACACCTTCTGAGCCAACC
CAAGAAACTGTTTGCTGTGGGCCATGCAATAAATCTACAGAAACTCCATCAGATTCTTCT
GAGGAAGAGAGAGAAGAGAAAGTTGTGAAACAGGAGCACCAGCAGCAGCAGCAGCCACAA
GGTTATGGCTATTATTACATGGAAATGCCTCAGATGATGCATTCACCACCAACAGATTTT
GGTTGGGATTTTTTCAACCCTTTTAATAGTGTAAGGCCAGAGATGATTAGTGGGTATCAT
AGGATTTCTGAGGAGGATTTAAGGGCAGTGAGGGAGCAAGAAGGAATTCCAGATTTAGAA
GAAGAGGAAGAGGAAGATGATGAAGAAGGGGATGGAATGAAGGAAGAGAATAAGGTAGTA
GCCACTAAAGAAAAAGAAAATGTGGAGCAAAGAGAATATGGGACTGAAGTTGTACAACAA
GCAGTGCACACTGCTAATGTAAACCAAGAGGACCAGAAAAAAAGTTTGACAGTTGTGGAT
AATCCATTACAGGGGAGGGAGTTACTTGAAGCACTAACTGACATTGAAGACCATTTTGTC
AAGGCATATGATGCTGGAAAGGAAGTATCAAGGATGTTAGAGGCAAATTGGGTACATTCA
CAGCCTAATTTGGGAGAACCCAAAGAGAACTCAACAAAAATCATCCCAGCAATTACTTGG
AAGTCTCCTGCATCTCGTTCGCCATCATGCAAGAGTCTTGTGGCGTCTAGTTCTAAAAGT
TCTTCCACATGGACAGAATTCAAGAATGATCTATTTGATGACTATGGTGGAATGGGTTCT
GGGAGCCATTTGCTGACGCTAGGAAGGCTATATGCTTGGGAGAAGAAGTTGTATGACGAG
GTTAAGGCTGGAGATAGCACTTGGAAATTATATGAGAAGAAGTGCAATCAACTCAAAAAT
CATGATGCCAGAGGAGATGAAAGACGGACCACAGACAAAACCAGAGCAGCAGTAAAAGAA
TTATATAGTAGGATCCTAGTCACAATTCGAAGTGCTGAGACCATATCAAAAAGAATTGAC
GAGCTACGAGATGATGAACTGCAGCCTCAAATCATTGAACTGCTTCAAGGTATGATGAGA
ACTTGGAAGATCATGCTGGAATCCCATGAGATCCAGAACAAGATTATATTCGACGTGAAA
AGTTTCACCTGTCCTACATATGGAAAGTTCTGCAATGACTCTCATCGGCTTGCCACAGTC
CAGCTTGACGTTGAGCTTCAAAATTGGCGCGCTCGCTTCCAGGATTACATTGCTGCCCAG
AAGGCTTACGTGGAAGCACTCCATGGATGGCTGTCCAAGTTTGCAGTCCCTGAAGTTGAA
TTCTACTCCAAAAGTAGGAGTTCAACTCCAGCTTGTCGAGCTAATGGTCCTCCACTTCTC
ATGATTTGTCACGATTGGTTGTCTGCCATGAACAAGTTGCCAGATAGAGCAGTTTCTGTT
GCCCTTAAAGGCTGCGGAAAGGATGTAAGAGCTTTGTGGGTTCAGCAGGGAGAGGAACAG
CAACAAAAGCGAAAAGTTGACAGCATGTCCAAAGAATTAGATAGGAAAACACTGGCGTTC
CAAAAGGTAGAGAACAAGCTTTATGAGTTCAAGCTCACAGACCGAAGCTCGGAGATTGAA
ATCGATCATAGAGCTGAGTATCTGAAGGAGAGGAAAGACTTGCTGGACAACTTCAGGAAA
AGGGTTGATCTAGAGAAGGAAGAACACCAGAAATGCATGCAAGAAACTCAGAGGATCACT
CTGAACGGCTTTCAGACTGGTTTTTGCAGAGTTTTTGAGTCTATAACAGAATTTTCCAGT
GCAGCACTAAAAATGTACAATGAGCTACTAAGCAGTGGTGAGATGGCTGAGAAAATCGGT
AACCCGCCATCCATAGAGTGCTCCCAAGCTGGTGAAGATGTCAAAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400031453
PEP Infomation

pacid=37439262 transcript=PGSC0003DMT400046483 locus=PGSC0003DMG400018042 ID=PGSC0003DMT400046483.v4.03 annot-version=v4.03
Sequence

MGCVASKLEDEEEVVSICKERKQYLKLAVDRRYTLADAHYKYCQALYGVSAALKLFVARH
STPTSPYLITFPPPCCPSSPKKENVVSNPLFLQQTPSEPTQETVCCGPCNKSTETPSDSS
EEEREEKVVKQEHQQQQQPQGYGYYYMEMPQMMHSPPTDFGWDFFNPFNSVRPEMISGYH
RISEEDLRAVREQEGIPDLEEEEEEDDEEGDGMKEENKVVATKEKENVEQREYGTEVVQQ
AVHTANVNQEDQKKSLTVVDNPLQGRELLEALTDIEDHFVKAYDAGKEVSRMLEANWVHS
QPNLGEPKENSTKIIPAITWKSPASRSPSCKSLVASSSKSSSTWTEFKNDLFDDYGGMGS
GSHLLTLGRLYAWEKKLYDEVKAGDSTWKLYEKKCNQLKNHDARGDERRTTDKTRAAVKE
LYSRILVTIRSAETISKRIDELRDDELQPQIIELLQGMMRTWKIMLESHEIQNKIIFDVK
SFTCPTYGKFCNDSHRLATVQLDVELQNWRARFQDYIAAQKAYVEALHGWLSKFAVPEVE
FYSKSRSSTPACRANGPPLLMICHDWLSAMNKLPDRAVSVALKGCGKDVRALWVQQGEEQ
QQKRKVDSMSKELDRKTLAFQKVENKLYEFKLTDRSSEIEIDHRAEYLKERKDLLDNFRK
RVDLEKEEHQKCMQETQRITLNGFQTGFCRVFESITEFSSAALKMYNELLSSGEMAEKIG
NPPSIECSQAGEDVKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400046483
Transcript Infomation

pacid=37439262 locus=PGSC0003DMG400018042 ID=PGSC0003DMT400046483.v4.03 annot-version=v4.03
Sequence

ATGGGGTGTGTTGCATCCAAGTTAGAAGATGAAGAAGAGGTAGTATCCATATGTAAAGAG
AGAAAACAGTACCTGAAATTGGCTGTAGATAGGAGGTACACACTGGCTGATGCACATTAC
AAGTACTGTCAAGCATTGTATGGAGTCTCAGCAGCTTTAAAACTCTTTGTTGCTCGTCAT
TCTACACCTACTTCTCCATATCTCATCACATTCCCACCACCTTGTTGCCCTTCTTCTCCA
AAAAAGGAGAATGTGGTTTCAAACCCCTTGTTTCTTCAGCAAACACCTTCTGAGCCAACC
CAAGAAACTGTTTGCTGTGGGCCATGCAATAAATCTACAGAAACTCCATCAGATTCTTCT
GAGGAAGAGAGAGAAGAGAAAGTTGTGAAACAGGAGCACCAGCAGCAGCAGCAGCCACAA
GGTTATGGCTATTATTACATGGAAATGCCTCAGATGATGCATTCACCACCAACAGATTTT
GGTTGGGATTTTTTCAACCCTTTTAATAGTGTAAGGCCAGAGATGATTAGTGGGTATCAT
AGGATTTCTGAGGAGGATTTAAGGGCAGTGAGGGAGCAAGAAGGAATTCCAGATTTAGAA
GAAGAGGAAGAGGAAGATGATGAAGAAGGGGATGGAATGAAGGAAGAGAATAAGGTAGTA
GCCACTAAAGAAAAAGAAAATGTGGAGCAAAGAGAATATGGGACTGAAGTTGTACAACAA
GCAGTGCACACTGCTAATGTAAACCAAGAGGACCAGAAAAAAAGTTTGACAGTTGTGGAT
AATCCATTACAGGGGAGGGAGTTACTTGAAGCACTAACTGACATTGAAGACCATTTTGTC
AAGGCATATGATGCTGGAAAGGAAGTATCAAGGATGTTAGAGGCAAATTGGGTACATTCA
CAGCCTAATTTGGGAGAACCCAAAGAGAACTCAACAAAAATCATCCCAGCAATTACTTGG
AAGTCTCCTGCATCTCGTTCGCCATCATGCAAGAGTCTTGTGGCGTCTAGTTCTAAAAGT
TCTTCCACATGGACAGAATTCAAGAATGATCTATTTGATGACTATGGTGGAATGGGTTCT
GGGAGCCATTTGCTGACGCTAGGAAGGCTATATGCTTGGGAGAAGAAGTTGTATGACGAG
GTTAAGGCTGGAGATAGCACTTGGAAATTATATGAGAAGAAGTGCAATCAACTCAAAAAT
CATGATGCCAGAGGAGATGAAAGACGGACCACAGACAAAACCAGAGCAGCAGTAAAAGAA
TTATATAGTAGGATCCTAGTCACAATTCGAAGTGCTGAGACCATATCAAAAAGAATTGAC
GAGCTACGAGATGATGAACTGCAGCCTCAAATCATTGAACTGCTTCAAGGTATGATGAGA
ACTTGGAAGATCATGCTGGAATCCCATGAGATCCAGAACAAGATTATATTCGACGTGAAA
AGTTTCACCTGTCCTACATATGGAAAGTTCTGCAATGACTCTCATCGGCTTGCCACAGTC
CAGCTTGACGTTGAGCTTCAAAATTGGCGCGCTCGCTTCCAGGATTACATTGCTGCCCAG
AAGGCTTACGTGGAAGCACTCCATGGATGGCTGTCCAAGTTTGCAGTCCCTGAAGTTGAA
TTCTACTCCAAAAGTAGGAGTTCAACTCCAGCTTGTCGAGCTAATGGTCCTCCACTTCTC
ATGATTTGTCACGATTGGTTGTCTGCCATGAACAAGTTGCCAGATAGAGCAGTTTCTGTT
GCCCTTAAAGGCTGCGGAAAGGATGTAAGAGCTTTGTGGGTTCAGCAGGGAGAGGAACAG
CAACAAAAGCGAAAAGTTGACAGCATGTCCAAAGAATTAGATAGGAAAACACTGGCGTTC
CAAAAGGTAGAGAACAAGCTTTATGAGTTCAAGCTCACAGACCGAAGCTCGGAGATTGAA
ATCGATCATAGAGCTGAGTATCTGAAGGAGAGGAAAGACTTGCTGGACAACTTCAGGAAA
AGGGTTGATCTAGAGAAGGAAGAACACCAGAAATGCATGCAAGAAACTCAGAGGATCACT
CTGAACGGCTTTCAGACTGGTTTTTGCAGAGTTTTTGAGTCTATAACAGAATTTTCCAGT
GCAGCACTAAAAATGTACAATGAGCTACTAAGCAGTGGTGAGATGGCTGAGAAAATCGGT
AACCCGCCATCCATAGAGTGCTCCCAAGCTGGTGAAGATGTCAAAAGATGA