Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046482
CDS Infomation

pacid=37438864 polypeptide=PGSC0003DMP400031452 locus=PGSC0003DMG400018041 ID=PGSC0003DMT400046482.v4.03 annot-version=v4.03
Sequence

ATGGCCACATCTCTCTCGGTTCGGCCCAACCGTACCATCATCAGTAGTGACCCGGCCGGT
TCAACCCGGCCTACTCCTATCCGCCGCCGTCCCGTCTCCGCTCATTTGCCAAAAATTCCA
AACTCCGATTGTTCCCGACGGAGGCTGGCGTTTGCTTTCCACCGCCGGAAATTGGACACC
GCCGTTCAAGCAGGTTCTAGAGCTGATGATTCGGCTCCTTTTGAGATGTCGGTAGAGAAT
GCCCTGAAATTGCTAGGTGTCACTGAGGGTGCGAGCTTCGATGATATTCTTCGTGCCAAA
AAATCAATTATCTCGTCTTGTAAAGATGATCCAGATACAATTGCGCAGGTAGAGGCTGCA
TATGATATGCTTCTCATGCAAAGCTTATCACAGAGGAGATCTGGAAAAGTTGTGGATAGT
AGCGTACGCTTTGCTGATGTTAAAGCTGCTAATGTTTCTGGGATGGGATCAATGCCCAAG
TGGCTGCAGACGACTGTCAAGAGCTCACCGGTCGCAGTTGAAGCACCAGCTGCTAAAGAG
TTAGGTGTTCAAGCAGGAGTCTATGGAGCCTTAATGGTTTTAACATATGTTAATGGAGCC
TCAACACCTTTAGGAGTATCGTATGGAGCTGATGTTCCTGGACTAATCTTAGCCACGAGC
TTTGGGGCCACCTTGTACTTCATGACCAAGAAAAATGTCAAGTTGGGAAAAGCAAGTGTT
ATAACAATTGGTGGGCTCGTTGCTGGTGCGGTGGTAGGTTCAGCAGTAGAAAATTGGTTG
CAAGTAGACATTGTCCCGTTACTCGGTATACACACTCCTGCTACGGTTGTGAGTGAATTT
ATACTTTTCTCACAATTTTTGGTCTCGTTGTATCTGATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400031452
PEP Infomation

pacid=37438864 transcript=PGSC0003DMT400046482 locus=PGSC0003DMG400018041 ID=PGSC0003DMT400046482.v4.03 annot-version=v4.03
Sequence

MATSLSVRPNRTIISSDPAGSTRPTPIRRRPVSAHLPKIPNSDCSRRRLAFAFHRRKLDT
AVQAGSRADDSAPFEMSVENALKLLGVTEGASFDDILRAKKSIISSCKDDPDTIAQVEAA
YDMLLMQSLSQRRSGKVVDSSVRFADVKAANVSGMGSMPKWLQTTVKSSPVAVEAPAAKE
LGVQAGVYGALMVLTYVNGASTPLGVSYGADVPGLILATSFGATLYFMTKKNVKLGKASV
ITIGGLVAGAVVGSAVENWLQVDIVPLLGIHTPATVVSEFILFSQFLVSLYLI*

Transcript Sequence

Transcript ID

PGSC0003DMT400046482
Transcript Infomation

pacid=37438864 locus=PGSC0003DMG400018041 ID=PGSC0003DMT400046482.v4.03 annot-version=v4.03
Sequence

ATGGCCACATCTCTCTCGGTTCGGCCCAACCGTACCATCATCAGTAGTGACCCGGCCGGT
TCAACCCGGCCTACTCCTATCCGCCGCCGTCCCGTCTCCGCTCATTTGCCAAAAATTCCA
AACTCCGATTGTTCCCGACGGAGGCTGGCGTTTGCTTTCCACCGCCGGAAATTGGACACC
GCCGTTCAAGCAGGTTCTAGAGCTGATGATTCGGCTCCTTTTGAGATGTCGGTAGAGAAT
GCCCTGAAATTGCTAGGTGTCACTGAGGGTGCGAGCTTCGATGATATTCTTCGTGCCAAA
AAATCAATTATCTCGTCTTGTAAAGATGATCCAGATACAATTGCGCAGGTAGAGGCTGCA
TATGATATGCTTCTCATGCAAAGCTTATCACAGAGGAGATCTGGAAAAGTTGTGGATAGT
AGCGTACGCTTTGCTGATGTTAAAGCTGCTAATGTTTCTGGGATGGGATCAATGCCCAAG
TGGCTGCAGACGACTGTCAAGAGCTCACCGGTCGCAGTTGAAGCACCAGCTGCTAAAGAG
TTAGGTGTTCAAGCAGGAGTCTATGGAGCCTTAATGGTTTTAACATATGTTAATGGAGCC
TCAACACCTTTAGGAGTATCGTATGGAGCTGATGTTCCTGGACTAATCTTAGCCACGAGC
TTTGGGGCCACCTTGTACTTCATGACCAAGAAAAATGTCAAGTTGGGAAAAGCAAGTGTT
ATAACAATTGGTGGGCTCGTTGCTGGTGCGGTGGTAGGTTCAGCAGTAGAAAATTGGTTG
CAAGTAGACATTGTCCCGTTACTCGGTATACACACTCCTGCTACGGTTGTGAGTGAATTT
ATACTTTTCTCACAATTTTTGGTCTCGTTGTATCTGATATAG