Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046469
CDS Infomation

pacid=37438957 polypeptide=PGSC0003DMP400031444 locus=PGSC0003DMG400018039 ID=PGSC0003DMT400046469.v4.03 annot-version=v4.03
Sequence

ATGGTCTCTGAAGCACTGCAACAGTTTTTCATGGCTACCAAACTTGCATGTTCATCATCT
CTGCCATGGATTTGGGTGATTGAAGCACTGGCAACTTCCAGTGAGATAGACACATCTTTA
CTCATCAATTTGCTTAAGAGGACTCCTGAAATCTCTGATGATCTGGGGAGAAATGCAAGG
GAAATGGTTTCCTTGAGAGTTTTAGAGAGCTTATTTGTTCAGAAAAACTCAGATGCAAAT
AGTGTTGCTTCAGTTCCAGGTGAGAAAGTTGAACTTGATCCGTCAAGGGACTGTGAAGAT
GTCCTTCGCTGCATATTGTTGGAGGTGTCTGCATCAAATCTAAAAACAGCTACGCCAGAT
ATGTTAAAGTGGGATGTTCTCTCATTCATTATGAAAAAGAGATCTATCTTGCCGAAGTGT
CACTTGCAACAATTTAAAGATGCCATTGTGAAATCGACGAATCCTTTTTCCACTTCCTTG
AAAGAAAGAAGTGGATTGGAGTTGGGGAACCACTACAGAGACAGTGTTACTGCTGATGCT
ATTGATTGTGATGGCTTTAACGAGGGACATGAAATAGGAGGTGTGAATACCCGACGTTCT
GCACCAACTGAGTACTTGGATACTTCAACACAGGGCAACAAGAATGGCCTGCAAGAAAAT
CAGCCTGGAAGCACTCTGCTGCCGGTTAAGAGAAGTTTTAATGCCCCTAGTGCTTATGAA
GCCACACCAGAGAAAAGTTCTGATCCATGTGCAAAGGCTGCCAAAAAGTTTAAGCAGGAT
GTTGCTGGTCCCATTCAGAACACTGTTCCTGATTTGATATCGTCTCAAAGAGATGGAGTC
CCAGCAGAATCATGTGGAGGAAGTCAATCTATTGTTCAAAAAAGGAACTCGGAAGATGAT
GGTACCCTCAAAGCAAATGGATGCCTGAAGGATGGTAAAGCAAAGCATGCTGCATCAGCA
AGTGTTTTATGTGGCATTGACTCTAGTATCAAGGATCGGTTGCCTCAAAGAATGAGTTCA
GACAAGAAGTTCCAAAGTATTGAAAGTAGCAGCAATTGTTGTGCTGAACTGGGAACATCA
AGTGACTCATCCCTGCGTGTGATTCAGCAGGATTCTCGCACTTGTGGCTCCAAAGGTGAC
ATGGATTATAATCTTCCACAAGATCTGCAAAATGGCGAACCTTCTAATGCAGACAAAGAG
AATATCGAGCAAAGTCGTGAATCTGAGTTCTCTGGTGATACTGATAAGTATCACAATGAG
AGTACTGATCTTGCTTCACAGAAAAATGATTTCTTGAACTTGCAATACGCTCAGGGTGAA
GATTCTTTGGCAACTGTTGGCTGTACAGAGCTTAATATTTGTGTGAAGTGTCATGAGGGG
GGGAACTTATTAGTTTGTAGTTCTGAGACTTGCTCTTTGGTGGTTCATGAGAGTTGCTTG
GGTTCTGTATTCAACTTTTATTACAAAGGAAGCTTCTATTGCCCCTTTTGTACATATTCT
CGAGTCATTTCTGAGAACCTGGAAGGTAAGAAGAAGGCCTCACTTGCTAAGAATGATTTG
ACTGCATTTATTGGCTTGGGAGCTGGACAACAATCAAAGAAGTCACTACCTAGGTCACAA
GGAATGAAGAAGCATCAATATCAAGAGGATACAATTGTACAGTTGTGCCGCAATGTAAAG
GGTAAGAATTCATTGAATGAGAATAGAAACAAAAATTCTTTAGAGAAGGATGGAGAAGCA
AGAAGTCGTCCAGTCACTACAAATTCAATGCGTGCCAAAGTCACGCAGATCCATCCACCT
CAACCACATGTTCCTCATGAACATGTGTGCCAAGAAAATTCTGAAGAAGAACAAGATGAG
ATAGGTTCCAGATACCATGTACAATCTAGGAATCAAGTAAACAATCCCTGTCCCTGGATT
CCTAAACTGAGGAGGAAGAACCTCCCATGGACAAAAATGGAGGAGAAAACATTAAAGGAG
GGATTTCTACGATTCTCAGATTGTGGTGATAGATGGAAGAGGATTTTGGCATTTGGAGGT
GATGTTTTCCTGAAAGCTCGGACATCCGGGGACCTCAAAGATAAGTGGAGAAACATTAGC
AGAGCAAGCAAGAAAGCAACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400031444
PEP Infomation

pacid=37438957 transcript=PGSC0003DMT400046469 locus=PGSC0003DMG400018039 ID=PGSC0003DMT400046469.v4.03 annot-version=v4.03
Sequence

MVSEALQQFFMATKLACSSSLPWIWVIEALATSSEIDTSLLINLLKRTPEISDDLGRNAR
EMVSLRVLESLFVQKNSDANSVASVPGEKVELDPSRDCEDVLRCILLEVSASNLKTATPD
MLKWDVLSFIMKKRSILPKCHLQQFKDAIVKSTNPFSTSLKERSGLELGNHYRDSVTADA
IDCDGFNEGHEIGGVNTRRSAPTEYLDTSTQGNKNGLQENQPGSTLLPVKRSFNAPSAYE
ATPEKSSDPCAKAAKKFKQDVAGPIQNTVPDLISSQRDGVPAESCGGSQSIVQKRNSEDD
GTLKANGCLKDGKAKHAASASVLCGIDSSIKDRLPQRMSSDKKFQSIESSSNCCAELGTS
SDSSLRVIQQDSRTCGSKGDMDYNLPQDLQNGEPSNADKENIEQSRESEFSGDTDKYHNE
STDLASQKNDFLNLQYAQGEDSLATVGCTELNICVKCHEGGNLLVCSSETCSLVVHESCL
GSVFNFYYKGSFYCPFCTYSRVISENLEGKKKASLAKNDLTAFIGLGAGQQSKKSLPRSQ
GMKKHQYQEDTIVQLCRNVKGKNSLNENRNKNSLEKDGEARSRPVTTNSMRAKVTQIHPP
QPHVPHEHVCQENSEEEQDEIGSRYHVQSRNQVNNPCPWIPKLRRKNLPWTKMEEKTLKE
GFLRFSDCGDRWKRILAFGGDVFLKARTSGDLKDKWRNISRASKKAT*

Transcript Sequence

Transcript ID

PGSC0003DMT400046469
Transcript Infomation

pacid=37438957 locus=PGSC0003DMG400018039 ID=PGSC0003DMT400046469.v4.03 annot-version=v4.03
Sequence

ATGGTCTCTGAAGCACTGCAACAGTTTTTCATGGCTACCAAACTTGCATGTTCATCATCT
CTGCCATGGATTTGGGTGATTGAAGCACTGGCAACTTCCAGTGAGATAGACACATCTTTA
CTCATCAATTTGCTTAAGAGGACTCCTGAAATCTCTGATGATCTGGGGAGAAATGCAAGG
GAAATGGTTTCCTTGAGAGTTTTAGAGAGCTTATTTGTTCAGAAAAACTCAGATGCAAAT
AGTGTTGCTTCAGTTCCAGGTGAGAAAGTTGAACTTGATCCGTCAAGGGACTGTGAAGAT
GTCCTTCGCTGCATATTGTTGGAGGTGTCTGCATCAAATCTAAAAACAGCTACGCCAGAT
ATGTTAAAGTGGGATGTTCTCTCATTCATTATGAAAAAGAGATCTATCTTGCCGAAGTGT
CACTTGCAACAATTTAAAGATGCCATTGTGAAATCGACGAATCCTTTTTCCACTTCCTTG
AAAGAAAGAAGTGGATTGGAGTTGGGGAACCACTACAGAGACAGTGTTACTGCTGATGCT
ATTGATTGTGATGGCTTTAACGAGGGACATGAAATAGGAGGTGTGAATACCCGACGTTCT
GCACCAACTGAGTACTTGGATACTTCAACACAGGGCAACAAGAATGGCCTGCAAGAAAAT
CAGCCTGGAAGCACTCTGCTGCCGGTTAAGAGAAGTTTTAATGCCCCTAGTGCTTATGAA
GCCACACCAGAGAAAAGTTCTGATCCATGTGCAAAGGCTGCCAAAAAGTTTAAGCAGGAT
GTTGCTGGTCCCATTCAGAACACTGTTCCTGATTTGATATCGTCTCAAAGAGATGGAGTC
CCAGCAGAATCATGTGGAGGAAGTCAATCTATTGTTCAAAAAAGGAACTCGGAAGATGAT
GGTACCCTCAAAGCAAATGGATGCCTGAAGGATGGTAAAGCAAAGCATGCTGCATCAGCA
AGTGTTTTATGTGGCATTGACTCTAGTATCAAGGATCGGTTGCCTCAAAGAATGAGTTCA
GACAAGAAGTTCCAAAGTATTGAAAGTAGCAGCAATTGTTGTGCTGAACTGGGAACATCA
AGTGACTCATCCCTGCGTGTGATTCAGCAGGATTCTCGCACTTGTGGCTCCAAAGGTGAC
ATGGATTATAATCTTCCACAAGATCTGCAAAATGGCGAACCTTCTAATGCAGACAAAGAG
AATATCGAGCAAAGTCGTGAATCTGAGTTCTCTGGTGATACTGATAAGTATCACAATGAG
AGTACTGATCTTGCTTCACAGAAAAATGATTTCTTGAACTTGCAATACGCTCAGGGTGAA
GATTCTTTGGCAACTGTTGGCTGTACAGAGCTTAATATTTGTGTGAAGTGTCATGAGGGG
GGGAACTTATTAGTTTGTAGTTCTGAGACTTGCTCTTTGGTGGTTCATGAGAGTTGCTTG
GGTTCTGTATTCAACTTTTATTACAAAGGAAGCTTCTATTGCCCCTTTTGTACATATTCT
CGAGTCATTTCTGAGAACCTGGAAGGTAAGAAGAAGGCCTCACTTGCTAAGAATGATTTG
ACTGCATTTATTGGCTTGGGAGCTGGACAACAATCAAAGAAGTCACTACCTAGGTCACAA
GGAATGAAGAAGCATCAATATCAAGAGGATACAATTGTACAGTTGTGCCGCAATGTAAAG
GGTAAGAATTCATTGAATGAGAATAGAAACAAAAATTCTTTAGAGAAGGATGGAGAAGCA
AGAAGTCGTCCAGTCACTACAAATTCAATGCGTGCCAAAGTCACGCAGATCCATCCACCT
CAACCACATGTTCCTCATGAACATGTGTGCCAAGAAAATTCTGAAGAAGAACAAGATGAG
ATAGGTTCCAGATACCATGTACAATCTAGGAATCAAGTAAACAATCCCTGTCCCTGGATT
CCTAAACTGAGGAGGAAGAACCTCCCATGGACAAAAATGGAGGAGAAAACATTAAAGGAG
GGATTTCTACGATTCTCAGATTGTGGTGATAGATGGAAGAGGATTTTGGCATTTGGAGGT
GATGTTTTCCTGAAAGCTCGGACATCCGGGGACCTCAAAGATAAGTGGAGAAACATTAGC
AGAGCAAGCAAGAAAGCAACATAA