Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046467
CDS Infomation

pacid=37460842 polypeptide=PGSC0003DMP400031442 locus=PGSC0003DMG400018038 ID=PGSC0003DMT400046467.v4.03 annot-version=v4.03
Sequence

ATGTCAAATTATAAGTTCAATTCTTTACTCCTTATACTCTGTTCTCTTTCTCTGTTCTTA
AACCAATCCTTGTCCAATACCGATGATCAAGAAACGAGTGATCATGACATTAACTGGTGG
TGTAGCAAAACTCCTCATCCTGATCCATGTAATCACTTCATGTCATCCGGTGATATCAAA
CCCAAAAATAATTCCGAGTTTCGGACCATGACGGTCCAAGTGGCTATGGATCATGTAATA
CAAGTGCAGAGTCATGCAAAGAATGTAAGCCAAAATTGCAGAGGAAAACGAAAGAAATTA
GTGTGGATGGATTGTGAAAAGCTCATGGATGATACTATCCTCCAATTGAGCCGTAGTCTT
GATGGCATCAAATCAAATTCAAGTTCTGATTTTGATGCACAAACTTGGCTCAGTGCCTCC
TTGACTAACATCGAGACCTGTCTATCAGGATCAATAGATCTCAATGTTTCCAACATCCTC
CAGCCGAATTTATCCACTAACGTTTCTCAGCTGATTAGTAACTGTTTAGCTGTGAATGGG
GAGTTCATGGACGCGGAAAATACAACACAAGTTGGTGGATTTCCAAATTGGCTTACGAAT
ACGGAAAGGAAGCTGTTGCAAACCTCATCGATCGATTTGATGGCTACTAAGGCGAATTAT
GTGGTGGCTAAAGATAAATCAGGTCGATTTCGGTCCATTCAGACTGCAATAAACTATGCA
GCATCAAAGAGAGTTGGAAATGAAAGAATCGTTATATATATCAAAAGGGGTGTTTATAAA
GAGAATATTTTGGTAGGTCCTACGATGGGGAAAATCATGTTAGTTGGTGATGGCTTAAGA
TACACTATAATCACAGGAAGTCGCAGTGTTGCTGCTGGTTTCACAACTTACAGTACTGCA
ACTGTTGGGGTGGATGGAATTGGATTCGTTGCACGAGGCATCACATTCCGAAACACAGCA
GGGCCACAAAACGGTCAAGCAGTAGCTCTACGATCAGCATCTGATCTATCAGTATTCTAT
GCTTGTGGTTTCGAAGGCTATCAAGACACCCTATTTGTCCAATCTCAACGACAATTCTAC
AAATCATGTTATATCTACGGAACCATAGATTTCATCTTTGGCAACGCTGCAGTTGTTTTC
CAAAATTGCATGATTTACGTCCGTAAACCATTATGGGGACAAGTAAACGTGATCACAGCA
CAAGGAAGAAACGATCCTTTTCAAAATACAGCAATTTCAATTCACAACTCTAGGATTATG
GCAGCTCCCGATCTTCGTCCAGTAATTGGATCGTTCCAAACATATTTAGGACGTCCATGG
CAACAATATTCGAGAACGGTTATCATGAAGACTTATTTAGATACATTGGTTAATCGAGCA
GGATGGTTGACGTGGTTAGATTCTAATTTTGCTTTGAGTACGTTGTACTATGCGGAATAT
GGTAATATTGGACCAGCGTCTTCGACTAGGTTTAGGGTGAAGTGGCCTGGTTATCATGTC
ATAACAAATGGGAATGTTGCTTCTAAGTATACTGTTGCAAGCCTTATAGCTGGCCGGGCG
TGGTTGCCTTCAACTGGGGTGCCATTCACTGCGGGGCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031442
PEP Infomation

pacid=37460842 transcript=PGSC0003DMT400046467 locus=PGSC0003DMG400018038 ID=PGSC0003DMT400046467.v4.03 annot-version=v4.03
Sequence

MSNYKFNSLLLILCSLSLFLNQSLSNTDDQETSDHDINWWCSKTPHPDPCNHFMSSGDIK
PKNNSEFRTMTVQVAMDHVIQVQSHAKNVSQNCRGKRKKLVWMDCEKLMDDTILQLSRSL
DGIKSNSSSDFDAQTWLSASLTNIETCLSGSIDLNVSNILQPNLSTNVSQLISNCLAVNG
EFMDAENTTQVGGFPNWLTNTERKLLQTSSIDLMATKANYVVAKDKSGRFRSIQTAINYA
ASKRVGNERIVIYIKRGVYKENILVGPTMGKIMLVGDGLRYTIITGSRSVAAGFTTYSTA
TVGVDGIGFVARGITFRNTAGPQNGQAVALRSASDLSVFYACGFEGYQDTLFVQSQRQFY
KSCYIYGTIDFIFGNAAVVFQNCMIYVRKPLWGQVNVITAQGRNDPFQNTAISIHNSRIM
AAPDLRPVIGSFQTYLGRPWQQYSRTVIMKTYLDTLVNRAGWLTWLDSNFALSTLYYAEY
GNIGPASSTRFRVKWPGYHVITNGNVASKYTVASLIAGRAWLPSTGVPFTAGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400046467
Transcript Infomation

pacid=37460842 locus=PGSC0003DMG400018038 ID=PGSC0003DMT400046467.v4.03 annot-version=v4.03
Sequence

ATGTCAAATTATAAGTTCAATTCTTTACTCCTTATACTCTGTTCTCTTTCTCTGTTCTTA
AACCAATCCTTGTCCAATACCGATGATCAAGAAACGAGTGATCATGACATTAACTGGTGG
TGTAGCAAAACTCCTCATCCTGATCCATGTAATCACTTCATGTCATCCGGTGATATCAAA
CCCAAAAATAATTCCGAGTTTCGGACCATGACGGTCCAAGTGGCTATGGATCATGTAATA
CAAGTGCAGAGTCATGCAAAGAATGTAAGCCAAAATTGCAGAGGAAAACGAAAGAAATTA
GTGTGGATGGATTGTGAAAAGCTCATGGATGATACTATCCTCCAATTGAGCCGTAGTCTT
GATGGCATCAAATCAAATTCAAGTTCTGATTTTGATGCACAAACTTGGCTCAGTGCCTCC
TTGACTAACATCGAGACCTGTCTATCAGGATCAATAGATCTCAATGTTTCCAACATCCTC
CAGCCGAATTTATCCACTAACGTTTCTCAGCTGATTAGTAACTGTTTAGCTGTGAATGGG
GAGTTCATGGACGCGGAAAATACAACACAAGTTGGTGGATTTCCAAATTGGCTTACGAAT
ACGGAAAGGAAGCTGTTGCAAACCTCATCGATCGATTTGATGGCTACTAAGGCGAATTAT
GTGGTGGCTAAAGATAAATCAGGTCGATTTCGGTCCATTCAGACTGCAATAAACTATGCA
GCATCAAAGAGAGTTGGAAATGAAAGAATCGTTATATATATCAAAAGGGGTGTTTATAAA
GAGAATATTTTGGTAGGTCCTACGATGGGGAAAATCATGTTAGTTGGTGATGGCTTAAGA
TACACTATAATCACAGGAAGTCGCAGTGTTGCTGCTGGTTTCACAACTTACAGTACTGCA
ACTGTTGGGGTGGATGGAATTGGATTCGTTGCACGAGGCATCACATTCCGAAACACAGCA
GGGCCACAAAACGGTCAAGCAGTAGCTCTACGATCAGCATCTGATCTATCAGTATTCTAT
GCTTGTGGTTTCGAAGGCTATCAAGACACCCTATTTGTCCAATCTCAACGACAATTCTAC
AAATCATGTTATATCTACGGAACCATAGATTTCATCTTTGGCAACGCTGCAGTTGTTTTC
CAAAATTGCATGATTTACGTCCGTAAACCATTATGGGGACAAGTAAACGTGATCACAGCA
CAAGGAAGAAACGATCCTTTTCAAAATACAGCAATTTCAATTCACAACTCTAGGATTATG
GCAGCTCCCGATCTTCGTCCAGTAATTGGATCGTTCCAAACATATTTAGGACGTCCATGG
CAACAATATTCGAGAACGGTTATCATGAAGACTTATTTAGATACATTGGTTAATCGAGCA
GGATGGTTGACGTGGTTAGATTCTAATTTTGCTTTGAGTACGTTGTACTATGCGGAATAT
GGTAATATTGGACCAGCGTCTTCGACTAGGTTTAGGGTGAAGTGGCCTGGTTATCATGTC
ATAACAAATGGGAATGTTGCTTCTAAGTATACTGTTGCAAGCCTTATAGCTGGCCGGGCG
TGGTTGCCTTCAACTGGGGTGCCATTCACTGCGGGGCTGTGA