Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046382
CDS Infomation

pacid=37434863 polypeptide=PGSC0003DMP400031391 locus=PGSC0003DMG400018004 ID=PGSC0003DMT400046382.v4.03 annot-version=v4.03
Sequence

ATGGAAGAGATGTTTCCAGCACTTACTGTATCATATAAACAGGGAAAATTGATATATGAT
GAATCAGTATTACCCACATGTATTGACTTCGCTGAATATGAGCTGATCCCGAATACGACT
AGCTTGCTATCAGAACCTAACAAGTGCAAACTTCCTTGTTCGGTGTCGAATCATAGTGTG
TCCAGGGACAAAGCTAACCTCTTTATGACAGTTGCTGATTGCCATGAAATCAGGAAAGGG
AAGAGTTTTTCTTCGACAGTTGTAGCTAATGGGAATTGTTTGATTGCTAGTGAGGTAAAA
GATGGTAGATCTATGGACAACAATTTGATTTCACCAACTGATGAGCTTTTAGGAAATATG
ACTTGTTCTGATTCTCTAGTGGATGAGTGTGGCGGCATGCCTAACCAAGAATGTACAGAT
TTGGAGGTTAAAGTTGGGAGAACTCCTCCTCGGAATGAAGACAAGAAGGTTGGTGTATCC
CAGATTCTGAGGAAGTCTTTTTCGTGTAATTTGGCTAAAGAGTTGGTTAATGAGTCAGAA
CTTGTAAGTGATCTTGTTTCCACTATGGTTGTGGGTGCTGAAGATTATAAAAGAAAATTA
TCACCATCCCATCTTGAGACCTCACAAGAGATAAAGATAAGTAGGCCAAATGCCTTTTGT
TTTGATTCTGTACCGCTTTGGGGGATCATCACGATACAAGGAAAGAGGCCGGAGATGGAA
GATACTGCTATAGCTTTACCAAGGTTTCTGAGAATCCCTTCCCATATTTTGACGGATGCG
CCAGTTTCTCATGCCCTGAGTCAAACACTTACAGCCCATTTATATGGGGTTTATGATGGA
CATGGAGGCTCTCAGCAGGTTGCTAATTATTGTCATGAGCGTCTCCATATGGTTTTAGCA
CAGGAGATAGATATTATGAAAGAGGATTCACATAATGGAAGTGTTAACTGGAAGGAGCAA
TGGTCAAAGGCTTTCTTGAATTGTTTCTGTAGAGTCGATGATGAGGTAGGAGGGTTCTGT
AGTGAAACAGACGGGATTGAGCCTGACCTTTCAGTCATTGCTCCCGAAGCAGTTGGATCT
ACAGCTGTAGTTGCAGTTGTTAGTCCAACCCATATTATTGTTGCTAATTGTGGTGATTCA
AGGGCAGTCCTTTGTCGGGGAAAACTGCCCATGCCATTATCCATTGACCATAAGCCAAAT
AGGGAAGATGAGTGTTCACGAATAGAAGAATTGGGAGGGAAGGTCATTAATTGGGATGGA
CATCGCGTTTCTGGTGTTCTTGCAGTTTCAAGGTCAATTGGTGATAGATATTTAAGGCCT
TATGTGATTCCAGATCCAGAAATGATGTTTGTACCCCGAGCAAAAGAAGACGACTGTCTA
ATTTTAGCAAGTGATGGCCTATGGGATGTCTTGACAAATGAAGAAGCTTGTGATGTGGCC
CGGAGACGAATTCTTCTCTGGCACAAAAAGAATGGTGGTACTTTGAGTAGCGAAAGGGGT
GAAAATGTTGATCCTGCTGCTCAGGATGCTGCAGAGTACTTGACACGAGTTGCTCTCCAA
AGGGGGAGCAGAGATAATATATCTGTGATTGTGGTCGACTTGAAAGCACAGAGGAAATTC
AAGAAGAAAACGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400031391
PEP Infomation

pacid=37434863 transcript=PGSC0003DMT400046382 locus=PGSC0003DMG400018004 ID=PGSC0003DMT400046382.v4.03 annot-version=v4.03
Sequence

MEEMFPALTVSYKQGKLIYDESVLPTCIDFAEYELIPNTTSLLSEPNKCKLPCSVSNHSV
SRDKANLFMTVADCHEIRKGKSFSSTVVANGNCLIASEVKDGRSMDNNLISPTDELLGNM
TCSDSLVDECGGMPNQECTDLEVKVGRTPPRNEDKKVGVSQILRKSFSCNLAKELVNESE
LVSDLVSTMVVGAEDYKRKLSPSHLETSQEIKISRPNAFCFDSVPLWGIITIQGKRPEME
DTAIALPRFLRIPSHILTDAPVSHALSQTLTAHLYGVYDGHGGSQQVANYCHERLHMVLA
QEIDIMKEDSHNGSVNWKEQWSKAFLNCFCRVDDEVGGFCSETDGIEPDLSVIAPEAVGS
TAVVAVVSPTHIIVANCGDSRAVLCRGKLPMPLSIDHKPNREDECSRIEELGGKVINWDG
HRVSGVLAVSRSIGDRYLRPYVIPDPEMMFVPRAKEDDCLILASDGLWDVLTNEEACDVA
RRRILLWHKKNGGTLSSERGENVDPAAQDAAEYLTRVALQRGSRDNISVIVVDLKAQRKF
KKKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400046382
Transcript Infomation

pacid=37434863 locus=PGSC0003DMG400018004 ID=PGSC0003DMT400046382.v4.03 annot-version=v4.03
Sequence

ATGGAAGAGATGTTTCCAGCACTTACTGTATCATATAAACAGGGAAAATTGATATATGAT
GAATCAGTATTACCCACATGTATTGACTTCGCTGAATATGAGCTGATCCCGAATACGACT
AGCTTGCTATCAGAACCTAACAAGTGCAAACTTCCTTGTTCGGTGTCGAATCATAGTGTG
TCCAGGGACAAAGCTAACCTCTTTATGACAGTTGCTGATTGCCATGAAATCAGGAAAGGG
AAGAGTTTTTCTTCGACAGTTGTAGCTAATGGGAATTGTTTGATTGCTAGTGAGGTAAAA
GATGGTAGATCTATGGACAACAATTTGATTTCACCAACTGATGAGCTTTTAGGAAATATG
ACTTGTTCTGATTCTCTAGTGGATGAGTGTGGCGGCATGCCTAACCAAGAATGTACAGAT
TTGGAGGTTAAAGTTGGGAGAACTCCTCCTCGGAATGAAGACAAGAAGGTTGGTGTATCC
CAGATTCTGAGGAAGTCTTTTTCGTGTAATTTGGCTAAAGAGTTGGTTAATGAGTCAGAA
CTTGTAAGTGATCTTGTTTCCACTATGGTTGTGGGTGCTGAAGATTATAAAAGAAAATTA
TCACCATCCCATCTTGAGACCTCACAAGAGATAAAGATAAGTAGGCCAAATGCCTTTTGT
TTTGATTCTGTACCGCTTTGGGGGATCATCACGATACAAGGAAAGAGGCCGGAGATGGAA
GATACTGCTATAGCTTTACCAAGGTTTCTGAGAATCCCTTCCCATATTTTGACGGATGCG
CCAGTTTCTCATGCCCTGAGTCAAACACTTACAGCCCATTTATATGGGGTTTATGATGGA
CATGGAGGCTCTCAGCAGGTTGCTAATTATTGTCATGAGCGTCTCCATATGGTTTTAGCA
CAGGAGATAGATATTATGAAAGAGGATTCACATAATGGAAGTGTTAACTGGAAGGAGCAA
TGGTCAAAGGCTTTCTTGAATTGTTTCTGTAGAGTCGATGATGAGGTAGGAGGGTTCTGT
AGTGAAACAGACGGGATTGAGCCTGACCTTTCAGTCATTGCTCCCGAAGCAGTTGGATCT
ACAGCTGTAGTTGCAGTTGTTAGTCCAACCCATATTATTGTTGCTAATTGTGGTGATTCA
AGGGCAGTCCTTTGTCGGGGAAAACTGCCCATGCCATTATCCATTGACCATAAGCCAAAT
AGGGAAGATGAGTGTTCACGAATAGAAGAATTGGGAGGGAAGGTCATTAATTGGGATGGA
CATCGCGTTTCTGGTGTTCTTGCAGTTTCAAGGTCAATTGGTGATAGATATTTAAGGCCT
TATGTGATTCCAGATCCAGAAATGATGTTTGTACCCCGAGCAAAAGAAGACGACTGTCTA
ATTTTAGCAAGTGATGGCCTATGGGATGTCTTGACAAATGAAGAAGCTTGTGATGTGGCC
CGGAGACGAATTCTTCTCTGGCACAAAAAGAATGGTGGTACTTTGAGTAGCGAAAGGGGT
GAAAATGTTGATCCTGCTGCTCAGGATGCTGCAGAGTACTTGACACGAGTTGCTCTCCAA
AGGGGGAGCAGAGATAATATATCTGTGATTGTGGTCGACTTGAAAGCACAGAGGAAATTC
AAGAAGAAAACGTAG