Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046345
CDS Infomation

pacid=37441828 polypeptide=PGSC0003DMP400031369 locus=PGSC0003DMG402017989 ID=PGSC0003DMT400046345.v4.03 annot-version=v4.03
Sequence

ATGATGAATCCCAACCAGGACAAATATGTAAGGTTTGAGGATTGGAAGTCAGAACAATCA
TCCTTCAGCATTGACAATGAAAATTCTCAGGATAATAGGCCATTTTATGTCAGAAAACCA
TCATTAAGCTCGTTGATGAGCAGCGTTAAAAGAAGGTTCGAGAGGGGTTCTGAAAGAATT
AGTAGCTGGAGAAAATCAATTCGAGTGTATCCTCTAACTGATAAGCCAACAAAAGATCAA
TATGTAGAACCAAAGAAGAAAGTTCATGATCCTCAGGGGAGATTTCTTCAGCAATGGAAC
AAAGTATTTGTATTGGTTTGTATAATTGCTGTGTCACTGGATCCGTTGTTCTTCTACATT
CCTGTCATTGATAACGACAAAAAGTGCCTCGATTTGGACAGGACGCTAAAGATCACCGCT
TGTGTTCTTCGTTCTATCACTGATCTTTTCTATATCTTTCACATTATCTTGCAATTTCGT
ACTGGCTACATTGCTCCTCCTTCTCGAATATTTGGAAGAGGTGAGTTGGTTGAAGATTCC
TATGATATAGCCAAGCGATATTTGTTATCACATTTCATCGTTGACGTTGTAGCAGTCCTT
CCACTCCCACAGATTGTGATATTGGTTGTCACTCCCAACGCGAATGGCTCTATTGCTTTG
GCGACGAAAGAAATGTTAAAGATTGTCATTTTTGCTCAATATTTTCCAAGAATTTTTAGA
ATTTATCCATTGTGCAAAGAAGTAACAAGGACTTCAGGCTTATTTACTGAAAGTGCATGG
GGTGGAGCTGTTTTCAACCTTTCCCTCTACATGCTAGCCAGTAATGTAATTGGAGCATTT
TGGTATTTGTTCTCAGTAGAACGCCAAGATACATGCTGGCGCAATGCGTGTGCAAAGATC
CGTGGCTGTTCATTAGACTACTTATATTGTGTCAAAAGTTCGATTGAAAATGCTTCCTTA
CTGAATTCTTCTTGCCCTCTCGTGAAACAAGAAGATATACATGATCCAAATGTCTTTGAT
TTTGGAATCGCTCTTGATGCTCTTCAGTTTCGGATTGTGGAGAAAAGGAAATTCTGGACC
AAACTCTTCTATTGCTTTTGGTGGGGGCTGAGAAACTTAAGTTCTCTTGGCCAAAACCTG
AAGACAAGCACTTTCGTCGGAGAGATTCTCTTTGCCGTCTTCATCTCAATTATCGGGCTT
ATCTTGTTTTCCTTGCTTATTGGCAATATGCAGAAATATTTGCAATCTATCACGGTTAGA
GTAGAAGAGATGAGAGTGAGAAGGCGGGATGCAGAACAGTGGATGTCTCATCGCATGCTT
CCTGACAATCTGAAAGAGCGAATTAGACGACATGAACAGTACAAATGGCAAGAAACCAGG
GGAGTTGAGGAAGATTTACTGCTTCAAGATCTTCCTAGAGACTTGAGGAGAGATTTAAAG
CGCCATCTCTGTTGGTCTTTTCTCAAAAAAGTTCCCATATTTGAGAAAATGGATGACCAA
TTACTGGACGCGTTGTGTGACAGACTGAAGCCAGCACTCTTCACAGATAAGAGCTTCATA
ATCCGAGAAGGCGATCCAGTAGAAGAAATGCTCTTTCTAATGAGAGGTACACTGTTAACT
ATGACCACAAATGGTGGAAGGACTGGTTTTTTCAACTCTGTTCATCTCAAAGCTGGTGGC
TTCTGTGGAGATGAGCTTTTAACATGGGCTTTAGACCCTCATCCTTCCTCCAGTAGTCTT
CCAATTTCGACTAGAACAGTACAGGCTGTAACTGATATAGAAGCTTTTGCCGTCACTGCT
GATGACCTCAAGTTTGTCGCCGCACAGTTTAGACGTCTAAATAGCAAGCAGATTCGGCAT
ACTTTCAAGTTCTGCTCACAGCACTGGAGGACATGGGGTGCATGCTTTATACAAGTAGCA
TGGCGTCGATACTGCAGGAATAAGCTCGAGAAATCTTTACGAGAGGAAGAAGATAGACTG
CAGGCTGCATTGGCAAAAGAGAACACAAATACAACAAGTCTTGGAGCTACCATTTATGCA
TCAAGGTTTGCTGCTAATGCTCTGCGCGCCTTGCGACGTAAGCACGCAACTGGTGCAAAA
TTATCTCCCACATTACCTCTGCTGCTTCATAAACCATCCGAACCAGATTTCAGTGAGGAA
AATGATTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400031369
PEP Infomation

pacid=37441828 transcript=PGSC0003DMT400046345 locus=PGSC0003DMG402017989 ID=PGSC0003DMT400046345.v4.03 annot-version=v4.03
Sequence

MMNPNQDKYVRFEDWKSEQSSFSIDNENSQDNRPFYVRKPSLSSLMSSVKRRFERGSERI
SSWRKSIRVYPLTDKPTKDQYVEPKKKVHDPQGRFLQQWNKVFVLVCIIAVSLDPLFFYI
PVIDNDKKCLDLDRTLKITACVLRSITDLFYIFHIILQFRTGYIAPPSRIFGRGELVEDS
YDIAKRYLLSHFIVDVVAVLPLPQIVILVVTPNANGSIALATKEMLKIVIFAQYFPRIFR
IYPLCKEVTRTSGLFTESAWGGAVFNLSLYMLASNVIGAFWYLFSVERQDTCWRNACAKI
RGCSLDYLYCVKSSIENASLLNSSCPLVKQEDIHDPNVFDFGIALDALQFRIVEKRKFWT
KLFYCFWWGLRNLSSLGQNLKTSTFVGEILFAVFISIIGLILFSLLIGNMQKYLQSITVR
VEEMRVRRRDAEQWMSHRMLPDNLKERIRRHEQYKWQETRGVEEDLLLQDLPRDLRRDLK
RHLCWSFLKKVPIFEKMDDQLLDALCDRLKPALFTDKSFIIREGDPVEEMLFLMRGTLLT
MTTNGGRTGFFNSVHLKAGGFCGDELLTWALDPHPSSSSLPISTRTVQAVTDIEAFAVTA
DDLKFVAAQFRRLNSKQIRHTFKFCSQHWRTWGACFIQVAWRRYCRNKLEKSLREEEDRL
QAALAKENTNTTSLGATIYASRFAANALRALRRKHATGAKLSPTLPLLLHKPSEPDFSEE
NDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400046345
Transcript Infomation

pacid=37441828 locus=PGSC0003DMG402017989 ID=PGSC0003DMT400046345.v4.03 annot-version=v4.03
Sequence

ATGATGAATCCCAACCAGGACAAATATGTAAGGTTTGAGGATTGGAAGTCAGAACAATCA
TCCTTCAGCATTGACAATGAAAATTCTCAGGATAATAGGCCATTTTATGTCAGAAAACCA
TCATTAAGCTCGTTGATGAGCAGCGTTAAAAGAAGGTTCGAGAGGGGTTCTGAAAGAATT
AGTAGCTGGAGAAAATCAATTCGAGTGTATCCTCTAACTGATAAGCCAACAAAAGATCAA
TATGTAGAACCAAAGAAGAAAGTTCATGATCCTCAGGGGAGATTTCTTCAGCAATGGAAC
AAAGTATTTGTATTGGTTTGTATAATTGCTGTGTCACTGGATCCGTTGTTCTTCTACATT
CCTGTCATTGATAACGACAAAAAGTGCCTCGATTTGGACAGGACGCTAAAGATCACCGCT
TGTGTTCTTCGTTCTATCACTGATCTTTTCTATATCTTTCACATTATCTTGCAATTTCGT
ACTGGCTACATTGCTCCTCCTTCTCGAATATTTGGAAGAGGTGAGTTGGTTGAAGATTCC
TATGATATAGCCAAGCGATATTTGTTATCACATTTCATCGTTGACGTTGTAGCAGTCCTT
CCACTCCCACAGATTGTGATATTGGTTGTCACTCCCAACGCGAATGGCTCTATTGCTTTG
GCGACGAAAGAAATGTTAAAGATTGTCATTTTTGCTCAATATTTTCCAAGAATTTTTAGA
ATTTATCCATTGTGCAAAGAAGTAACAAGGACTTCAGGCTTATTTACTGAAAGTGCATGG
GGTGGAGCTGTTTTCAACCTTTCCCTCTACATGCTAGCCAGTAATGTAATTGGAGCATTT
TGGTATTTGTTCTCAGTAGAACGCCAAGATACATGCTGGCGCAATGCGTGTGCAAAGATC
CGTGGCTGTTCATTAGACTACTTATATTGTGTCAAAAGTTCGATTGAAAATGCTTCCTTA
CTGAATTCTTCTTGCCCTCTCGTGAAACAAGAAGATATACATGATCCAAATGTCTTTGAT
TTTGGAATCGCTCTTGATGCTCTTCAGTTTCGGATTGTGGAGAAAAGGAAATTCTGGACC
AAACTCTTCTATTGCTTTTGGTGGGGGCTGAGAAACTTAAGTTCTCTTGGCCAAAACCTG
AAGACAAGCACTTTCGTCGGAGAGATTCTCTTTGCCGTCTTCATCTCAATTATCGGGCTT
ATCTTGTTTTCCTTGCTTATTGGCAATATGCAGAAATATTTGCAATCTATCACGGTTAGA
GTAGAAGAGATGAGAGTGAGAAGGCGGGATGCAGAACAGTGGATGTCTCATCGCATGCTT
CCTGACAATCTGAAAGAGCGAATTAGACGACATGAACAGTACAAATGGCAAGAAACCAGG
GGAGTTGAGGAAGATTTACTGCTTCAAGATCTTCCTAGAGACTTGAGGAGAGATTTAAAG
CGCCATCTCTGTTGGTCTTTTCTCAAAAAAGTTCCCATATTTGAGAAAATGGATGACCAA
TTACTGGACGCGTTGTGTGACAGACTGAAGCCAGCACTCTTCACAGATAAGAGCTTCATA
ATCCGAGAAGGCGATCCAGTAGAAGAAATGCTCTTTCTAATGAGAGGTACACTGTTAACT
ATGACCACAAATGGTGGAAGGACTGGTTTTTTCAACTCTGTTCATCTCAAAGCTGGTGGC
TTCTGTGGAGATGAGCTTTTAACATGGGCTTTAGACCCTCATCCTTCCTCCAGTAGTCTT
CCAATTTCGACTAGAACAGTACAGGCTGTAACTGATATAGAAGCTTTTGCCGTCACTGCT
GATGACCTCAAGTTTGTCGCCGCACAGTTTAGACGTCTAAATAGCAAGCAGATTCGGCAT
ACTTTCAAGTTCTGCTCACAGCACTGGAGGACATGGGGTGCATGCTTTATACAAGTAGCA
TGGCGTCGATACTGCAGGAATAAGCTCGAGAAATCTTTACGAGAGGAAGAAGATAGACTG
CAGGCTGCATTGGCAAAAGAGAACACAAATACAACAAGTCTTGGAGCTACCATTTATGCA
TCAAGGTTTGCTGCTAATGCTCTGCGCGCCTTGCGACGTAAGCACGCAACTGGTGCAAAA
TTATCTCCCACATTACCTCTGCTGCTTCATAAACCATCCGAACCAGATTTCAGTGAGGAA
AATGATTCATGA