Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046257
CDS Infomation

pacid=37438331 polypeptide=PGSC0003DMP400031318 locus=PGSC0003DMG400017957 ID=PGSC0003DMT400046257.v4.03 annot-version=v4.03
Sequence

ATGGACAAACAACAAAGAACCGGCGAATCGGAAAAAGACGACGACGGCGCCGGAATACTT
TGCCGGTTCGCCCATCTCGTTTTTCCATACTTAGAGCCTGCCGGTCTAGCCTCCGTTTCA
GCAACCTGCAAGGTGTTACATGTAGTTTCCAAGACTATTACTTCCAGTCGAATCTCCGAT
GCTTCTAGAAACTTGGAGAATTACCCTATTCCTTTCTTCAACTTCGTCGACTCCGAACTT
TACGCCAATTTCATCTATTCCCCTGTTCAGACCTTACCTACCTCTCCATCCATCCCCTGG
GGAGGTGGATCGGGTCGGGTTAGGTCGGACCCGTTTATAGTCCGGGTGGAGGGTGCTTAT
GGATGCGATTGTGAGAGTTGCGACTTGGACTCCGGTTCTAATTGCGCATGTATGGATTTT
TCTGATTTGCCGACCCGAGAATGCGGGCCAAGTTGCGGTTGCGGGTTGGAGTGCGGTAAT
AGGTTAACTCAGAAAGGAATTTCAGTGAAGCTGAAGGTTGTGAAGGATAGGAGAAAAGGC
TGGAGCTTGTGTGCTGCTGAATTCATTCCAAAAGGGAAATTCATATGCGAGTATACAGGA
GAACTTTTGACCACTGAGGAAGCAAGAAATCGCCAGAGGCTATATGACAAACTTTCAAAG
AGTGGCCACTTTTCGCCTGCACTCCTGGTTGTGAAGGAGCACCTTCCATCTGGAAATGCG
TGTATGAGGATCAACATTGATGCTACCAGAATTGGCAATATTGCCCGCTTCATTAACCAT
TCCTGTGATGGTGGTAACCTTTCTACATTGATAGTGCGAAGTTCTGGAGCTCTGCTACCC
AGAGTCTGCTTTTTGTCTTCCAGGGTCATTTTGGAAAATGAAGAGCTCGCTTTCAGTTAT
GGGGACACTACAGTAAACTCTACAGGCTCTCAATGCTTTTGCAGTAGTGCTTGTTGTTCT
GGGATCCTTCCAGCAGAGCACACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400031318
PEP Infomation

pacid=37438331 transcript=PGSC0003DMT400046257 locus=PGSC0003DMG400017957 ID=PGSC0003DMT400046257.v4.03 annot-version=v4.03
Sequence

MDKQQRTGESEKDDDGAGILCRFAHLVFPYLEPAGLASVSATCKVLHVVSKTITSSRISD
ASRNLENYPIPFFNFVDSELYANFIYSPVQTLPTSPSIPWGGGSGRVRSDPFIVRVEGAY
GCDCESCDLDSGSNCACMDFSDLPTRECGPSCGCGLECGNRLTQKGISVKLKVVKDRRKG
WSLCAAEFIPKGKFICEYTGELLTTEEARNRQRLYDKLSKSGHFSPALLVVKEHLPSGNA
CMRINIDATRIGNIARFINHSCDGGNLSTLIVRSSGALLPRVCFLSSRVILENEELAFSY
GDTTVNSTGSQCFCSSACCSGILPAEHT*

Transcript Sequence

Transcript ID

PGSC0003DMT400046257
Transcript Infomation

pacid=37438331 locus=PGSC0003DMG400017957 ID=PGSC0003DMT400046257.v4.03 annot-version=v4.03
Sequence

ATGGACAAACAACAAAGAACCGGCGAATCGGAAAAAGACGACGACGGCGCCGGAATACTT
TGCCGGTTCGCCCATCTCGTTTTTCCATACTTAGAGCCTGCCGGTCTAGCCTCCGTTTCA
GCAACCTGCAAGGTGTTACATGTAGTTTCCAAGACTATTACTTCCAGTCGAATCTCCGAT
GCTTCTAGAAACTTGGAGAATTACCCTATTCCTTTCTTCAACTTCGTCGACTCCGAACTT
TACGCCAATTTCATCTATTCCCCTGTTCAGACCTTACCTACCTCTCCATCCATCCCCTGG
GGAGGTGGATCGGGTCGGGTTAGGTCGGACCCGTTTATAGTCCGGGTGGAGGGTGCTTAT
GGATGCGATTGTGAGAGTTGCGACTTGGACTCCGGTTCTAATTGCGCATGTATGGATTTT
TCTGATTTGCCGACCCGAGAATGCGGGCCAAGTTGCGGTTGCGGGTTGGAGTGCGGTAAT
AGGTTAACTCAGAAAGGAATTTCAGTGAAGCTGAAGGTTGTGAAGGATAGGAGAAAAGGC
TGGAGCTTGTGTGCTGCTGAATTCATTCCAAAAGGGAAATTCATATGCGAGTATACAGGA
GAACTTTTGACCACTGAGGAAGCAAGAAATCGCCAGAGGCTATATGACAAACTTTCAAAG
AGTGGCCACTTTTCGCCTGCACTCCTGGTTGTGAAGGAGCACCTTCCATCTGGAAATGCG
TGTATGAGGATCAACATTGATGCTACCAGAATTGGCAATATTGCCCGCTTCATTAACCAT
TCCTGTGATGGTGGTAACCTTTCTACATTGATAGTGCGAAGTTCTGGAGCTCTGCTACCC
AGAGTCTGCTTTTTGTCTTCCAGGGTCATTTTGGAAAATGAAGAGCTCGCTTTCAGTTAT
GGGGACACTACAGTAAACTCTACAGGCTCTCAATGCTTTTGCAGTAGTGCTTGTTGTTCT
GGGATCCTTCCAGCAGAGCACACATGA