Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046254
CDS Infomation

pacid=37436516 polypeptide=PGSC0003DMP400031316 locus=PGSC0003DMG400017956 ID=PGSC0003DMT400046254.v4.03 annot-version=v4.03
Sequence

ATGGGAAGGGGAGGACGCGGCGGCGGCAGCGGTGGACGGAGGTCACTTTCCTCGGCGTTC
GATCGAGAGCTTCGCACCCACATTGAGTCCTGTAAGAACAATTATCTCTCCGTTGAAGAT
CTCGTCGACCACCTCCGTTCATCTTATCACAAGTATTCCCGCGAAAAGTTACAGCCGTTT
ACCAAACGGGTCCAAGATGTTCTGCAGCTCCAGAGCTCAAACCCTAACTCAACTGAAGAA
GTAACGCCTCCGAAAAAGAAGCCAAAAAGAGACGGCAGCGAGCAGAGATTGCAGCTCCTT
GAGAAGAAGCATATAATGAATAGTCAAAGAAAGAAGCAGGAAGGGGACGGTTCGTCGTCG
ACGACTCTCGCAAGTACTTCCGATAGTGATGATTCTCACTCTTCTTCATCTTCCGATGCT
ATTTATGGAGAGAAATTGGAAGACAAGCCTGATTTAATGAAGTCTATGCTTCGACATACG
TACAATCAACAGGTTAATGGTACTCCCAAGTCCAAAAAAATTGAATACGAGGTCATTCAT
GACAATAATGATGAAAAAAGGAAGAAACTTGTTATGTCTAAAGGAGGAGGACAACGAAGA
AACGGAGCCACTAAGGATTTAGGAGGAGGAGGAGTAGAGGGGGAAAGGTTTGGGGATAGT
GAAGGGAATGTTGATGGGCCAAAGTTTAAGGATTTAGGAGGAATGGATGGAGTGTTGGAG
GAATTGAAAATGGAGGTGATTGTTCCATTGTACCATCCTCAGCTGACTAAGCATCTTGGA
GTTAGGCCTATGTCAGGGATACTCTTACACGGGCCACCAGGCTGTGGTAAAACAAAACTA
GCTCATGCTATTGCCAATGAGACTCGAGTTCCATTCTACAAACTATCTGCTACTGAGTTG
GTCTCTGGAGTTTCAGGTGCATCAGAAGAGAACATAAGGGAACTGTTCTCAAAAGCATAC
CGGACAGCACCTTCTATTGTGTTTATTGATGAGATTGATGCAATTGCTGCCAAAAGAGAA
AATTTACAGAGAGAAATGGAGCGGCGCATTGTAACACAGCTAATGACGTGCATGGATGAG
TCACATAGACTTGTAAAACCTGATGATGCAAAGGGAACTGCTCTAGCCACTGATAAAAGA
AATAATGAAGCAAAATCAGACGGATCTAATGGTGGACCTGGTTATGTCCTAGTAATTGGG
GCGACAAATAGACCTGATGCTATTGACCCAGCATTGAGGAGGCCTGGACGATTCGACCGT
GAAATCGTCTTGGGTATTCCAGATGAAAATGCAAGGGTGCAAATTTTGTCTGTGCTTACA
CGTAACCTAAGAGTTGAAGGTGCATTTGATCTCACGAAGATAGCTAGCTCAACCCCAGGA
TTTGTCGGAGCAGACTTGGCTGCTCTAACTAACAAGGCAGGTAACTTGGCAATGAAGAGG
ATAATAGACGAGAGGAAGGTTGAGCTTTCAAGAGAATTGTCAGATGGTGAAGATGCCGAA
GAATGGTGGAGAAAGCCATGGTCACCTGAAGAGATGGAAAAGCTCAGCATTTTTATGGCT
GATTTTGAGGAAGCAGCTAAATTGATTCAACCTTCATCTAGAAGAGAAGGTTTCTCCGCT
ATCCCAAATGTTAAGTGGGAAGATGTTGGAGGCCTTGATTCGTTAAGACATGACTTTGAC
CGTTACATTGTCAGGCGTATAAAGAATCCTAAAGATTACATGGGTTTTGGAGTGGACTTG
GAAACAGGATTCTTGCTTTATGGTCCCCCGGGATGCGGTAAAACATTAATTGCCAAGGCT
GTTGCTAATGAAGCTGGAGCAAATTTTATACACATTAAGGGACCTGAAATTTTGAACAAG
TATGTTGGTGAAAGTGAGCTAACTATTCGGACATTATTTACCCGTGCAAGGACATGTGCT
CCATGCATTCTATTCTTCGATGAGATGGATGCATTGACAACTAAGCGTGGTAAAGAAGGA
GGTTGGGTCGTTGAAAGGCTTTTGAATCAGCTACTAATAGAACTAGACGGTGCTGATCAG
AGAAAAGGTGTTTATGTGATTGGTGCCACAAATAGGCCTGAAGTCATGGACCAAGCTATT
CTTCGACCTGGAAGGTTAGGGAGACTCCTATATGTCCCTCTACCTAGTCCAGATGAGCGT
GTACTAATTTTAAAAGCTCTTGCCCGGAAAAAGCCGATAGATTCTAGTGTCGACTTGATG
ACCATTGGAAGAGATGATGCCTGTAAAAATTTTAGTGGAGCAGACCTAGCAGCACTGATG
AATGAAGCTGCAATGGTTGCACTTGAAGATAAATTGACAGCCATGGCTACAGGTTGTGGT
GATGGTGACACATCATCGATTATTAAGGAGTCACATTTCAAACGCGCTTTGGAAAAAGTT
TCTCCATCTGTCTCCAATGAGCAAATACAATACTATCAGGAGTTATCAAAACACTTCAGA
GCATCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400031316
PEP Infomation

pacid=37436516 transcript=PGSC0003DMT400046254 locus=PGSC0003DMG400017956 ID=PGSC0003DMT400046254.v4.03 annot-version=v4.03
Sequence

MGRGGRGGGSGGRRSLSSAFDRELRTHIESCKNNYLSVEDLVDHLRSSYHKYSREKLQPF
TKRVQDVLQLQSSNPNSTEEVTPPKKKPKRDGSEQRLQLLEKKHIMNSQRKKQEGDGSSS
TTLASTSDSDDSHSSSSSDAIYGEKLEDKPDLMKSMLRHTYNQQVNGTPKSKKIEYEVIH
DNNDEKRKKLVMSKGGGQRRNGATKDLGGGGVEGERFGDSEGNVDGPKFKDLGGMDGVLE
ELKMEVIVPLYHPQLTKHLGVRPMSGILLHGPPGCGKTKLAHAIANETRVPFYKLSATEL
VSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIAAKRENLQREMERRIVTQLMTCMDE
SHRLVKPDDAKGTALATDKRNNEAKSDGSNGGPGYVLVIGATNRPDAIDPALRRPGRFDR
EIVLGIPDENARVQILSVLTRNLRVEGAFDLTKIASSTPGFVGADLAALTNKAGNLAMKR
IIDERKVELSRELSDGEDAEEWWRKPWSPEEMEKLSIFMADFEEAAKLIQPSSRREGFSA
IPNVKWEDVGGLDSLRHDFDRYIVRRIKNPKDYMGFGVDLETGFLLYGPPGCGKTLIAKA
VANEAGANFIHIKGPEILNKYVGESELTIRTLFTRARTCAPCILFFDEMDALTTKRGKEG
GWVVERLLNQLLIELDGADQRKGVYVIGATNRPEVMDQAILRPGRLGRLLYVPLPSPDER
VLILKALARKKPIDSSVDLMTIGRDDACKNFSGADLAALMNEAAMVALEDKLTAMATGCG
DGDTSSIIKESHFKRALEKVSPSVSNEQIQYYQELSKHFRAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400046254
Transcript Infomation

pacid=37436516 locus=PGSC0003DMG400017956 ID=PGSC0003DMT400046254.v4.03 annot-version=v4.03
Sequence

ATGGGAAGGGGAGGACGCGGCGGCGGCAGCGGTGGACGGAGGTCACTTTCCTCGGCGTTC
GATCGAGAGCTTCGCACCCACATTGAGTCCTGTAAGAACAATTATCTCTCCGTTGAAGAT
CTCGTCGACCACCTCCGTTCATCTTATCACAAGTATTCCCGCGAAAAGTTACAGCCGTTT
ACCAAACGGGTCCAAGATGTTCTGCAGCTCCAGAGCTCAAACCCTAACTCAACTGAAGAA
GTAACGCCTCCGAAAAAGAAGCCAAAAAGAGACGGCAGCGAGCAGAGATTGCAGCTCCTT
GAGAAGAAGCATATAATGAATAGTCAAAGAAAGAAGCAGGAAGGGGACGGTTCGTCGTCG
ACGACTCTCGCAAGTACTTCCGATAGTGATGATTCTCACTCTTCTTCATCTTCCGATGCT
ATTTATGGAGAGAAATTGGAAGACAAGCCTGATTTAATGAAGTCTATGCTTCGACATACG
TACAATCAACAGGTTAATGGTACTCCCAAGTCCAAAAAAATTGAATACGAGGTCATTCAT
GACAATAATGATGAAAAAAGGAAGAAACTTGTTATGTCTAAAGGAGGAGGACAACGAAGA
AACGGAGCCACTAAGGATTTAGGAGGAGGAGGAGTAGAGGGGGAAAGGTTTGGGGATAGT
GAAGGGAATGTTGATGGGCCAAAGTTTAAGGATTTAGGAGGAATGGATGGAGTGTTGGAG
GAATTGAAAATGGAGGTGATTGTTCCATTGTACCATCCTCAGCTGACTAAGCATCTTGGA
GTTAGGCCTATGTCAGGGATACTCTTACACGGGCCACCAGGCTGTGGTAAAACAAAACTA
GCTCATGCTATTGCCAATGAGACTCGAGTTCCATTCTACAAACTATCTGCTACTGAGTTG
GTCTCTGGAGTTTCAGGTGCATCAGAAGAGAACATAAGGGAACTGTTCTCAAAAGCATAC
CGGACAGCACCTTCTATTGTGTTTATTGATGAGATTGATGCAATTGCTGCCAAAAGAGAA
AATTTACAGAGAGAAATGGAGCGGCGCATTGTAACACAGCTAATGACGTGCATGGATGAG
TCACATAGACTTGTAAAACCTGATGATGCAAAGGGAACTGCTCTAGCCACTGATAAAAGA
AATAATGAAGCAAAATCAGACGGATCTAATGGTGGACCTGGTTATGTCCTAGTAATTGGG
GCGACAAATAGACCTGATGCTATTGACCCAGCATTGAGGAGGCCTGGACGATTCGACCGT
GAAATCGTCTTGGGTATTCCAGATGAAAATGCAAGGGTGCAAATTTTGTCTGTGCTTACA
CGTAACCTAAGAGTTGAAGGTGCATTTGATCTCACGAAGATAGCTAGCTCAACCCCAGGA
TTTGTCGGAGCAGACTTGGCTGCTCTAACTAACAAGGCAGGTAACTTGGCAATGAAGAGG
ATAATAGACGAGAGGAAGGTTGAGCTTTCAAGAGAATTGTCAGATGGTGAAGATGCCGAA
GAATGGTGGAGAAAGCCATGGTCACCTGAAGAGATGGAAAAGCTCAGCATTTTTATGGCT
GATTTTGAGGAAGCAGCTAAATTGATTCAACCTTCATCTAGAAGAGAAGGTTTCTCCGCT
ATCCCAAATGTTAAGTGGGAAGATGTTGGAGGCCTTGATTCGTTAAGACATGACTTTGAC
CGTTACATTGTCAGGCGTATAAAGAATCCTAAAGATTACATGGGTTTTGGAGTGGACTTG
GAAACAGGATTCTTGCTTTATGGTCCCCCGGGATGCGGTAAAACATTAATTGCCAAGGCT
GTTGCTAATGAAGCTGGAGCAAATTTTATACACATTAAGGGACCTGAAATTTTGAACAAG
TATGTTGGTGAAAGTGAGCTAACTATTCGGACATTATTTACCCGTGCAAGGACATGTGCT
CCATGCATTCTATTCTTCGATGAGATGGATGCATTGACAACTAAGCGTGGTAAAGAAGGA
GGTTGGGTCGTTGAAAGGCTTTTGAATCAGCTACTAATAGAACTAGACGGTGCTGATCAG
AGAAAAGGTGTTTATGTGATTGGTGCCACAAATAGGCCTGAAGTCATGGACCAAGCTATT
CTTCGACCTGGAAGGTTAGGGAGACTCCTATATGTCCCTCTACCTAGTCCAGATGAGCGT
GTACTAATTTTAAAAGCTCTTGCCCGGAAAAAGCCGATAGATTCTAGTGTCGACTTGATG
ACCATTGGAAGAGATGATGCCTGTAAAAATTTTAGTGGAGCAGACCTAGCAGCACTGATG
AATGAAGCTGCAATGGTTGCACTTGAAGATAAATTGACAGCCATGGCTACAGGTTGTGGT
GATGGTGACACATCATCGATTATTAAGGAGTCACATTTCAAACGCGCTTTGGAAAAAGTT
TCTCCATCTGTCTCCAATGAGCAAATACAATACTATCAGGAGTTATCAAAACACTTCAGA
GCATCATGA