Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046121
CDS Infomation

pacid=37439894 polypeptide=PGSC0003DMP400031237 locus=PGSC0003DMG402017902 ID=PGSC0003DMT400046121.v4.03 annot-version=v4.03
Sequence

ATGGAAGATAATTTTGTGCCATTTCGTGGAATTAAAAATGACCTCAAAGGGAGATTAATG
TGCTTTAAACAAGATTGGACTAGTGGTCTCACCGCAGGCTTCAGGATTTTAGCTCCCACT
ACCTATATATTTTTTGCTTCAGCAATTCCAGTAATATCATTTGGTGAGCAGTTGGAAAGA
AGTACTGATGGATTGATAACTGCAGTTCAGACTCTTGCTTCAACTGCATTATGTGGGATT
ATGCACTCTATAATTGGAGGCCAACCTCTATTAATTCTTGGAGTTGCAGAACCAACTGTG
CTTATGTACACATTCATGTACAACTTTGCAAAAGATAGACCCGAACTGGGACCAAAGCTC
TTTTTAGCTTGGACAGCATGGGTGTGTGTTTGGACTGCAATCTTGCTTTTCCTTCTGGCT
GTCCTAGGAGCTTGTTCCATTATCAATAGGTTTACACGTATTGCTGGGGAACTGTTTGGC
CTTCTAATTGCAATGCTTTTCATGCAGCAAGCAATCAAAGGACTGGTATATGAATTTCGT
GTACCCGAGAGAGAAAATCCAAATCTCCCTGAGTTCCAATCTTCATGGAGGTTTGCAAAT
GGTATGTTTGCATTGGTTTTGTCGTTTGGTCTTCTACTCACAGCTCTAAGGAGTCGAAAG
GCAAGATCTTGGCGATATGGCTCTGGCTGGCTTCGGGGTTTCATAGCAGATTACGGAGTG
CCACTCATGGTTTTAATCTGGACAGCTGTCTCTTACATTCCTGGTAAAAATGTTCCAACT
GGGATTCCAAGACGACTTTTCAGTCCAAATCCATGGTCACCTGGTGCCTATGAGAATTGG
ACAGTGATAAAGGAAATGCTAGATGTCCCAGTACTTCACATAATTGGTGCTTTTATTCCA
GCAACAATGGTAGCGGTCCTGTATTACTTTGATCACAGCGTGGCATCTCAACTTGCTCAG
CAAAAAGAGTTTAACCTTAGAAAGCCATCTTCCTACCATTATGATCTGCTGTTACTGGGA
TTTATGGTTATCATTTGTGGTCTTCTAGGAATCCCCCCGGCAAATGGAGTCATTCCACAA
TCTCCAATGCATACAAAGAGTTTGGCCACACTGAAGCATCAGTTGCTTCGTAATCGACTA
GTTGCAAAAGCACGGAAATGTATGACTGAGAATGGTAACTTGGCTGAAGTGTATGAAAGT
ATGCAAGAAGCCTATCAACAGATACAGAGTCCATTGATTCACCAAGAACCATCATCTCGG
GGGTTAAAAGAGTTGAAAGAGTCTACGATTCAATTGGCTTCAAGAATAGGCAACAGGGAT
GAACCTGTTGATGAGACAATCTTTGATGTTGAGAAGGAGATAGATGACTTGTTGCCCGTT
GAAGTGAAGGAGCAAAGGTTGAGCAACTTGCTTCAGTCCGCCATGGTGGGAGGATGTGTG
GCCGCCATGCCTCTTCTCAAAATGATTCCGACATCAGTCCTTTGGGGATACTTTGGCTTC
ATGGCCATTGAAAGCTTACCAGGAAATCAGTTCTGGGAACGGATCCTATTACTATTCACA
GCTCCAAGCCGAAGATACAAAATAATTGAAGAGTGTCATGCTGTGTTCATTGAAACTGTA
CCTTACAAGACAGTAGCGTTCTTCACCATTTTCCAGAGCATCTACTTACTAATCTGTTTT
GGGATAACATGGGTTCCCATTGCTGGCGTTCTCTTCCCACTAATGATCATGCTTTTAGTT
CCAGTCAGACAGTACCTACTACCTAGGTTCTTCAAAGGAGCACATCTTCAGGAATTAGAT
GCTGCTGAGTATGAAGAAGCACCACCGTTATCATCATGCAGCATGACTAGACAGGAAAAT
GAAGGTTCATTTGGAGATGATGGGGAGATTATGGATGGCATGATGACAAGAAGTCGAGGT
GAGATTCGACGTATGTGCAGTTCAAAGGTAACAAGCTGCAATGCGACACCAACCAGAGAT
TCTGTTAGCATCCAAAGCCCAAGGCTTTCTAACAAGGTGTACAGTCCTCGCGTTAGTGAG
ATAAAAGGGGAAAGTCCTTCTCTTGGTCGAGGAGGATCCTTCGGTTCCAGAACTGGGGAA
GCAAGACGATCAAATCTGTCAAAAACTCATAGTTTCAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031237
PEP Infomation

pacid=37439894 transcript=PGSC0003DMT400046121 locus=PGSC0003DMG402017902 ID=PGSC0003DMT400046121.v4.03 annot-version=v4.03
Sequence

MEDNFVPFRGIKNDLKGRLMCFKQDWTSGLTAGFRILAPTTYIFFASAIPVISFGEQLER
STDGLITAVQTLASTALCGIMHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDRPELGPKL
FLAWTAWVCVWTAILLFLLAVLGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVYEFR
VPERENPNLPEFQSSWRFANGMFALVLSFGLLLTALRSRKARSWRYGSGWLRGFIADYGV
PLMVLIWTAVSYIPGKNVPTGIPRRLFSPNPWSPGAYENWTVIKEMLDVPVLHIIGAFIP
ATMVAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFMVIICGLLGIPPANGVIPQ
SPMHTKSLATLKHQLLRNRLVAKARKCMTENGNLAEVYESMQEAYQQIQSPLIHQEPSSR
GLKELKESTIQLASRIGNRDEPVDETIFDVEKEIDDLLPVEVKEQRLSNLLQSAMVGGCV
AAMPLLKMIPTSVLWGYFGFMAIESLPGNQFWERILLLFTAPSRRYKIIEECHAVFIETV
PYKTVAFFTIFQSIYLLICFGITWVPIAGVLFPLMIMLLVPVRQYLLPRFFKGAHLQELD
AAEYEEAPPLSSCSMTRQENEGSFGDDGEIMDGMMTRSRGEIRRMCSSKVTSCNATPTRD
SVSIQSPRLSNKVYSPRVSEIKGESPSLGRGGSFGSRTGEARRSNLSKTHSFN*

Transcript Sequence

Transcript ID

PGSC0003DMT400046121
Transcript Infomation

pacid=37439894 locus=PGSC0003DMG402017902 ID=PGSC0003DMT400046121.v4.03 annot-version=v4.03
Sequence

ATGGAAGATAATTTTGTGCCATTTCGTGGAATTAAAAATGACCTCAAAGGGAGATTAATG
TGCTTTAAACAAGATTGGACTAGTGGTCTCACCGCAGGCTTCAGGATTTTAGCTCCCACT
ACCTATATATTTTTTGCTTCAGCAATTCCAGTAATATCATTTGGTGAGCAGTTGGAAAGA
AGTACTGATGGATTGATAACTGCAGTTCAGACTCTTGCTTCAACTGCATTATGTGGGATT
ATGCACTCTATAATTGGAGGCCAACCTCTATTAATTCTTGGAGTTGCAGAACCAACTGTG
CTTATGTACACATTCATGTACAACTTTGCAAAAGATAGACCCGAACTGGGACCAAAGCTC
TTTTTAGCTTGGACAGCATGGGTGTGTGTTTGGACTGCAATCTTGCTTTTCCTTCTGGCT
GTCCTAGGAGCTTGTTCCATTATCAATAGGTTTACACGTATTGCTGGGGAACTGTTTGGC
CTTCTAATTGCAATGCTTTTCATGCAGCAAGCAATCAAAGGACTGGTATATGAATTTCGT
GTACCCGAGAGAGAAAATCCAAATCTCCCTGAGTTCCAATCTTCATGGAGGTTTGCAAAT
GGTATGTTTGCATTGGTTTTGTCGTTTGGTCTTCTACTCACAGCTCTAAGGAGTCGAAAG
GCAAGATCTTGGCGATATGGCTCTGGCTGGCTTCGGGGTTTCATAGCAGATTACGGAGTG
CCACTCATGGTTTTAATCTGGACAGCTGTCTCTTACATTCCTGGTAAAAATGTTCCAACT
GGGATTCCAAGACGACTTTTCAGTCCAAATCCATGGTCACCTGGTGCCTATGAGAATTGG
ACAGTGATAAAGGAAATGCTAGATGTCCCAGTACTTCACATAATTGGTGCTTTTATTCCA
GCAACAATGGTAGCGGTCCTGTATTACTTTGATCACAGCGTGGCATCTCAACTTGCTCAG
CAAAAAGAGTTTAACCTTAGAAAGCCATCTTCCTACCATTATGATCTGCTGTTACTGGGA
TTTATGGTTATCATTTGTGGTCTTCTAGGAATCCCCCCGGCAAATGGAGTCATTCCACAA
TCTCCAATGCATACAAAGAGTTTGGCCACACTGAAGCATCAGTTGCTTCGTAATCGACTA
GTTGCAAAAGCACGGAAATGTATGACTGAGAATGGTAACTTGGCTGAAGTGTATGAAAGT
ATGCAAGAAGCCTATCAACAGATACAGAGTCCATTGATTCACCAAGAACCATCATCTCGG
GGGTTAAAAGAGTTGAAAGAGTCTACGATTCAATTGGCTTCAAGAATAGGCAACAGGGAT
GAACCTGTTGATGAGACAATCTTTGATGTTGAGAAGGAGATAGATGACTTGTTGCCCGTT
GAAGTGAAGGAGCAAAGGTTGAGCAACTTGCTTCAGTCCGCCATGGTGGGAGGATGTGTG
GCCGCCATGCCTCTTCTCAAAATGATTCCGACATCAGTCCTTTGGGGATACTTTGGCTTC
ATGGCCATTGAAAGCTTACCAGGAAATCAGTTCTGGGAACGGATCCTATTACTATTCACA
GCTCCAAGCCGAAGATACAAAATAATTGAAGAGTGTCATGCTGTGTTCATTGAAACTGTA
CCTTACAAGACAGTAGCGTTCTTCACCATTTTCCAGAGCATCTACTTACTAATCTGTTTT
GGGATAACATGGGTTCCCATTGCTGGCGTTCTCTTCCCACTAATGATCATGCTTTTAGTT
CCAGTCAGACAGTACCTACTACCTAGGTTCTTCAAAGGAGCACATCTTCAGGAATTAGAT
GCTGCTGAGTATGAAGAAGCACCACCGTTATCATCATGCAGCATGACTAGACAGGAAAAT
GAAGGTTCATTTGGAGATGATGGGGAGATTATGGATGGCATGATGACAAGAAGTCGAGGT
GAGATTCGACGTATGTGCAGTTCAAAGGTAACAAGCTGCAATGCGACACCAACCAGAGAT
TCTGTTAGCATCCAAAGCCCAAGGCTTTCTAACAAGGTGTACAGTCCTCGCGTTAGTGAG
ATAAAAGGGGAAAGTCCTTCTCTTGGTCGAGGAGGATCCTTCGGTTCCAGAACTGGGGAA
GCAAGACGATCAAATCTGTCAAAAACTCATAGTTTCAACTAA