Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046035
CDS Infomation

pacid=37428126 polypeptide=PGSC0003DMP400031190 locus=PGSC0003DMG400017862 ID=PGSC0003DMT400046035.v4.03 annot-version=v4.03
Sequence

ATGGAAGAACTGAATTTACCATTTTCAGGTGGGACTTTTGCTCTTTATTCATTACTCTGT
CGACAAGCTAAGATAAATACAATTCCAAACCAACACCGAACTGATGAGGAGCTGACAACT
TATAGCCGTAGCACATTCCATGAGCATTCATTTGCTGCGAAAACAAAAAGATGGTTGGAG
GCATATCCATATAGGAAGAACGCACTTCTTATTCTTGTAGTTGTTGGCACCTGCATGGTA
ATTGGTGATGGAATTCTCACTCCTGCCATATCAGTTCTTTCGGCTTCTGGTGGGATCAAG
GTGGACCATCCGAAGATGAGTAATGATGTAGTAGTGGTTGTTGCTGTCATTATATTAGTT
GGTTTGTTTAGCTTACAGCATTATGGCACAGACAGAGTGGGTTGGCTGTTTGCCCCAATT
GTGCTGCTTTGGTTTCTTTTAGTAGGGGGTATTGGTATCTATAACATCTGGAAATACGAT
AGCTCTGTTTTACGGGCTTTTTCTCCTGTCTACATATATCGGTATTTTAAAAGGGGAAAA
AGAGATGGTTGGACATCACTGGGAGGGATCATGCTCAGCATTACAGGAACAGAAGCACTT
TTTGCTGATCTTGCTCATTTTCCAGTGTCAGCAATACAGCTTGCTTTCACGGTCATTGTT
TTCCCTTGCCTTCTTTTGGCTTATTCTGGACAAGCAGCTTACCTCATGCAAAATACGGAT
CACGTTGCTGATGCATTCTATCGATCTATTCCAGAAAGCATATACTGGCCAGTTTTTGTC
ATTGCAACTTTAGCTGCTATTGTTGCCAGTCAGGCTACCATATCTGCAACTTTTTCAATA
ATCAAGCAAGCTCTAGCACTTGGCTGTTTCCCAAGAGTAAAGGTTGTGCATACATCAAAG
AAGTTCTTGGGGCAGATATATATTCCTGATATTAATTGGATTCTTATGGTTCTTTGCATT
GCCGTTACTGCTGGATTTAAAAATCAAAGCCAAATAGGCAATGCTTATGGAACAGCAGTG
GTGATAGTCATGCTGGTGACGACATTGCTCATGACTTTGATAATGTTACTAGTATGGCAC
TGCCATTGGGTTGTTGTCCTTATCTTCACTGTCTTATCTCTGGTGGTTGAATGTACCTAC
TTCTCAGCAGTACTTTTTAAGCTTGACCAGGGTGGTTGGGTTCCCCTCGTGATTGCTGCA
GCTTTTCTTGTCATCATGTATGTATGGCATTATGGAACAGTGAAACGCTATGAATTTGAG
ATGCACAGCAAAGTATCTATGGCATGGATTCTTGGGCTTGGCCCCAGTTTAGGATTGGTA
CGTGTGCCAGGAATTGGACTCGTGTACACCGAGCTAGCTAGTGGAGTGCCTCACATCTTT
TCTCACTTCATTACCAACCTACCTGCTATACACTCAGTTGTGGTATTTGTGTGCGTAAAG
TACCTTCCTGTTTATACAGTTCCAGAAGATGAAAGATTCCTTGTGAAACGGATAGGACCG
AAGAATTATCACATGTTCCGCTGTGTTGCTAGGTATGGTTACAAAGACCTCCATAAGAAG
GATGATGACTTTGAGAAAAAGCTTTTCGATAATCTCTTTATGTTTGTCCGGCTGGATTCG
ATGATGGATGGCTGCTCTGACTCTGATGAATACAGCTTATATGGACAGCAAACCCAACAT
TCAAGAGATTATAATGGAAACTCATCTACTGCAAATATTGAACTCAGTTATTCATCAATG
GACTCGATAGCCCCTGCCAAATGTCATCCTCAGGGAAACAGCACAATCACATCATCAGGC
CACGAGAGCAGCCAGACCGAAGTAGATGAATTGGAATTCTTAAACAGTTGTAGAGATGCT
GGGGTTGTACACATACTTGGGAACACTGTAATTAGAGCAAGAAGGGAATCCAGGTTTTAT
AAGAAACTTGCTATAGACTATATATATGCATTCCTTAGGAAAATATGCAGGGAAAATAGT
GTCATTTTCAATGTACCGCATGAGAGCCTCTTGAATGTTGGACAGATCTTTTATGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400031190
PEP Infomation

pacid=37428126 transcript=PGSC0003DMT400046035 locus=PGSC0003DMG400017862 ID=PGSC0003DMT400046035.v4.03 annot-version=v4.03
Sequence

MEELNLPFSGGTFALYSLLCRQAKINTIPNQHRTDEELTTYSRSTFHEHSFAAKTKRWLE
AYPYRKNALLILVVVGTCMVIGDGILTPAISVLSASGGIKVDHPKMSNDVVVVVAVIILV
GLFSLQHYGTDRVGWLFAPIVLLWFLLVGGIGIYNIWKYDSSVLRAFSPVYIYRYFKRGK
RDGWTSLGGIMLSITGTEALFADLAHFPVSAIQLAFTVIVFPCLLLAYSGQAAYLMQNTD
HVADAFYRSIPESIYWPVFVIATLAAIVASQATISATFSIIKQALALGCFPRVKVVHTSK
KFLGQIYIPDINWILMVLCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTLLMTLIMLLVWH
CHWVVVLIFTVLSLVVECTYFSAVLFKLDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFE
MHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVK
YLPVYTVPEDERFLVKRIGPKNYHMFRCVARYGYKDLHKKDDDFEKKLFDNLFMFVRLDS
MMDGCSDSDEYSLYGQQTQHSRDYNGNSSTANIELSYSSMDSIAPAKCHPQGNSTITSSG
HESSQTEVDELEFLNSCRDAGVVHILGNTVIRARRESRFYKKLAIDYIYAFLRKICRENS
VIFNVPHESLLNVGQIFYV*

Transcript Sequence

Transcript ID

PGSC0003DMT400046035
Transcript Infomation

pacid=37428126 locus=PGSC0003DMG400017862 ID=PGSC0003DMT400046035.v4.03 annot-version=v4.03
Sequence

ATGGAAGAACTGAATTTACCATTTTCAGGTGGGACTTTTGCTCTTTATTCATTACTCTGT
CGACAAGCTAAGATAAATACAATTCCAAACCAACACCGAACTGATGAGGAGCTGACAACT
TATAGCCGTAGCACATTCCATGAGCATTCATTTGCTGCGAAAACAAAAAGATGGTTGGAG
GCATATCCATATAGGAAGAACGCACTTCTTATTCTTGTAGTTGTTGGCACCTGCATGGTA
ATTGGTGATGGAATTCTCACTCCTGCCATATCAGTTCTTTCGGCTTCTGGTGGGATCAAG
GTGGACCATCCGAAGATGAGTAATGATGTAGTAGTGGTTGTTGCTGTCATTATATTAGTT
GGTTTGTTTAGCTTACAGCATTATGGCACAGACAGAGTGGGTTGGCTGTTTGCCCCAATT
GTGCTGCTTTGGTTTCTTTTAGTAGGGGGTATTGGTATCTATAACATCTGGAAATACGAT
AGCTCTGTTTTACGGGCTTTTTCTCCTGTCTACATATATCGGTATTTTAAAAGGGGAAAA
AGAGATGGTTGGACATCACTGGGAGGGATCATGCTCAGCATTACAGGAACAGAAGCACTT
TTTGCTGATCTTGCTCATTTTCCAGTGTCAGCAATACAGCTTGCTTTCACGGTCATTGTT
TTCCCTTGCCTTCTTTTGGCTTATTCTGGACAAGCAGCTTACCTCATGCAAAATACGGAT
CACGTTGCTGATGCATTCTATCGATCTATTCCAGAAAGCATATACTGGCCAGTTTTTGTC
ATTGCAACTTTAGCTGCTATTGTTGCCAGTCAGGCTACCATATCTGCAACTTTTTCAATA
ATCAAGCAAGCTCTAGCACTTGGCTGTTTCCCAAGAGTAAAGGTTGTGCATACATCAAAG
AAGTTCTTGGGGCAGATATATATTCCTGATATTAATTGGATTCTTATGGTTCTTTGCATT
GCCGTTACTGCTGGATTTAAAAATCAAAGCCAAATAGGCAATGCTTATGGAACAGCAGTG
GTGATAGTCATGCTGGTGACGACATTGCTCATGACTTTGATAATGTTACTAGTATGGCAC
TGCCATTGGGTTGTTGTCCTTATCTTCACTGTCTTATCTCTGGTGGTTGAATGTACCTAC
TTCTCAGCAGTACTTTTTAAGCTTGACCAGGGTGGTTGGGTTCCCCTCGTGATTGCTGCA
GCTTTTCTTGTCATCATGTATGTATGGCATTATGGAACAGTGAAACGCTATGAATTTGAG
ATGCACAGCAAAGTATCTATGGCATGGATTCTTGGGCTTGGCCCCAGTTTAGGATTGGTA
CGTGTGCCAGGAATTGGACTCGTGTACACCGAGCTAGCTAGTGGAGTGCCTCACATCTTT
TCTCACTTCATTACCAACCTACCTGCTATACACTCAGTTGTGGTATTTGTGTGCGTAAAG
TACCTTCCTGTTTATACAGTTCCAGAAGATGAAAGATTCCTTGTGAAACGGATAGGACCG
AAGAATTATCACATGTTCCGCTGTGTTGCTAGGTATGGTTACAAAGACCTCCATAAGAAG
GATGATGACTTTGAGAAAAAGCTTTTCGATAATCTCTTTATGTTTGTCCGGCTGGATTCG
ATGATGGATGGCTGCTCTGACTCTGATGAATACAGCTTATATGGACAGCAAACCCAACAT
TCAAGAGATTATAATGGAAACTCATCTACTGCAAATATTGAACTCAGTTATTCATCAATG
GACTCGATAGCCCCTGCCAAATGTCATCCTCAGGGAAACAGCACAATCACATCATCAGGC
CACGAGAGCAGCCAGACCGAAGTAGATGAATTGGAATTCTTAAACAGTTGTAGAGATGCT
GGGGTTGTACACATACTTGGGAACACTGTAATTAGAGCAAGAAGGGAATCCAGGTTTTAT
AAGAAACTTGCTATAGACTATATATATGCATTCCTTAGGAAAATATGCAGGGAAAATAGT
GTCATTTTCAATGTACCGCATGAGAGCCTCTTGAATGTTGGACAGATCTTTTATGTGTAA