Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046026
CDS Infomation

pacid=37461844 polypeptide=PGSC0003DMP400031183 locus=PGSC0003DMG400017857 ID=PGSC0003DMT400046026.v4.03 annot-version=v4.03
Sequence

ATGGGCAATGAACAGCCTTCCAACCCCCAAGATGACTATAAAGCAAAAGAAACGAAACCT
CAACTTGGGGAACGGTGGCCACATGGAGGATTTCGAGGTGGAGGTGGATGGATTAGCAGT
GACAGAGTCACAAGCACTTATGATCTTGTTGAACAGATGCATTTTCTTTATGTTCGAGTT
GTGAAAGCAAGAGACCTACCACCAAACCCTGTAACAGGGAGTTGTGATCCTTATGTGGAG
GTGAAACTCGGAAACTATAAAGGCAAAACAAAGCACTTTGATAAGAAGGTAAACCCTGAG
TGGAAGCAAGTGTTTGCTTTTTCCAAAGAGAAGATTCAGTCTTCAATTATCGAAGTTTTT
GTAAGAGACAAAGAGATGGTGCAGAGAGATGATTATCTAGGGAAAGTGGTGTTTGACATG
AATGAAGTGCCTACAAGGGTTCCACCTGACAGCCCTTTGGCACCTCAGTGGTATAGATTA
GAGGATCGACGTGGAGAGAGCAAAGTCAGGGGAGAGGTGATGCTTGCAGTGTGGATGGGA
ACCCAAGCAGACGAAGCCTTTTCAGAAGCATGGCATGCAGATGCTGCTTTAGTTCATGGA
GAAGGTGTTCATAGTGTCAGATCAAAGGTATATGTTTCACCTAAACTGTGGTACCTGAGA
GTCAATATCATTGAATCCCAAGATGTAGAATCCCTGGACAAAAGCCAACCCCCACAGGTA
TTTGTTAAGGCTCAAGTTGGGAAGCAAGTACTAAAGACCAAAGTATGCCAAACACGAACA
ACTAATCCATTCTGGAATGAAGACCTATTATTTGTGGCGGCAGAGCCTTTTGAGGAGCAG
TTGGTGCTTACCGTTGAATGCAAAGCCGGACCTTCCAAAGATGAGATCGCCGGGAGGTTA
GTCTTGCCACTTAACACATTTGAGAAGCGATTGGATCACCGGCCAGTTCATTCTCGCTGG
TTCAATCTTGAAAGGTTCGGGTTTGGAGTTTTAGAGGGAGATAGGAGACATGAACGCAAG
TTTTCAACAAGAATCCATCTCAGGGCCTGTCTTGAAGGTGGATACCACGTATTAGATGAA
TCAACAATGTACATCAGCGATCAGAGGCCAACAGCTAGGCAGTTGTGGAAGCAACCAGTG
GGAATCCTGGAAGTAGGCATCTTGAGTGCACAGGGGCTTGTCCCTATAAAACCAAAGGAT
GGTAGAAAGACGACAGATGCTTACTGTGTGGCTAAATATGGATTGAAGTGGGTAAGAACA
AGAACCATACTTGACAACTTGAGTCCCAAATGGAACGAACAATACACGTGGGAGGTGTAT
GACCCATGCACGGTGATTACATTGGGTGTGTTTGATAACGGCCACCTAGGAGAGAACTCG
GGTGCAGCAGGGAAGGACTCCAGAATTGGTAAGGTAAGGATCAGATTATCAACACTGGAA
ACTGATAGAATTTATACAATGTCTTACCCACTTCTTGTTCTGCAACCATCTGGAGTGAAG
AAGATGGGTGAACTCCAACTGGCATTTAGATTTACTTGTTTGTCTCTTGCAAACATCATA
TATCTATATGGCCATCCTTTGCTCCCAAAGATGCATTATCTACACCCTTTCACAGTTAAC
CAAGTGGACAGTTTGAGATATCAGGCCATGAATATTGTAGCTGTGAGGCTTGGACGAGCC
GAGCCACCACTGCATAAAGAGGTTGTGGAGTACATGCTGGATGTCGACTCCCACATGTGG
AGCATGAGAAGAAGTAAAGCTAACTTCTTCAGAATTGTTTCTCTCTTTTCAGGTGTAATT
TCAATGAGCAAATGGCTTGGAGAAGTTTGCAAATGGAAGAACCCTATTACCACAATTCTA
GTTCATCTTCTGTTTTGCATATTGATCTGCTACCCAGAGTTAATACTACCAACCATGTTC
CTTTATATGTTTCTAATTGGAATATGGAACTACCGTTCGAGACCGAGGCAGCCTCAACAT
ATGGACACAAAACTATCTTGGGCTGAAGCTGTTATCTCAGATGAACTAGATGAAGAGTTT
GACACTTTCCCAACATCCAAGCCTGAGAATACAGTTAAAATGAGGTATGATAGACTTCGC
AGTGTGGCTGGTAGAATTCAAACAGTTATAGGAGACATGGCAACTCAAGGAGAGAGATTC
CAGGCTCTACTCAGTTGGAGAGATCCGAGGGCAACCAGCCTCTTCATAGTCTTCTGTCTT
ATTGCAGCAGTTATACTGTATGTGACACCTTTCAAAATCATAGCACTGGTAGCAGCTCTG
CTTTACCTAAGGCACCCAAAATTCAGGAGCAAAATGCCTTCACCACCATGCAATTTCTTT
CGCAGATTACCAGCTCGAGCTGATAGCATGCTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400031183
PEP Infomation

pacid=37461844 transcript=PGSC0003DMT400046026 locus=PGSC0003DMG400017857 ID=PGSC0003DMT400046026.v4.03 annot-version=v4.03
Sequence

MGNEQPSNPQDDYKAKETKPQLGERWPHGGFRGGGGWISSDRVTSTYDLVEQMHFLYVRV
VKARDLPPNPVTGSCDPYVEVKLGNYKGKTKHFDKKVNPEWKQVFAFSKEKIQSSIIEVF
VRDKEMVQRDDYLGKVVFDMNEVPTRVPPDSPLAPQWYRLEDRRGESKVRGEVMLAVWMG
TQADEAFSEAWHADAALVHGEGVHSVRSKVYVSPKLWYLRVNIIESQDVESLDKSQPPQV
FVKAQVGKQVLKTKVCQTRTTNPFWNEDLLFVAAEPFEEQLVLTVECKAGPSKDEIAGRL
VLPLNTFEKRLDHRPVHSRWFNLERFGFGVLEGDRRHERKFSTRIHLRACLEGGYHVLDE
STMYISDQRPTARQLWKQPVGILEVGILSAQGLVPIKPKDGRKTTDAYCVAKYGLKWVRT
RTILDNLSPKWNEQYTWEVYDPCTVITLGVFDNGHLGENSGAAGKDSRIGKVRIRLSTLE
TDRIYTMSYPLLVLQPSGVKKMGELQLAFRFTCLSLANIIYLYGHPLLPKMHYLHPFTVN
QVDSLRYQAMNIVAVRLGRAEPPLHKEVVEYMLDVDSHMWSMRRSKANFFRIVSLFSGVI
SMSKWLGEVCKWKNPITTILVHLLFCILICYPELILPTMFLYMFLIGIWNYRSRPRQPQH
MDTKLSWAEAVISDELDEEFDTFPTSKPENTVKMRYDRLRSVAGRIQTVIGDMATQGERF
QALLSWRDPRATSLFIVFCLIAAVILYVTPFKIIALVAALLYLRHPKFRSKMPSPPCNFF
RRLPARADSML*

Transcript Sequence

Transcript ID

PGSC0003DMT400046026
Transcript Infomation

pacid=37461844 locus=PGSC0003DMG400017857 ID=PGSC0003DMT400046026.v4.03 annot-version=v4.03
Sequence

ATGGGCAATGAACAGCCTTCCAACCCCCAAGATGACTATAAAGCAAAAGAAACGAAACCT
CAACTTGGGGAACGGTGGCCACATGGAGGATTTCGAGGTGGAGGTGGATGGATTAGCAGT
GACAGAGTCACAAGCACTTATGATCTTGTTGAACAGATGCATTTTCTTTATGTTCGAGTT
GTGAAAGCAAGAGACCTACCACCAAACCCTGTAACAGGGAGTTGTGATCCTTATGTGGAG
GTGAAACTCGGAAACTATAAAGGCAAAACAAAGCACTTTGATAAGAAGGTAAACCCTGAG
TGGAAGCAAGTGTTTGCTTTTTCCAAAGAGAAGATTCAGTCTTCAATTATCGAAGTTTTT
GTAAGAGACAAAGAGATGGTGCAGAGAGATGATTATCTAGGGAAAGTGGTGTTTGACATG
AATGAAGTGCCTACAAGGGTTCCACCTGACAGCCCTTTGGCACCTCAGTGGTATAGATTA
GAGGATCGACGTGGAGAGAGCAAAGTCAGGGGAGAGGTGATGCTTGCAGTGTGGATGGGA
ACCCAAGCAGACGAAGCCTTTTCAGAAGCATGGCATGCAGATGCTGCTTTAGTTCATGGA
GAAGGTGTTCATAGTGTCAGATCAAAGGTATATGTTTCACCTAAACTGTGGTACCTGAGA
GTCAATATCATTGAATCCCAAGATGTAGAATCCCTGGACAAAAGCCAACCCCCACAGGTA
TTTGTTAAGGCTCAAGTTGGGAAGCAAGTACTAAAGACCAAAGTATGCCAAACACGAACA
ACTAATCCATTCTGGAATGAAGACCTATTATTTGTGGCGGCAGAGCCTTTTGAGGAGCAG
TTGGTGCTTACCGTTGAATGCAAAGCCGGACCTTCCAAAGATGAGATCGCCGGGAGGTTA
GTCTTGCCACTTAACACATTTGAGAAGCGATTGGATCACCGGCCAGTTCATTCTCGCTGG
TTCAATCTTGAAAGGTTCGGGTTTGGAGTTTTAGAGGGAGATAGGAGACATGAACGCAAG
TTTTCAACAAGAATCCATCTCAGGGCCTGTCTTGAAGGTGGATACCACGTATTAGATGAA
TCAACAATGTACATCAGCGATCAGAGGCCAACAGCTAGGCAGTTGTGGAAGCAACCAGTG
GGAATCCTGGAAGTAGGCATCTTGAGTGCACAGGGGCTTGTCCCTATAAAACCAAAGGAT
GGTAGAAAGACGACAGATGCTTACTGTGTGGCTAAATATGGATTGAAGTGGGTAAGAACA
AGAACCATACTTGACAACTTGAGTCCCAAATGGAACGAACAATACACGTGGGAGGTGTAT
GACCCATGCACGGTGATTACATTGGGTGTGTTTGATAACGGCCACCTAGGAGAGAACTCG
GGTGCAGCAGGGAAGGACTCCAGAATTGGTAAGGTAAGGATCAGATTATCAACACTGGAA
ACTGATAGAATTTATACAATGTCTTACCCACTTCTTGTTCTGCAACCATCTGGAGTGAAG
AAGATGGGTGAACTCCAACTGGCATTTAGATTTACTTGTTTGTCTCTTGCAAACATCATA
TATCTATATGGCCATCCTTTGCTCCCAAAGATGCATTATCTACACCCTTTCACAGTTAAC
CAAGTGGACAGTTTGAGATATCAGGCCATGAATATTGTAGCTGTGAGGCTTGGACGAGCC
GAGCCACCACTGCATAAAGAGGTTGTGGAGTACATGCTGGATGTCGACTCCCACATGTGG
AGCATGAGAAGAAGTAAAGCTAACTTCTTCAGAATTGTTTCTCTCTTTTCAGGTGTAATT
TCAATGAGCAAATGGCTTGGAGAAGTTTGCAAATGGAAGAACCCTATTACCACAATTCTA
GTTCATCTTCTGTTTTGCATATTGATCTGCTACCCAGAGTTAATACTACCAACCATGTTC
CTTTATATGTTTCTAATTGGAATATGGAACTACCGTTCGAGACCGAGGCAGCCTCAACAT
ATGGACACAAAACTATCTTGGGCTGAAGCTGTTATCTCAGATGAACTAGATGAAGAGTTT
GACACTTTCCCAACATCCAAGCCTGAGAATACAGTTAAAATGAGGTATGATAGACTTCGC
AGTGTGGCTGGTAGAATTCAAACAGTTATAGGAGACATGGCAACTCAAGGAGAGAGATTC
CAGGCTCTACTCAGTTGGAGAGATCCGAGGGCAACCAGCCTCTTCATAGTCTTCTGTCTT
ATTGCAGCAGTTATACTGTATGTGACACCTTTCAAAATCATAGCACTGGTAGCAGCTCTG
CTTTACCTAAGGCACCCAAAATTCAGGAGCAAAATGCCTTCACCACCATGCAATTTCTTT
CGCAGATTACCAGCTCGAGCTGATAGCATGCTCTGA