Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400046003
CDS Infomation

pacid=37469068 polypeptide=PGSC0003DMP400031169 locus=PGSC0003DMG400017847 ID=PGSC0003DMT400046003.v4.03 annot-version=v4.03
Sequence

ATGTCCAGTTCAAGAGGAGGAGGCCGCAGAGGAGGAGGAGCAAAATCAGCTCATTATTCT
CGTCGCAACTCCAATCAAAATTGGGTAATCAAATCTCCAATTGAACAACAAGGGTCACAA
TTATCATCTTCCTCTTTGAATTCAGGTGAAAAAGATGAAGCTTTGTCTGTAATAGCAACT
GTACAAGAACCCATCTCGGAGTTTGTTCGAGAAGATCGAAAACCCCATCGAAATCCAATT
TACCCAGAAGGGTCACAACTATCCTCCTCATCCTCTTTGATTTCAGGGGAAAATGTAGAG
GTTTCGTCTGTAAGGGAAAAAGTACAAGAACCTATATCAGAGTTTAATCAAAAAGATCTA
AAACCCGATCAGAATCGTAGGAATTCCAAAAGGGTACCCCGGAATAGTCGTATTAATGGT
AACTTCGAGAAGAAATCAGAAGATGAAGAAAGTTCTAGAGAGGTGGTGGATGTTTTGAGT
TCTTGTGTAATGGAAGAAAAGTTAAGTTGTGACAAGGAGGGAAAGAATGGTGCTGGTGTA
GAAAAAGTAGAGGGGTCTGGTGTTGATGATGTTTGGAGAAGGCTGGAGGAGCTGCAATTG
GGTGCTGAAGAGCCGGAATTATCAACTGAACAGCTTAGAATCAATGATCAAGCACAAGAG
GATGAGTTACTAGCTCTGGAATCAATTTTCGGTGACAATGTCTTTGTTCTTGATAGACGA
AATGGTCTACGATCCTTTCAGATTCATGTACATATTGAGGTTCCTGATGAGCTGACGGTG
TCTGTAAATCTAAATTCCTCTGGTGCTCTTGGAATACCAGATGATAGTTCGCCTGAGTTC
TCATACTCCCTCAAAGTTGAGCATCTACCACCAATTGTTTTGACGTGTTTATTACCTAAA
TCATATCCGAGCCACCTTGCTCCTCTCTTTACAATCTCTGTCCAGTGGTTGAATTCAACA
AACATTTCCTCTTTTTGCTCCATGCTTGATTCAATATGGAAGGAACAATTAGGTCAAGAG
GTTTTATACCAGTGGGTGGAGTGGTTGCATGCCTCTTCTCTTTCTCATTTGCAGTTTGAT
CAAGAAATAAAGTTAGGTTTTTGTGCTGAGCGTCATATCGGAGATAGGCGTGCAATTTCA
GGAACTGTCTCACCAGAGGTTGATATCCCCTCACTCAAGAGCTATGACGAGGAACAGCGC
CATGAGAATTTCCGTAGAAACATTCATCAATGCTGCATCTGTTTCAGTGAATTTCCTGGT
ATGGAGTTTGTGAGGTTGCCATGTCAGCACTTTTTTTGCTGGAATTGCATGAAAACTTAT
TCCGACATGCATGTCAAGGAAGGTACAATCACCAAGCTTTTGTGCCCCGAGGCAAAATGT
GGAGGTATGATTCCTCCAGGTTTGCTAAAGCGGTTACTTGGTGAAGTGGAGTTTGAGCGC
TGGGAATCATTGATGTTACAGAAAACATTAGAATCAATGAAGGATGTCTGCTACTGCCCA
AGATGTGAAACAGTATGCATCGAGGATGAAGATCAGCATGCCCAATGTGCAAAATGCTTC
TTTAGTTTTTGTACACTGTGCAAGGAGAAGCGTCATGTTGGAGTTATATGCATGACACCA
GAAATGAAGCTTCTTATTTTGCAGGAGCGACAGAGTTCATCTCAATTGAAAGATAGCCAA
AGACAGCGTGAGAAAGAAATGATTAATGACATTCTCAGCATGCGGGAAATTCATCGTTCT
GCGAAGCAATGCCCTTCCTGTAAGATGGCTATCTCGCGAACTGAGGGCTGCAATAAAATG
GTGTGTGATAACTGTGGAGCATACTTTTGCTATCGCTGTAATCAGGCGATTGATGGATAT
GAGCACTTCAGGGATGGGAAATGTGAGCTTTTTCCACCAGAAGCAATTCAGATGTGGGAA
GAGAGGATTAATGCTCGCCAAGTTATCGGTCAGATTCAAGCTCAAATGCTTCCTAATCGT
GCTCATCCATGCCCTAATTGTCGCCAAATGAACGTAAAGGTTGGTAATAACAATCACATA
TTCTGCTGGGCATGTCAGAATCATTACTGTTACCTTTGTGGAAAGACGGTGAAGCGAAGC
TCCCAGCATTATGGACCTAAGGGCTGCAAACAACACACTGTTGATGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400031169
PEP Infomation

pacid=37469068 transcript=PGSC0003DMT400046003 locus=PGSC0003DMG400017847 ID=PGSC0003DMT400046003.v4.03 annot-version=v4.03
Sequence

MSSSRGGGRRGGGAKSAHYSRRNSNQNWVIKSPIEQQGSQLSSSSLNSGEKDEALSVIAT
VQEPISEFVREDRKPHRNPIYPEGSQLSSSSSLISGENVEVSSVREKVQEPISEFNQKDL
KPDQNRRNSKRVPRNSRINGNFEKKSEDEESSREVVDVLSSCVMEEKLSCDKEGKNGAGV
EKVEGSGVDDVWRRLEELQLGAEEPELSTEQLRINDQAQEDELLALESIFGDNVFVLDRR
NGLRSFQIHVHIEVPDELTVSVNLNSSGALGIPDDSSPEFSYSLKVEHLPPIVLTCLLPK
SYPSHLAPLFTISVQWLNSTNISSFCSMLDSIWKEQLGQEVLYQWVEWLHASSLSHLQFD
QEIKLGFCAERHIGDRRAISGTVSPEVDIPSLKSYDEEQRHENFRRNIHQCCICFSEFPG
MEFVRLPCQHFFCWNCMKTYSDMHVKEGTITKLLCPEAKCGGMIPPGLLKRLLGEVEFER
WESLMLQKTLESMKDVCYCPRCETVCIEDEDQHAQCAKCFFSFCTLCKEKRHVGVICMTP
EMKLLILQERQSSSQLKDSQRQREKEMINDILSMREIHRSAKQCPSCKMAISRTEGCNKM
VCDNCGAYFCYRCNQAIDGYEHFRDGKCELFPPEAIQMWEERINARQVIGQIQAQMLPNR
AHPCPNCRQMNVKVGNNNHIFCWACQNHYCYLCGKTVKRSSQHYGPKGCKQHTVDE*

Transcript Sequence

Transcript ID

PGSC0003DMT400046003
Transcript Infomation

pacid=37469068 locus=PGSC0003DMG400017847 ID=PGSC0003DMT400046003.v4.03 annot-version=v4.03
Sequence

ATGTCCAGTTCAAGAGGAGGAGGCCGCAGAGGAGGAGGAGCAAAATCAGCTCATTATTCT
CGTCGCAACTCCAATCAAAATTGGGTAATCAAATCTCCAATTGAACAACAAGGGTCACAA
TTATCATCTTCCTCTTTGAATTCAGGTGAAAAAGATGAAGCTTTGTCTGTAATAGCAACT
GTACAAGAACCCATCTCGGAGTTTGTTCGAGAAGATCGAAAACCCCATCGAAATCCAATT
TACCCAGAAGGGTCACAACTATCCTCCTCATCCTCTTTGATTTCAGGGGAAAATGTAGAG
GTTTCGTCTGTAAGGGAAAAAGTACAAGAACCTATATCAGAGTTTAATCAAAAAGATCTA
AAACCCGATCAGAATCGTAGGAATTCCAAAAGGGTACCCCGGAATAGTCGTATTAATGGT
AACTTCGAGAAGAAATCAGAAGATGAAGAAAGTTCTAGAGAGGTGGTGGATGTTTTGAGT
TCTTGTGTAATGGAAGAAAAGTTAAGTTGTGACAAGGAGGGAAAGAATGGTGCTGGTGTA
GAAAAAGTAGAGGGGTCTGGTGTTGATGATGTTTGGAGAAGGCTGGAGGAGCTGCAATTG
GGTGCTGAAGAGCCGGAATTATCAACTGAACAGCTTAGAATCAATGATCAAGCACAAGAG
GATGAGTTACTAGCTCTGGAATCAATTTTCGGTGACAATGTCTTTGTTCTTGATAGACGA
AATGGTCTACGATCCTTTCAGATTCATGTACATATTGAGGTTCCTGATGAGCTGACGGTG
TCTGTAAATCTAAATTCCTCTGGTGCTCTTGGAATACCAGATGATAGTTCGCCTGAGTTC
TCATACTCCCTCAAAGTTGAGCATCTACCACCAATTGTTTTGACGTGTTTATTACCTAAA
TCATATCCGAGCCACCTTGCTCCTCTCTTTACAATCTCTGTCCAGTGGTTGAATTCAACA
AACATTTCCTCTTTTTGCTCCATGCTTGATTCAATATGGAAGGAACAATTAGGTCAAGAG
GTTTTATACCAGTGGGTGGAGTGGTTGCATGCCTCTTCTCTTTCTCATTTGCAGTTTGAT
CAAGAAATAAAGTTAGGTTTTTGTGCTGAGCGTCATATCGGAGATAGGCGTGCAATTTCA
GGAACTGTCTCACCAGAGGTTGATATCCCCTCACTCAAGAGCTATGACGAGGAACAGCGC
CATGAGAATTTCCGTAGAAACATTCATCAATGCTGCATCTGTTTCAGTGAATTTCCTGGT
ATGGAGTTTGTGAGGTTGCCATGTCAGCACTTTTTTTGCTGGAATTGCATGAAAACTTAT
TCCGACATGCATGTCAAGGAAGGTACAATCACCAAGCTTTTGTGCCCCGAGGCAAAATGT
GGAGGTATGATTCCTCCAGGTTTGCTAAAGCGGTTACTTGGTGAAGTGGAGTTTGAGCGC
TGGGAATCATTGATGTTACAGAAAACATTAGAATCAATGAAGGATGTCTGCTACTGCCCA
AGATGTGAAACAGTATGCATCGAGGATGAAGATCAGCATGCCCAATGTGCAAAATGCTTC
TTTAGTTTTTGTACACTGTGCAAGGAGAAGCGTCATGTTGGAGTTATATGCATGACACCA
GAAATGAAGCTTCTTATTTTGCAGGAGCGACAGAGTTCATCTCAATTGAAAGATAGCCAA
AGACAGCGTGAGAAAGAAATGATTAATGACATTCTCAGCATGCGGGAAATTCATCGTTCT
GCGAAGCAATGCCCTTCCTGTAAGATGGCTATCTCGCGAACTGAGGGCTGCAATAAAATG
GTGTGTGATAACTGTGGAGCATACTTTTGCTATCGCTGTAATCAGGCGATTGATGGATAT
GAGCACTTCAGGGATGGGAAATGTGAGCTTTTTCCACCAGAAGCAATTCAGATGTGGGAA
GAGAGGATTAATGCTCGCCAAGTTATCGGTCAGATTCAAGCTCAAATGCTTCCTAATCGT
GCTCATCCATGCCCTAATTGTCGCCAAATGAACGTAAAGGTTGGTAATAACAATCACATA
TTCTGCTGGGCATGTCAGAATCATTACTGTTACCTTTGTGGAAAGACGGTGAAGCGAAGC
TCCCAGCATTATGGACCTAAGGGCTGCAAACAACACACTGTTGATGAATAG